Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS11900

Experiment: Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS)
2,250,726	-		LU632_RS11885	0.85	+2.9
2,250,756	-				+2.0
2,250,790	-		LU632_RS11890	0.13	+1.1
2,250,831	+		LU632_RS11890	0.34	+1.7
2,250,833	+		LU632_RS11890	0.35	+1.4
2,250,833	+		LU632_RS11890	0.35	-0.4
2,250,834	-		LU632_RS11890	0.35	-0.6
2,250,834	-		LU632_RS11890	0.35	+2.7
2,250,907	-		LU632_RS11890	0.72	-0.5
2,250,910	-		LU632_RS11890	0.73	+3.5
2,250,927	+		LU632_RS11890	0.82	-1.2
2,250,930	+		LU632_RS11890	0.83	+1.6
2,250,930	+		LU632_RS11890	0.83	+1.9
2,250,931	-		LU632_RS11890	0.84	+1.7
2,250,948	+				-0.5
2,251,004	+		LU632_RS11895	0.19	-2.2
2,251,103	+		LU632_RS11895	0.50	+1.9
2,251,142	-		LU632_RS11895	0.62	+0.3
2,251,166	-		LU632_RS11895	0.69	-0.1
2,251,166	-		LU632_RS11895	0.69	-1.2
2,251,209	-		LU632_RS11895	0.82	-0.9
2,251,219	+		LU632_RS11895	0.85	-1.8
2,251,285	+				+2.6
2,251,355	-				+0.9
2,251,381	+				-0.4
2,252,107	-				+1.6
2,252,361	-				+0.5
2,252,394	+				-3.0
2,252,394	+				+0.5
2,253,077	+		LU632_RS11905	0.22	-0.8