Experiment: Bas61
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt flhB and flhA overlap by 8 nucleotides flhA and flhe overlap by 1 nucleotides flhe and yecT are separated by 119 nucleotides
BNILDI_15395: flhB - flagellar biosynthesis protein FlhB, at 3,095,674 to 3,096,822
flhB
BNILDI_15400: flhA - flagellar biosynthesis protein FlhA, at 3,096,815 to 3,098,893
flhA
BNILDI_15405: flhe - flagellar protein FlhE, at 3,098,893 to 3,099,285
flhe
BNILDI_15410: yecT - Uncharacterized protein YecT, at 3,099,405 to 3,099,893
yecT
Position (kb)
3096
3097
3098
3099 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 3095.880 kb on + strand, within flhB at 3095.880 kb on + strand, within flhB at 3095.881 kb on - strand, within flhB at 3095.881 kb on - strand, within flhB at 3095.881 kb on - strand, within flhB at 3095.883 kb on + strand, within flhB at 3095.884 kb on - strand, within flhB at 3096.014 kb on + strand, within flhB at 3096.112 kb on - strand, within flhB at 3096.112 kb on - strand, within flhB at 3096.333 kb on + strand, within flhB at 3096.333 kb on + strand, within flhB at 3096.474 kb on + strand, within flhB at 3096.495 kb on - strand, within flhB at 3096.594 kb on + strand, within flhB at 3096.762 kb on + strand at 3096.967 kb on + strand at 3096.968 kb on - strand at 3097.054 kb on + strand, within flhA at 3097.055 kb on - strand, within flhA at 3097.057 kb on + strand, within flhA at 3097.057 kb on + strand, within flhA at 3097.057 kb on + strand, within flhA at 3097.078 kb on + strand, within flhA at 3097.078 kb on + strand, within flhA at 3097.079 kb on - strand, within flhA at 3097.188 kb on + strand, within flhA at 3097.188 kb on + strand, within flhA at 3097.188 kb on + strand, within flhA at 3097.189 kb on - strand, within flhA at 3097.192 kb on + strand, within flhA at 3097.193 kb on - strand, within flhA at 3097.193 kb on - strand, within flhA at 3097.228 kb on + strand, within flhA at 3097.291 kb on + strand, within flhA at 3097.327 kb on + strand, within flhA at 3097.421 kb on - strand, within flhA at 3097.421 kb on - strand, within flhA at 3097.421 kb on - strand, within flhA at 3097.538 kb on + strand, within flhA at 3097.540 kb on + strand, within flhA at 3097.541 kb on - strand, within flhA at 3097.676 kb on - strand, within flhA at 3097.687 kb on + strand, within flhA at 3097.695 kb on + strand, within flhA at 3097.853 kb on - strand, within flhA at 3097.855 kb on + strand, within flhA at 3097.884 kb on + strand, within flhA at 3097.972 kb on + strand, within flhA at 3097.974 kb on + strand, within flhA at 3098.223 kb on + strand, within flhA at 3098.291 kb on - strand, within flhA at 3098.644 kb on - strand, within flhA at 3098.646 kb on + strand, within flhA at 3098.784 kb on + strand at 3098.820 kb on + strand at 3098.860 kb on + strand at 3098.892 kb on - strand at 3098.892 kb on - strand at 3098.904 kb on - strand at 3098.912 kb on + strand at 3098.912 kb on + strand at 3098.915 kb on + strand at 3098.916 kb on - strand at 3098.968 kb on - strand, within flhe at 3098.968 kb on - strand, within flhe at 3098.968 kb on - strand, within flhe at 3098.968 kb on - strand, within flhe at 3098.973 kb on - strand, within flhe at 3098.979 kb on + strand, within flhe at 3099.252 kb on - strand at 3099.314 kb on - strand at 3099.319 kb on + strand at 3099.371 kb on + strand at 3099.487 kb on - strand, within yecT at 3099.495 kb on - strand, within yecT at 3099.825 kb on + strand, within yecT at 3099.826 kb on - strand, within yecT at 3099.826 kb on - strand, within yecT at 3099.874 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas61 remove 3,095,880 + flhB BNILDI_15395 0.18 +1.7 3,095,880 + flhB BNILDI_15395 0.18 +0.9 3,095,881 - flhB BNILDI_15395 0.18 -0.3 3,095,881 - flhB BNILDI_15395 0.18 +2.0 3,095,881 - flhB BNILDI_15395 0.18 -1.1 3,095,883 + flhB BNILDI_15395 0.18 -0.0 3,095,884 - flhB BNILDI_15395 0.18 +1.4 3,096,014 + flhB BNILDI_15395 0.30 +1.9 3,096,112 - flhB BNILDI_15395 0.38 +0.6 3,096,112 - flhB BNILDI_15395 0.38 +1.1 3,096,333 + flhB BNILDI_15395 0.57 +0.9 3,096,333 + flhB BNILDI_15395 0.57 -0.1 3,096,474 + flhB BNILDI_15395 0.70 +3.0 3,096,495 - flhB BNILDI_15395 0.71 +0.4 3,096,594 + flhB BNILDI_15395 0.80 -1.7 3,096,762 + +0.8 3,096,967 + +0.4 3,096,968 - +1.7 3,097,054 + flhA BNILDI_15400 0.11 +3.9 3,097,055 - flhA BNILDI_15400 0.12 -0.9 3,097,057 + flhA BNILDI_15400 0.12 +0.7 3,097,057 + flhA BNILDI_15400 0.12 +1.6 3,097,057 + flhA BNILDI_15400 0.12 +1.6 3,097,078 + flhA BNILDI_15400 0.13 -0.6 3,097,078 + flhA BNILDI_15400 0.13 +0.9 3,097,079 - flhA BNILDI_15400 0.13 +2.4 3,097,188 + flhA BNILDI_15400 0.18 +0.6 3,097,188 + flhA BNILDI_15400 0.18 +1.7 3,097,188 + flhA BNILDI_15400 0.18 +0.5 3,097,189 - flhA BNILDI_15400 0.18 +1.5 3,097,192 + flhA BNILDI_15400 0.18 +2.6 3,097,193 - flhA BNILDI_15400 0.18 +1.0 3,097,193 - flhA BNILDI_15400 0.18 +0.7 3,097,228 + flhA BNILDI_15400 0.20 +0.4 3,097,291 + flhA BNILDI_15400 0.23 +5.4 3,097,327 + flhA BNILDI_15400 0.25 -0.8 3,097,421 - flhA BNILDI_15400 0.29 +2.7 3,097,421 - flhA BNILDI_15400 0.29 +1.1 3,097,421 - flhA BNILDI_15400 0.29 -1.9 3,097,538 + flhA BNILDI_15400 0.35 +0.5 3,097,540 + flhA BNILDI_15400 0.35 +1.7 3,097,541 - flhA BNILDI_15400 0.35 +2.1 3,097,676 - flhA BNILDI_15400 0.41 +1.1 3,097,687 + flhA BNILDI_15400 0.42 -0.6 3,097,695 + flhA BNILDI_15400 0.42 +1.0 3,097,853 - flhA BNILDI_15400 0.50 -0.3 3,097,855 + flhA BNILDI_15400 0.50 +1.7 3,097,884 + flhA BNILDI_15400 0.51 +1.9 3,097,972 + flhA BNILDI_15400 0.56 +0.4 3,097,974 + flhA BNILDI_15400 0.56 +2.0 3,098,223 + flhA BNILDI_15400 0.68 +1.1 3,098,291 - flhA BNILDI_15400 0.71 +1.3 3,098,644 - flhA BNILDI_15400 0.88 +0.7 3,098,646 + flhA BNILDI_15400 0.88 -0.9 3,098,784 + +1.4 3,098,820 + +2.3 3,098,860 + -0.6 3,098,892 - -0.2 3,098,892 - +0.5 3,098,904 - -1.0 3,098,912 + +1.1 3,098,912 + -1.7 3,098,915 + -1.1 3,098,916 - +0.1 3,098,968 - flhe BNILDI_15405 0.19 -1.1 3,098,968 - flhe BNILDI_15405 0.19 +1.7 3,098,968 - flhe BNILDI_15405 0.19 +0.1 3,098,968 - flhe BNILDI_15405 0.19 +0.1 3,098,973 - flhe BNILDI_15405 0.20 +0.7 3,098,979 + flhe BNILDI_15405 0.22 -0.3 3,099,252 - +0.1 3,099,314 - +0.6 3,099,319 + -1.0 3,099,371 + -1.4 3,099,487 - yecT BNILDI_15410 0.17 +0.3 3,099,495 - yecT BNILDI_15410 0.18 +0.4 3,099,825 + yecT BNILDI_15410 0.86 +0.4 3,099,826 - yecT BNILDI_15410 0.86 +0.1 3,099,826 - yecT BNILDI_15410 0.86 +0.6 3,099,874 - -0.7
Or see this region's nucleotide sequence