Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS13575

Experiment: Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS)
2,592,421	+	motA	LU632_RS13570	0.10	-3.2
2,592,495	-	motA	LU632_RS13570	0.19	+2.6
2,592,495	-	motA	LU632_RS13570	0.19	-0.6
2,592,561	-	motA	LU632_RS13570	0.26	+0.8
2,592,561	-	motA	LU632_RS13570	0.26	+1.4
2,592,568	+	motA	LU632_RS13570	0.27	+0.6
2,592,597	+	motA	LU632_RS13570	0.30	+0.6
2,592,597	+	motA	LU632_RS13570	0.30	-2.0
2,592,659	+	motA	LU632_RS13570	0.37	-0.7
2,592,660	-	motA	LU632_RS13570	0.37	+1.3
2,592,807	-	motA	LU632_RS13570	0.54	-0.0
2,592,828	+	motA	LU632_RS13570	0.56	+0.0
2,592,828	+	motA	LU632_RS13570	0.56	-1.9
2,592,828	+	motA	LU632_RS13570	0.56	-1.2
2,592,829	-	motA	LU632_RS13570	0.56	-0.7
2,592,829	-	motA	LU632_RS13570	0.56	-1.4
2,592,829	-	motA	LU632_RS13570	0.56	+0.8
2,592,833	-	motA	LU632_RS13570	0.57	+1.6
2,592,881	-	motA	LU632_RS13570	0.62	+0.0
2,592,993	-	motA	LU632_RS13570	0.75	-0.9
2,592,994	+	motA	LU632_RS13570	0.75	-1.0
2,593,009	+	motA	LU632_RS13570	0.76	-1.1
2,593,009	+	motA	LU632_RS13570	0.76	+0.1
2,593,009	+	motA	LU632_RS13570	0.76	+0.1
2,593,173	+				+0.5
2,593,174	-				-2.1
2,593,196	+				+0.3
2,593,196	+				+1.1
2,593,196	+				+0.4
2,593,197	-				-0.7
2,593,199	-				-0.3
2,593,199	-				+1.8
2,593,209	-				-2.4
2,593,228	+				-0.1
2,593,229	-				+0.1
2,593,229	-				+0.9
2,593,251	-				+1.9
2,593,496	+	flhC	LU632_RS13575	0.25	+1.2
2,593,497	-	flhC	LU632_RS13575	0.25	-0.4
2,593,538	+	flhC	LU632_RS13575	0.32	+0.4
2,593,539	-	flhC	LU632_RS13575	0.33	-0.2
2,593,641	-	flhC	LU632_RS13575	0.50	+1.5
2,593,641	-	flhC	LU632_RS13575	0.50	-1.1
2,593,641	-	flhC	LU632_RS13575	0.50	-0.4
2,593,661	+	flhC	LU632_RS13575	0.54	+0.4
2,593,662	-	flhC	LU632_RS13575	0.54	+2.2
2,593,698	-	flhC	LU632_RS13575	0.60	+0.6
2,593,698	-	flhC	LU632_RS13575	0.60	+0.5
2,593,736	+	flhC	LU632_RS13575	0.67	+0.4
2,593,736	+	flhC	LU632_RS13575	0.67	+0.4
2,593,737	-	flhC	LU632_RS13575	0.67	-1.4
2,593,769	+	flhC	LU632_RS13575	0.72	-0.4
2,593,769	+	flhC	LU632_RS13575	0.72	-0.1
2,593,798	+	flhC	LU632_RS13575	0.77	-0.2
2,593,798	+	flhC	LU632_RS13575	0.77	+0.3
2,593,798	+	flhC	LU632_RS13575	0.77	+0.7
2,593,824	+	flhC	LU632_RS13575	0.82	-0.6
2,593,824	+	flhC	LU632_RS13575	0.82	+1.5
2,593,825	-	flhC	LU632_RS13575	0.82	+1.0
2,593,873	-				-0.7
2,593,929	+				-0.1
2,593,929	+				-0.3
2,593,929	+				+2.3
2,593,930	-				+0.3
2,593,945	+				+0.2
2,594,021	+	flhD	LU632_RS13580	0.26	-0.3
2,594,022	-	flhD	LU632_RS13580	0.27	+0.9
2,594,022	-	flhD	LU632_RS13580	0.27	-0.6
2,594,185	+	flhD	LU632_RS13580	0.73	+0.9
2,594,186	-	flhD	LU632_RS13580	0.73	-0.2
2,594,207	-	flhD	LU632_RS13580	0.79	+0.3
2,594,207	-	flhD	LU632_RS13580	0.79	+0.1
2,594,207	-	flhD	LU632_RS13580	0.79	-0.4
2,594,233	-	flhD	LU632_RS13580	0.86	-0.1
2,594,233	-	flhD	LU632_RS13580	0.86	+0.7
2,594,243	-	flhD	LU632_RS13580	0.89	+0.8
2,594,250	+				-2.7
2,594,251	-				+0.6
2,594,251	-				-1.0
2,594,251	-				+0.3
2,594,254	+				+0.4
2,594,261	+				+1.6
2,594,261	+				-0.6
2,594,261	+				-0.1
2,594,262	-				+0.1
2,594,262	-				-1.8
2,594,294	+				+0.4
2,594,294	+				+0.4
2,594,295	-				-0.0
2,594,295	-				-1.0
2,594,295	-				+0.3
2,594,348	+				+0.5
2,594,348	+				-0.2
2,594,348	+				+1.1
2,594,348	+				+0.3
2,594,349	-				+1.0
2,594,349	-				+0.3
2,594,380	-				+0.5
2,594,428	+				+0.4
2,594,437	+				-2.1
2,594,437	+				-1.3
2,594,443	+				+1.0
2,594,443	+				-0.1
2,594,444	-				-0.1
2,594,461	+				+0.6
2,594,461	+				-0.1
2,594,462	-				-2.8
2,594,522	-				-0.7
2,594,549	+				-0.9
2,594,549	+				+0.7
2,594,549	+				+1.3
2,594,550	-				+0.2
2,594,550	-				-0.2
2,594,598	-				+0.1