Strain Fitness in Escherichia coli ECRC62 around BNILDI_15835

Experiment: Bas61

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas61
3,176,037	+	manZ	BNILDI_15825	0.87	+0.1
3,176,037	+	manZ	BNILDI_15825	0.87	-1.4
3,176,037	+	manZ	BNILDI_15825	0.87	+0.2
3,176,070	+				+0.7
3,176,136	+				+1.5
3,176,378	+	manY	BNILDI_15830	0.27	+1.1
3,176,459	-	manY	BNILDI_15830	0.38	-0.2
3,176,715	+	manY	BNILDI_15830	0.70	+0.2
3,176,725	-	manY	BNILDI_15830	0.71	-0.5
3,176,809	-	manY	BNILDI_15830	0.81	-1.2
3,176,850	+	manY	BNILDI_15830	0.86	-0.6
3,176,851	-	manY	BNILDI_15830	0.87	-0.1
3,176,926	+				+0.4
3,176,926	+				+1.4
3,176,961	+				-1.2
3,176,978	+				+0.8
3,177,022	+				-1.1
3,177,243	+	manX	BNILDI_15835	0.23	+1.3
3,177,260	+	manX	BNILDI_15835	0.25	-0.0
3,177,261	-	manX	BNILDI_15835	0.25	-0.0
3,177,290	-	manX	BNILDI_15835	0.28	+0.2
3,177,304	+	manX	BNILDI_15835	0.29	+0.5
3,177,333	+	manX	BNILDI_15835	0.32	-0.7
3,177,333	+	manX	BNILDI_15835	0.32	+0.7
3,177,334	-	manX	BNILDI_15835	0.32	+0.6
3,177,389	+	manX	BNILDI_15835	0.38	+0.6
3,177,791	+	manX	BNILDI_15835	0.79	-0.0
3,177,816	-	manX	BNILDI_15835	0.82	+0.2
3,177,973	-				-1.2
3,178,007	-				+0.1
3,178,412	+		BNILDI_15840	0.73	+0.5
3,178,412	+		BNILDI_15840	0.73	-2.1
3,178,428	+		BNILDI_15840	0.81	-0.6
3,178,432	+		BNILDI_15840	0.83	-0.0
3,178,721	+	yoaE	BNILDI_15845	0.17	+0.6
3,178,721	+	yoaE	BNILDI_15845	0.17	-0.3
3,178,721	+	yoaE	BNILDI_15845	0.17	+0.4