Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS09180

Experiment: Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS)
1,729,143	+				-0.2
1,729,150	-				+3.4
1,729,168	+				-1.7
1,729,169	-				+1.5
1,729,169	-				-1.2
1,729,171	+				+0.3
1,729,600	-	moaA	LU632_RS09175	0.48	-0.4
1,729,632	+	moaA	LU632_RS09175	0.51	+1.1
1,729,632	+	moaA	LU632_RS09175	0.51	+1.3
1,729,632	+	moaA	LU632_RS09175	0.51	+1.0
1,729,632	+	moaA	LU632_RS09175	0.51	+0.9
1,729,632	+	moaA	LU632_RS09175	0.51	-0.7
1,729,632	+	moaA	LU632_RS09175	0.51	+0.2
1,729,653	+	moaA	LU632_RS09175	0.53	+2.4
1,729,654	-	moaA	LU632_RS09175	0.53	-1.9
1,729,698	+	moaA	LU632_RS09175	0.57	-0.0
1,729,985	+	moaA	LU632_RS09175	0.86	-2.6
1,730,123	-				-1.6
1,730,123	-				+1.7
1,730,159	+				-0.7
1,730,172	-				-1.9
1,730,217	-	moaB	LU632_RS09180	0.16	-0.2
1,730,410	+	moaB	LU632_RS09180	0.53	-0.5
1,730,431	+	moaB	LU632_RS09180	0.57	-0.3
1,730,431	+	moaB	LU632_RS09180	0.57	+4.7
1,730,431	+	moaB	LU632_RS09180	0.57	+0.3
1,730,432	-	moaB	LU632_RS09180	0.57	+0.6
1,730,432	-	moaB	LU632_RS09180	0.57	-1.3
1,730,432	-	moaB	LU632_RS09180	0.57	+0.4
1,730,432	-	moaB	LU632_RS09180	0.57	+1.2
1,730,553	-	moaB	LU632_RS09180	0.81	-0.1
1,730,697	-				+0.3
1,730,697	-				-3.3
1,730,890	+	moaC	LU632_RS09185	0.48	+0.3
1,731,033	+	moaC	LU632_RS09185	0.78	-2.2
1,731,033	+	moaC	LU632_RS09185	0.78	-0.4
1,731,034	-	moaC	LU632_RS09185	0.78	-1.0
1,731,038	+	moaC	LU632_RS09185	0.79	-0.1
1,731,039	-	moaC	LU632_RS09185	0.79	-1.6
1,731,039	-	moaC	LU632_RS09185	0.79	-1.6
1,731,039	-	moaC	LU632_RS09185	0.79	+0.8
1,731,039	-	moaC	LU632_RS09185	0.79	+1.8
1,731,093	-				-2.1
1,731,376	+				-0.7
1,731,376	+				+2.8
1,731,376	+				-1.2
1,731,377	-				+0.0
1,731,539	+	moaE	LU632_RS09195	0.29	-0.0