Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS10040

Experiment: Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS)
1,919,940	+				+0.1
1,919,979	+				-0.3
1,920,000	+				-0.9
1,920,001	-				+2.2
1,920,003	-				-0.6
1,920,020	+				-0.7
1,920,093	+		LU632_RS10035	0.18	+0.6
1,920,097	-		LU632_RS10035	0.18	-1.5
1,920,097	-		LU632_RS10035	0.18	-0.6
1,920,097	-		LU632_RS10035	0.18	+0.0
1,920,102	-		LU632_RS10035	0.19	+0.1
1,920,153	-		LU632_RS10035	0.26	+1.3
1,920,153	-		LU632_RS10035	0.26	+0.1
1,920,216	-		LU632_RS10035	0.35	+0.2
1,920,216	-		LU632_RS10035	0.35	+1.2
1,920,317	+		LU632_RS10035	0.48	-0.6
1,920,318	-		LU632_RS10035	0.49	+0.2
1,920,318	-		LU632_RS10035	0.49	-1.1
1,920,350	-		LU632_RS10035	0.53	+0.5
1,920,367	-		LU632_RS10035	0.55	+1.1
1,920,367	-		LU632_RS10035	0.55	+0.9
1,920,406	-		LU632_RS10035	0.61	+0.9
1,920,439	+		LU632_RS10035	0.65	+0.8
1,920,441	+		LU632_RS10035	0.66	+1.7
1,920,441	+		LU632_RS10035	0.66	+1.4
1,920,441	+		LU632_RS10035	0.66	-0.7
1,920,442	-		LU632_RS10035	0.66	-0.4
1,920,442	-		LU632_RS10035	0.66	+1.4
1,920,541	+		LU632_RS10035	0.79	+0.3
1,920,542	-		LU632_RS10035	0.79	-2.8
1,920,584	+		LU632_RS10035	0.85	+1.2
1,920,619	+				-2.1
1,920,623	+				-1.3
1,920,624	-				-0.4
1,920,671	+				+0.4
1,920,671	+				-2.4
1,920,672	-				-0.0
1,920,691	+				+2.6
1,920,691	+				+0.2
1,920,692	-				+2.1
1,921,934	+				+1.1
1,921,937	+				+0.5
1,922,038	+				+0.9
1,922,039	-				-0.5
1,922,047	-				+0.9
1,922,061	+				-0.2
1,922,105	-				-1.7
1,922,126	-		LU632_RS10045	0.10	-0.8
1,922,136	+		LU632_RS10045	0.13	+1.1
1,922,137	-		LU632_RS10045	0.13	-1.5
1,922,141	-		LU632_RS10045	0.14	+1.2
1,922,242	+		LU632_RS10045	0.36	-0.4
1,922,243	-		LU632_RS10045	0.36	-1.1
1,922,243	-		LU632_RS10045	0.36	-2.4
1,922,243	-		LU632_RS10045	0.36	+0.0
1,922,243	-		LU632_RS10045	0.36	-1.1
1,922,285	-		LU632_RS10045	0.46	-1.8
1,922,289	+		LU632_RS10045	0.47	+1.1
1,922,290	-		LU632_RS10045	0.47	+0.1
1,922,367	+		LU632_RS10045	0.64	-1.1
1,922,526	+				-0.7
1,922,553	+				+2.5
1,922,554	-				-0.4
1,922,639	+				+1.3
1,922,639	+				-3.0
1,922,640	-				-0.3
1,922,685	-				-0.5
1,922,707	-				+2.6
1,922,763	+				-1.9
1,922,763	+				-1.6
1,922,763	+				-0.5
1,922,764	-				-2.2
1,922,764	-				-2.3
1,922,765	+				-1.6
1,922,765	+				-0.9
1,922,765	+				-1.5
1,922,765	+				-0.5
1,922,766	-				-2.0