Strain Fitness in Escherichia coli ECRC62 around BNILDI_14665

Experiment: Bas61

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntwzy and BNILDI_14665 overlap by 4 nucleotidesBNILDI_14665 and wzx overlap by 28 nucleotides BNILDI_14660: wzy - O23 family O-antigen polymerase, at 2,961,844 to 2,962,869 wzy BNILDI_14665: BNILDI_14665 - GalNAc(5)-diNAcBac-PP-undecaprenol beta-1,3-glucosyltransferase, at 2,962,866 to 2,963,735 _14665 BNILDI_14670: wzx - O23 family O-antigen flippase, at 2,963,708 to 2,964,913 wzx Position (kb) 2962 2963 2964Strain fitness (log2 ratio) -1 0 1at 2962.724 kb on + strand, within wzyat 2962.729 kb on - strand, within wzy

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas61
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2,962,724 + wzy BNILDI_14660 0.86 -0.2
2,962,729 - wzy BNILDI_14660 0.86 +0.5

Or see this region's nucleotide sequence