Strain Fitness in Escherichia coli ECRC62 around BNILDI_20435

Experiment: Bas61

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas61
4,115,641	+				+0.9
4,115,642	-				-0.1
4,115,642	-				-0.5
4,115,642	-				+0.3
4,115,660	-				-1.8
4,115,688	+				-0.7
4,115,688	+				-0.2
4,115,689	-				-0.5
4,115,689	-				+0.2
4,115,690	+				+0.4
4,115,690	+				-1.2
4,115,691	-				+0.1
4,115,691	-				+0.7
4,115,725	-				+0.8
4,115,729	-				+0.2
4,115,769	-				+2.8
4,115,993	-				+0.2
4,115,993	-				+0.2
4,116,040	+				-1.5
4,116,040	+				-1.5
4,116,043	+				-0.4
4,116,063	-				-0.5
4,116,066	-				+0.2
4,116,232	+				+1.8
4,116,534	+	clpA	BNILDI_20435	0.13	-0.3
4,116,951	+	clpA	BNILDI_20435	0.31	+0.2
4,116,952	-	clpA	BNILDI_20435	0.31	+0.3
4,116,953	+	clpA	BNILDI_20435	0.31	-1.0
4,117,131	+	clpA	BNILDI_20435	0.39	+1.6
4,117,228	-	clpA	BNILDI_20435	0.43	-0.2
4,117,362	-	clpA	BNILDI_20435	0.49	+0.8
4,117,489	-	clpA	BNILDI_20435	0.55	-0.3
4,117,553	+	clpA	BNILDI_20435	0.57	+0.4
4,117,906	-	clpA	BNILDI_20435	0.73	-0.2
4,117,930	-	clpA	BNILDI_20435	0.74	-0.7
4,118,019	+	clpA	BNILDI_20435	0.78	-1.8
4,118,112	+	clpA	BNILDI_20435	0.82	+0.1
4,118,149	-	clpA	BNILDI_20435	0.84	-0.1
4,118,149	-	clpA	BNILDI_20435	0.84	-0.6
4,118,159	+	clpA	BNILDI_20435	0.84	+0.2
4,118,160	-	clpA	BNILDI_20435	0.84	-1.2
4,118,160	-	clpA	BNILDI_20435	0.84	-0.5
4,118,160	-	clpA	BNILDI_20435	0.84	+1.0
4,118,341	-				-0.4
4,118,452	-				-0.4
4,118,494	+				-0.5
4,118,495	-				-0.3
4,118,572	-				+0.2
4,118,603	+	clpS	BNILDI_20440	0.15	+2.1
4,118,717	+	clpS	BNILDI_20440	0.51	-0.8
4,118,766	-	clpS	BNILDI_20440	0.66	+0.5
4,118,790	+	clpS	BNILDI_20440	0.74	+1.0
4,118,791	-	clpS	BNILDI_20440	0.74	-1.2
4,118,792	+	clpS	BNILDI_20440	0.74	+1.1
4,118,792	+	clpS	BNILDI_20440	0.74	+0.2
4,118,792	+	clpS	BNILDI_20440	0.74	+1.8
4,118,796	+	clpS	BNILDI_20440	0.75	-0.4
4,118,796	+	clpS	BNILDI_20440	0.75	+0.8
4,118,796	+	clpS	BNILDI_20440	0.75	-0.8
4,118,796	+	clpS	BNILDI_20440	0.75	+0.1
4,118,797	-	clpS	BNILDI_20440	0.76	+0.1
4,118,882	+				-0.2
4,118,883	-				+0.1
4,118,934	+				+0.2
4,118,935	-				-0.1
4,118,963	+				+0.8
4,118,964	-				-0.2
4,118,967	+				+0.2
4,118,967	+				+0.3
4,118,967	+				-0.2
4,118,968	-				+1.2
4,118,968	-				-1.2
4,118,968	-				+0.1
4,118,972	-				-0.5
4,118,972	-				-0.7
4,119,023	+	yljB	BNILDI_20445	0.67	-0.7
4,119,048	-				-0.4
4,119,089	+				-0.2
4,119,154	+				-0.5
4,119,155	-				+1.2
4,119,164	+				-2.3
4,119,165	-				-0.1
4,119,171	-				+0.2
4,119,215	-				-0.1
4,119,287	+	cspD	BNILDI_20450	0.40	+0.8
4,119,287	+	cspD	BNILDI_20450	0.40	+1.0
4,119,385	+	cspD	BNILDI_20450	0.84	+0.5
4,119,419	+				-0.7
4,119,420	-				-1.3
4,119,441	-				-0.8
4,119,447	+				-1.2
4,119,516	-				+0.8