Experiment: Bas61
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt fepG and fepC overlap by 4 nucleotides fepC and fepE overlap by 4 nucleotides fepE and entF are separated by 216 nucleotides
BNILDI_21980: fepG - iron-enterobactin ABC transporter permease, at 4,418,600 to 4,419,592
fepG
BNILDI_21985: fepC - ferrienterobactin ABC transporter ATPase, at 4,419,589 to 4,420,404
fepC
BNILDI_21990: fepE - LPS O-antigen length regulator, at 4,420,401 to 4,421,534
fepE
BNILDI_21995: entF - enterobactin synthase multienzyme complex component, ATP-dependent, at 4,421,751 to 4,425,632
entF
Position (kb)
4420
4421
4422 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4419.499 kb on + strand at 4419.646 kb on + strand at 4419.648 kb on + strand at 4419.678 kb on - strand, within fepC at 4419.724 kb on - strand, within fepC at 4419.808 kb on + strand, within fepC at 4419.817 kb on - strand, within fepC at 4419.927 kb on + strand, within fepC at 4419.928 kb on - strand, within fepC at 4420.081 kb on - strand, within fepC at 4420.081 kb on - strand, within fepC at 4420.134 kb on - strand, within fepC at 4420.174 kb on - strand, within fepC at 4420.200 kb on + strand, within fepC at 4420.309 kb on + strand, within fepC at 4420.398 kb on + strand at 4420.407 kb on + strand at 4420.408 kb on - strand at 4420.408 kb on - strand at 4420.408 kb on - strand at 4420.408 kb on - strand at 4420.961 kb on + strand, within fepE at 4421.006 kb on + strand, within fepE at 4421.028 kb on - strand, within fepE at 4421.029 kb on + strand, within fepE at 4421.030 kb on - strand, within fepE at 4421.159 kb on - strand, within fepE at 4421.159 kb on - strand, within fepE at 4421.159 kb on - strand, within fepE at 4421.159 kb on - strand, within fepE at 4421.234 kb on + strand, within fepE at 4421.274 kb on - strand, within fepE at 4421.448 kb on + strand at 4421.839 kb on + strand at 4421.840 kb on - strand at 4421.840 kb on - strand at 4421.889 kb on - strand at 4421.889 kb on - strand at 4421.948 kb on + strand at 4421.948 kb on + strand at 4421.983 kb on + strand at 4421.984 kb on - strand at 4421.984 kb on - strand at 4421.984 kb on - strand at 4422.265 kb on - strand, within entF at 4422.265 kb on - strand, within entF at 4422.265 kb on - strand, within entF
Per-strain Table
Position Strand Gene LocusTag Fraction Bas61 remove 4,419,499 + -0.5 4,419,646 + -1.8 4,419,648 + -0.1 4,419,678 - fepC BNILDI_21985 0.11 -0.9 4,419,724 - fepC BNILDI_21985 0.17 -0.1 4,419,808 + fepC BNILDI_21985 0.27 -1.4 4,419,817 - fepC BNILDI_21985 0.28 +0.1 4,419,927 + fepC BNILDI_21985 0.41 -1.1 4,419,928 - fepC BNILDI_21985 0.42 +0.9 4,420,081 - fepC BNILDI_21985 0.60 -0.1 4,420,081 - fepC BNILDI_21985 0.60 +0.9 4,420,134 - fepC BNILDI_21985 0.67 +0.4 4,420,174 - fepC BNILDI_21985 0.72 -0.5 4,420,200 + fepC BNILDI_21985 0.75 +1.9 4,420,309 + fepC BNILDI_21985 0.88 -0.0 4,420,398 + +0.4 4,420,407 + -0.5 4,420,408 - -0.3 4,420,408 - -0.8 4,420,408 - +0.6 4,420,408 - -0.3 4,420,961 + fepE BNILDI_21990 0.49 -0.7 4,421,006 + fepE BNILDI_21990 0.53 +0.2 4,421,028 - fepE BNILDI_21990 0.55 +0.9 4,421,029 + fepE BNILDI_21990 0.55 -1.3 4,421,030 - fepE BNILDI_21990 0.55 +0.2 4,421,159 - fepE BNILDI_21990 0.67 -0.4 4,421,159 - fepE BNILDI_21990 0.67 +0.9 4,421,159 - fepE BNILDI_21990 0.67 +0.1 4,421,159 - fepE BNILDI_21990 0.67 +0.3 4,421,234 + fepE BNILDI_21990 0.73 -0.3 4,421,274 - fepE BNILDI_21990 0.77 +1.1 4,421,448 + -0.1 4,421,839 + +0.7 4,421,840 - -0.3 4,421,840 - +0.4 4,421,889 - -0.3 4,421,889 - +0.3 4,421,948 + +1.0 4,421,948 + +0.6 4,421,983 + +1.0 4,421,984 - -0.2 4,421,984 - +0.3 4,421,984 - +1.8 4,422,265 - entF BNILDI_21995 0.13 -0.2 4,422,265 - entF BNILDI_21995 0.13 -0.6 4,422,265 - entF BNILDI_21995 0.13 -0.5
Or see this region's nucleotide sequence