Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS12785

Experiment: Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS)
2,433,032	+				-0.8
2,433,076	-				-1.1
2,433,077	-				+0.3
2,433,116	+				+0.4
2,433,116	+				-1.1
2,433,192	+		LU632_RS12780	0.32	-0.5
2,433,192	+		LU632_RS12780	0.32	+0.3
2,433,212	+		LU632_RS12780	0.39	+1.0
2,433,381	-				-0.4
2,433,461	+				+1.9
2,433,527	+				-3.6
2,433,528	-				-0.4
2,433,576	+				+0.1
2,433,580	+				+0.6
2,433,589	+				-0.1
2,433,615	-				-0.2
2,433,671	-				-0.7
2,433,674	+				-0.1
2,433,675	-				-2.2
2,433,675	-				-2.6
2,433,768	-				+2.5
2,433,771	-				+1.7
2,433,793	-				+1.4
2,433,806	+				+0.6
2,433,806	+				-1.2
2,433,806	+				+0.7
2,433,807	-				+0.3
2,433,857	+				+1.0
2,433,858	-				+0.2
2,433,858	-				+0.5
2,433,948	-				+0.5
2,434,034	+		LU632_RS12785	0.10	-0.2
2,434,064	+		LU632_RS12785	0.18	-0.9
2,434,065	-		LU632_RS12785	0.18	+1.2
2,434,109	+		LU632_RS12785	0.29	-3.2
2,434,109	+		LU632_RS12785	0.29	-0.5
2,434,110	-		LU632_RS12785	0.30	-1.1
2,434,110	-		LU632_RS12785	0.30	-2.1
2,434,179	-		LU632_RS12785	0.47	+0.5
2,434,185	+		LU632_RS12785	0.49	+1.3
2,434,198	+		LU632_RS12785	0.52	+0.5
2,434,374	-				+2.3
2,434,374	-				+1.5
2,434,397	-				+1.2
2,434,474	+				-1.5
2,434,830	-		LU632_RS12790	0.35	-0.1
2,434,832	-		LU632_RS12790	0.36	-1.0
2,434,939	+		LU632_RS12790	0.44	-0.7
2,434,942	+		LU632_RS12790	0.45	-3.6
2,434,943	-		LU632_RS12790	0.45	+3.8
2,434,943	-		LU632_RS12790	0.45	+1.5
2,434,959	+		LU632_RS12790	0.46	+1.8
2,434,959	+		LU632_RS12790	0.46	+0.3
2,434,959	+		LU632_RS12790	0.46	+1.7
2,435,018	-		LU632_RS12790	0.51	+1.3
2,435,105	-		LU632_RS12790	0.58	+2.1
2,435,190	+		LU632_RS12790	0.65	-0.7
2,435,191	-		LU632_RS12790	0.65	+0.4
2,435,218	-		LU632_RS12790	0.67	-0.9
2,435,369	+		LU632_RS12790	0.79	+1.1
2,435,369	+		LU632_RS12790	0.79	+0.8