Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS11875

Experiment: Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS)
2,249,349	+				-0.7
2,249,350	-				+0.4
2,249,395	+				-1.3
2,249,396	-				+1.6
2,249,396	-				+3.9
2,249,396	-				+0.6
2,249,529	-				-3.5
2,249,634	+		LU632_RS11870	0.13	+1.1
2,249,708	+		LU632_RS11870	0.28	+0.4
2,249,708	+		LU632_RS11870	0.28	-1.5
2,249,754	+		LU632_RS11870	0.38	+0.9
2,249,755	-		LU632_RS11870	0.38	+0.5
2,249,790	+		LU632_RS11870	0.45	-1.4
2,249,790	+		LU632_RS11870	0.45	+0.3
2,249,790	+		LU632_RS11870	0.45	+2.6
2,249,791	-		LU632_RS11870	0.45	-1.5
2,249,796	-		LU632_RS11870	0.46	+0.1
2,249,845	-		LU632_RS11870	0.57	+1.1
2,249,846	+		LU632_RS11870	0.57	+0.8
2,249,937	-		LU632_RS11870	0.76	+0.2
2,249,991	+		LU632_RS11870	0.87	+1.2
2,249,992	-		LU632_RS11870	0.87	+0.4
2,249,997	+		LU632_RS11870	0.88	-1.2
2,249,997	+		LU632_RS11870	0.88	-0.1
2,250,039	-				-0.2
2,250,039	-				-0.4
2,250,167	+		LU632_RS11875	0.50	-0.6
2,250,167	+		LU632_RS11875	0.50	-0.9
2,250,167	+		LU632_RS11875	0.50	-1.2
2,250,202	+		LU632_RS11875	0.65	-0.0
2,250,209	+		LU632_RS11875	0.68	-2.3
2,250,215	+		LU632_RS11875	0.71	-1.6
2,250,237	-		LU632_RS11875	0.81	-1.1
2,250,239	+		LU632_RS11875	0.82	-2.7
2,250,332	+				+0.9
2,250,333	-				+2.0
2,250,726	-		LU632_RS11885	0.85	+2.9
2,250,756	-				+2.0
2,250,790	-		LU632_RS11890	0.13	+1.1
2,250,831	+		LU632_RS11890	0.34	+1.7
2,250,833	+		LU632_RS11890	0.35	+1.4
2,250,833	+		LU632_RS11890	0.35	-0.4
2,250,834	-		LU632_RS11890	0.35	-0.6
2,250,834	-		LU632_RS11890	0.35	+2.7
2,250,907	-		LU632_RS11890	0.72	-0.5
2,250,910	-		LU632_RS11890	0.73	+3.5
2,250,927	+		LU632_RS11890	0.82	-1.2
2,250,930	+		LU632_RS11890	0.83	+1.6
2,250,930	+		LU632_RS11890	0.83	+1.9
2,250,931	-		LU632_RS11890	0.84	+1.7
2,250,948	+				-0.5
2,251,004	+		LU632_RS11895	0.19	-2.2
2,251,103	+		LU632_RS11895	0.50	+1.9
2,251,142	-		LU632_RS11895	0.62	+0.3
2,251,166	-		LU632_RS11895	0.69	-0.1
2,251,166	-		LU632_RS11895	0.69	-1.2
2,251,209	-		LU632_RS11895	0.82	-0.9
2,251,219	+		LU632_RS11895	0.85	-1.8