Experiment: Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LU632_RS04305 and LU632_RS04310 are separated by 860 nucleotides LU632_RS04310 and LU632_RS04315 are separated by 495 nucleotides
LU632_RS04305: LU632_RS04305 - DNA primase, at 854,830 to 855,231
_RS04305
LU632_RS04310: LU632_RS04310 - IS3 family transposase, at 856,092 to 857,256
_RS04310
LU632_RS04315: LU632_RS04315 - hypothetical protein, at 857,752 to 857,970
_RS04315
Position (kb) 856
857
858 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 855.244 kb on - strand at 855.244 kb on - strand at 855.434 kb on - strand at 855.488 kb on - strand at 855.551 kb on - strand at 855.596 kb on - strand at 855.598 kb on + strand at 855.657 kb on - strand at 855.689 kb on + strand at 855.757 kb on + strand at 855.760 kb on + strand at 855.760 kb on + strand at 855.761 kb on - strand at 855.838 kb on + strand at 855.839 kb on - strand at 855.841 kb on + strand at 855.842 kb on - strand at 855.851 kb on + strand at 855.895 kb on + strand at 855.895 kb on + strand at 855.896 kb on - strand at 855.960 kb on + strand at 855.960 kb on + strand at 855.960 kb on + strand at 855.960 kb on + strand at 855.961 kb on - strand at 856.005 kb on - strand at 856.053 kb on + strand at 856.053 kb on + strand at 856.054 kb on - strand at 856.054 kb on - strand at 856.054 kb on - strand at 857.360 kb on + strand at 857.361 kb on - strand at 857.361 kb on - strand at 857.403 kb on + strand at 857.404 kb on - strand at 857.456 kb on + strand at 857.467 kb on + strand at 857.467 kb on + strand at 857.468 kb on - strand at 857.538 kb on - strand at 857.538 kb on - strand at 857.538 kb on - strand at 857.584 kb on + strand at 857.585 kb on - strand at 857.585 kb on - strand at 857.585 kb on - strand at 857.674 kb on + strand at 857.751 kb on + strand at 857.751 kb on + strand at 857.842 kb on + strand, within LU632_RS04315 at 857.852 kb on - strand, within LU632_RS04315 at 857.909 kb on + strand, within LU632_RS04315 at 857.909 kb on + strand, within LU632_RS04315 at 857.909 kb on + strand, within LU632_RS04315 at 857.910 kb on - strand, within LU632_RS04315 at 857.983 kb on - strand at 858.021 kb on - strand at 858.160 kb on + strand at 858.161 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS) remove 855,244 - -0.9 855,244 - -0.7 855,434 - -3.9 855,488 - +0.7 855,551 - +0.3 855,596 - -0.6 855,598 + +1.7 855,657 - +1.9 855,689 + +0.2 855,757 + -0.7 855,760 + -2.6 855,760 + +1.4 855,761 - -1.8 855,838 + +0.3 855,839 - -0.2 855,841 + -0.9 855,842 - +1.8 855,851 + -1.4 855,895 + +0.8 855,895 + -1.1 855,896 - -0.7 855,960 + -0.8 855,960 + -0.4 855,960 + +0.4 855,960 + +1.9 855,961 - +1.9 856,005 - +1.1 856,053 + +1.1 856,053 + +0.4 856,054 - -0.6 856,054 - -0.5 856,054 - +0.2 857,360 + +0.0 857,361 - -1.4 857,361 - +0.3 857,403 + +2.0 857,404 - +1.8 857,456 + +1.2 857,467 + +0.3 857,467 + +0.0 857,468 - -0.3 857,538 - -0.9 857,538 - -2.7 857,538 - -0.1 857,584 + -0.2 857,585 - -0.2 857,585 - +0.7 857,585 - -0.1 857,674 + -1.1 857,751 + +1.0 857,751 + +0.6 857,842 + LU632_RS04315 0.41 -0.6 857,852 - LU632_RS04315 0.46 -0.2 857,909 + LU632_RS04315 0.72 +1.2 857,909 + LU632_RS04315 0.72 -2.7 857,909 + LU632_RS04315 0.72 -1.1 857,910 - LU632_RS04315 0.72 +0.8 857,983 - -0.6 858,021 - -1.8 858,160 + -1.6 858,161 - -2.3
Or see this region's nucleotide sequence