Strain Fitness in Escherichia coli ECRC62 around BNILDI_17005

Experiment: Bas61

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas61
3,407,190	+	tqsA	BNILDI_16995	0.77	-0.2
3,407,301	-	tqsA	BNILDI_16995	0.88	-1.1
3,407,301	-	tqsA	BNILDI_16995	0.88	+2.7
3,407,305	-	tqsA	BNILDI_16995	0.88	-0.9
3,407,381	+				+0.6
3,407,382	-				-2.0
3,407,461	-				+0.7
3,407,677	+				+0.3
3,407,700	+				+1.7
3,407,746	+				+0.4
3,407,841	+				-2.1
3,407,841	+				+0.1
3,408,050	+	mdtJ	BNILDI_17000	0.58	-0.3
3,408,050	+	mdtJ	BNILDI_17000	0.58	-0.5
3,408,053	+	mdtJ	BNILDI_17000	0.59	+0.1
3,408,383	-	mdtI	BNILDI_17005	0.58	-1.1
3,408,405	+	mdtI	BNILDI_17005	0.65	-0.5
3,408,794	-	ydgD	BNILDI_17010	0.29	-0.6
3,408,795	+	ydgD	BNILDI_17010	0.29	-1.9
3,409,032	+	ydgD	BNILDI_17010	0.58	+0.2
3,409,032	+	ydgD	BNILDI_17010	0.58	-1.5
3,409,032	+	ydgD	BNILDI_17010	0.58	+0.0
3,409,033	-	ydgD	BNILDI_17010	0.58	+0.5
3,409,064	+	ydgD	BNILDI_17010	0.62	+0.1
3,409,173	-	ydgD	BNILDI_17010	0.75	+1.7
3,409,176	+	ydgD	BNILDI_17010	0.75	-0.3
3,409,177	-	ydgD	BNILDI_17010	0.75	-0.1
3,409,177	-	ydgD	BNILDI_17010	0.75	-0.0
3,409,343	+				+0.1
3,409,359	+				-0.6
3,409,374	-				+0.9
3,409,374	-				-1.4
3,409,396	+				+0.4
3,409,429	+				+2.3
3,409,432	+				-0.3
3,409,432	+				+0.5
3,409,516	-	ydgU	BNILDI_17015	0.44	-0.3