Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS00670

Experiment: Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 2 Main Stem (TE-S-M2-MS)
137,073	-		LU632_RS00665	0.15	-1.3
137,109	-		LU632_RS00665	0.18	-2.5
137,219	-		LU632_RS00665	0.29	+1.3
137,243	+		LU632_RS00665	0.32	+0.4
137,376	+		LU632_RS00665	0.45	+1.0
137,417	-		LU632_RS00665	0.49	+1.9
137,435	+		LU632_RS00665	0.51	-0.3
137,439	+		LU632_RS00665	0.51	-1.4
137,439	+		LU632_RS00665	0.51	+0.2
137,439	+		LU632_RS00665	0.51	-1.8
137,440	-		LU632_RS00665	0.51	-1.5
137,651	-		LU632_RS00665	0.72	-1.4
137,651	-		LU632_RS00665	0.72	+2.2
137,652	+		LU632_RS00665	0.72	+2.3
137,772	-		LU632_RS00665	0.84	-1.3
137,805	-		LU632_RS00665	0.88	-3.4
137,840	+				+0.6
137,840	+				+0.6
137,913	-				-1.9
137,927	+				+2.3
137,927	+				-2.2
137,931	+				-1.4
137,932	-				+1.8
137,975	+				+1.0
138,188	+		LU632_RS00670	0.24	-0.7
138,280	+		LU632_RS00670	0.33	-2.2
138,371	+		LU632_RS00670	0.41	+0.7
138,371	+		LU632_RS00670	0.41	-2.8
138,372	-		LU632_RS00670	0.41	+0.3
138,393	+		LU632_RS00670	0.43	-1.0
138,579	-		LU632_RS00670	0.61	-0.3
138,677	+		LU632_RS00670	0.70	-0.2
138,758	-		LU632_RS00670	0.78	+0.2
138,883	+		LU632_RS00670	0.89	+1.1
138,884	-		LU632_RS00670	0.90	-1.0
138,884	-		LU632_RS00670	0.90	+1.5
138,884	-		LU632_RS00670	0.90	-0.8
138,900	+				+0.3
138,960	+				+0.1
138,960	+				+1.0
138,961	-				-0.4
138,977	+				+0.8
138,978	-				-2.0
139,082	-				-2.1
139,301	+	tssG	LU632_RS00675	0.22	+1.6
139,301	+	tssG	LU632_RS00675	0.22	-1.2
139,302	-	tssG	LU632_RS00675	0.22	+0.0
139,357	+	tssG	LU632_RS00675	0.28	-1.8
139,357	+	tssG	LU632_RS00675	0.28	+0.3
139,358	-	tssG	LU632_RS00675	0.28	+0.0
139,358	-	tssG	LU632_RS00675	0.28	+3.2
139,358	-	tssG	LU632_RS00675	0.28	+2.9
139,403	+	tssG	LU632_RS00675	0.32	+0.4
139,404	-	tssG	LU632_RS00675	0.32	+2.5
139,407	+	tssG	LU632_RS00675	0.33	-1.0
139,408	-	tssG	LU632_RS00675	0.33	-0.8
139,463	+	tssG	LU632_RS00675	0.38	-1.7
139,464	-	tssG	LU632_RS00675	0.38	-0.0
139,494	-	tssG	LU632_RS00675	0.41	+0.7
139,497	-	tssG	LU632_RS00675	0.41	+1.2
139,497	-	tssG	LU632_RS00675	0.41	-1.0
139,585	-	tssG	LU632_RS00675	0.50	+0.6
139,594	+	tssG	LU632_RS00675	0.51	+2.8
139,595	-	tssG	LU632_RS00675	0.51	-2.9
139,631	+	tssG	LU632_RS00675	0.54	+2.2
139,688	+	tssG	LU632_RS00675	0.60	-1.1
139,689	-	tssG	LU632_RS00675	0.60	-0.7
139,689	-	tssG	LU632_RS00675	0.60	+0.7
139,778	+	tssG	LU632_RS00675	0.69	-1.8
139,779	-	tssG	LU632_RS00675	0.69	-0.4
139,840	+	tssG	LU632_RS00675	0.75	+1.9
139,840	+	tssG	LU632_RS00675	0.75	+0.3
139,840	+	tssG	LU632_RS00675	0.75	+2.2
139,847	-	tssG	LU632_RS00675	0.76	+1.6
139,954	+	tssG	LU632_RS00675	0.86	-0.1
139,955	-	tssG	LU632_RS00675	0.86	+1.4