Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS08545

Experiment: Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS)
1,603,410	+				-1.0
1,603,483	-				-1.6
1,603,529	+				-0.4
1,603,530	-				-0.4
1,603,532	+				+1.9
1,603,574	+				-0.5
1,603,574	+				+1.5
1,603,574	+				+1.0
1,603,575	-				+0.9
1,603,575	-				+1.5
1,603,575	-				-1.6
1,603,661	+		LU632_RS08540	0.34	+1.8
1,603,726	+		LU632_RS08540	0.66	-1.9
1,603,901	+				+0.8
1,603,901	+				+0.8
1,603,901	+				+0.1
1,603,902	-				+0.2
1,603,902	-				+0.1
1,603,907	+				+0.4
1,603,907	+				+2.6
1,603,908	-				-2.6
1,603,908	-				-1.0
1,603,908	-				-2.8
1,603,924	+				+1.9
1,603,924	+				-1.8
1,603,924	+				+2.5
1,603,924	+				+0.2
1,603,924	+				+1.2
1,603,925	-				-0.1
1,603,955	+				+0.5
1,603,979	+				+2.9
1,603,998	+				+0.9
1,603,998	+				-0.7
1,603,998	+				+0.7
1,603,999	-				+0.1
1,603,999	-				-1.5
1,603,999	-				+0.6
1,603,999	-				+0.1
1,603,999	-				+1.2
1,603,999	-				+1.0
1,603,999	-				+0.2
1,604,068	-				+1.6
1,604,068	-				-2.5
1,604,069	+				-2.8
1,604,070	-				+0.5
1,604,070	-				+0.3
1,604,070	-				+1.2
1,604,070	-				+1.9
1,604,075	+				-1.6
1,604,075	+				+0.6
1,604,076	-				+0.2
1,604,188	+	sanA	LU632_RS08545	0.13	-3.3
1,604,345	+	sanA	LU632_RS08545	0.31	+1.9
1,604,395	-	sanA	LU632_RS08545	0.37	+0.4
1,604,403	+	sanA	LU632_RS08545	0.38	-0.6
1,604,426	+	sanA	LU632_RS08545	0.41	-0.7
1,604,427	-	sanA	LU632_RS08545	0.41	-2.1
1,604,500	-	sanA	LU632_RS08545	0.50	+0.4
1,604,536	+	sanA	LU632_RS08545	0.54	-0.9
1,604,536	+	sanA	LU632_RS08545	0.54	+0.7
1,604,536	+	sanA	LU632_RS08545	0.54	+1.6
1,604,536	+	sanA	LU632_RS08545	0.54	+1.2
1,604,536	+	sanA	LU632_RS08545	0.54	-0.9
1,604,537	-	sanA	LU632_RS08545	0.54	-0.7
1,604,537	-	sanA	LU632_RS08545	0.54	-0.4
1,604,638	-	sanA	LU632_RS08545	0.66	-2.1
1,604,639	+	sanA	LU632_RS08545	0.66	+0.5
1,604,675	+	sanA	LU632_RS08545	0.70	+0.2
1,604,676	-	sanA	LU632_RS08545	0.70	-0.2
1,604,694	+	sanA	LU632_RS08545	0.73	+1.8
1,604,697	-	sanA	LU632_RS08545	0.73	-0.6
1,604,697	-	sanA	LU632_RS08545	0.73	-1.2
1,604,730	-	sanA	LU632_RS08545	0.77	-0.9
1,604,730	-	sanA	LU632_RS08545	0.77	-2.9
1,604,732	+	sanA	LU632_RS08545	0.77	-0.1
1,604,740	-	sanA	LU632_RS08545	0.78	-0.9
1,604,740	-	sanA	LU632_RS08545	0.78	-1.0
1,604,740	-	sanA	LU632_RS08545	0.78	-0.2
1,604,742	+	sanA	LU632_RS08545	0.78	-0.5
1,604,743	-	sanA	LU632_RS08545	0.78	-0.6
1,604,759	+	sanA	LU632_RS08545	0.80	+0.7
1,604,896	-				-0.0
1,604,907	-				-1.9
1,604,920	+				+1.3
1,604,921	-				+0.4
1,605,072	+				-1.0
1,605,072	+				-0.5
1,605,073	-				-1.5
1,605,074	+				+0.3
1,605,154	-				+1.1
1,605,158	-				+0.5
1,605,163	+				-0.9
1,605,164	-				-2.6
1,605,308	-				-0.4
1,605,308	-				+3.2
1,605,308	-				+0.4
1,605,457	-		LU632_RS08550	0.18	-0.4
1,605,467	-		LU632_RS08550	0.19	+0.9
1,605,467	-		LU632_RS08550	0.19	+0.3
1,605,562	+		LU632_RS08550	0.24	-1.9