Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS06420

Experiment: Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS)
1,233,867	-				-1.6
1,233,867	-				+1.4
1,233,867	-				-1.1
1,233,963	+				-1.3
1,234,008	-				+0.6
1,234,084	+				+2.4
1,234,084	+				+0.2
1,234,087	+				+2.1
1,234,087	+				-0.3
1,234,101	+				+0.9
1,234,105	+				-0.2
1,234,125	+				+2.1
1,234,175	-				-1.8
1,234,177	-				+0.6
1,234,177	-				+2.0
1,234,181	+				+1.1
1,234,250	-		LU632_RS06415	0.11	+0.8
1,234,322	+		LU632_RS06415	0.45	-1.1
1,234,447	+				-2.9
1,234,447	+				+1.1
1,234,447	+				-0.9
1,234,465	+				-0.2
1,234,465	+				-1.5
1,234,465	+				-0.6
1,234,466	-				-0.2
1,234,466	-				+0.1
1,234,466	-				+0.3
1,234,466	-				-1.0
1,234,512	-				+0.1
1,234,514	+				-0.2
1,234,584	-				+3.0
1,234,584	-				+1.3
1,234,723	+				+1.3
1,234,735	-				+2.7
1,234,757	-				-1.1
1,234,778	+				+3.4
1,234,802	-				+0.6
1,234,802	-				-2.2
1,235,040	+	cysG	LU632_RS06420	0.17	-0.7
1,235,127	+	cysG	LU632_RS06420	0.23	+1.0
1,235,128	-	cysG	LU632_RS06420	0.24	+1.4
1,235,139	+	cysG	LU632_RS06420	0.24	-1.1
1,235,139	+	cysG	LU632_RS06420	0.24	-0.7
1,235,140	-	cysG	LU632_RS06420	0.24	-2.6
1,235,140	-	cysG	LU632_RS06420	0.24	-0.9
1,235,140	-	cysG	LU632_RS06420	0.24	-1.1
1,235,140	-	cysG	LU632_RS06420	0.24	-0.3
1,235,210	+	cysG	LU632_RS06420	0.29	-0.1
1,235,302	-	cysG	LU632_RS06420	0.36	+1.7
1,235,344	-	cysG	LU632_RS06420	0.39	+1.0
1,235,344	-	cysG	LU632_RS06420	0.39	+1.1
1,235,505	+	cysG	LU632_RS06420	0.50	+0.3
1,235,707	-	cysG	LU632_RS06420	0.64	-1.7
1,235,733	-	cysG	LU632_RS06420	0.66	-1.7
1,235,755	-	cysG	LU632_RS06420	0.68	-1.9
1,235,807	-	cysG	LU632_RS06420	0.71	+0.6
1,235,935	+	cysG	LU632_RS06420	0.81	-0.1
1,235,935	+	cysG	LU632_RS06420	0.81	-0.6
1,235,935	+	cysG	LU632_RS06420	0.81	-1.2
1,235,935	+	cysG	LU632_RS06420	0.81	+1.4
1,236,108	+				-0.8
1,236,108	+				+0.6
1,236,109	-				-1.9
1,236,109	-				+1.7
1,236,109	-				-2.0
1,236,267	+				-2.8
1,236,267	+				+1.3
1,236,268	-				-0.4
1,236,273	+				-0.9
1,236,319	+	cysD	LU632_RS06425	0.11	+0.8
1,236,320	-	cysD	LU632_RS06425	0.11	+0.5
1,236,320	-	cysD	LU632_RS06425	0.11	-0.5
1,236,363	+	cysD	LU632_RS06425	0.16	-2.8
1,236,363	+	cysD	LU632_RS06425	0.16	-0.5
1,236,401	+	cysD	LU632_RS06425	0.20	+2.1
1,236,402	-	cysD	LU632_RS06425	0.20	-0.6
1,236,402	-	cysD	LU632_RS06425	0.20	-0.4
1,236,402	-	cysD	LU632_RS06425	0.20	+0.5
1,236,559	-	cysD	LU632_RS06425	0.37	-0.9
1,236,595	+	cysD	LU632_RS06425	0.41	-2.1
1,236,664	+	cysD	LU632_RS06425	0.49	+0.8
1,236,726	+	cysD	LU632_RS06425	0.56	-1.8
1,236,727	-	cysD	LU632_RS06425	0.56	+0.5
1,236,730	+	cysD	LU632_RS06425	0.56	-0.6
1,236,730	+	cysD	LU632_RS06425	0.56	+1.0
1,236,730	+	cysD	LU632_RS06425	0.56	-0.5
1,236,730	+	cysD	LU632_RS06425	0.56	-0.8
1,236,730	+	cysD	LU632_RS06425	0.56	+0.5
1,236,731	-	cysD	LU632_RS06425	0.56	+0.7
1,236,731	-	cysD	LU632_RS06425	0.56	-0.1
1,236,731	-	cysD	LU632_RS06425	0.56	+0.5
1,236,748	-	cysD	LU632_RS06425	0.58	-1.2
1,236,825	+	cysD	LU632_RS06425	0.67	-1.8
1,236,844	+	cysD	LU632_RS06425	0.69	-0.3
1,237,143	+				-1.0
1,237,150	-				-1.9