Strain Fitness in Escherichia coli ECRC62 around BNILDI_11430

Experiment: Bas61

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBNILDI_11420 and BNILDI_11425 are separated by 315 nucleotidesBNILDI_11425 and BNILDI_11430 overlap by 26 nucleotides BNILDI_11420: BNILDI_11420 - DUF2157 domain-containing protein, at 2,299,971 to 2,300,717 _11420 BNILDI_11425: BNILDI_11425 - hypothetical protein, at 2,301,033 to 2,301,191 _11425 BNILDI_11430: BNILDI_11430 - hypothetical protein, at 2,301,166 to 2,301,726 _11430 Position (kb) 2301 2302Strain fitness (log2 ratio) -1 0 1 2at 2300.373 kb on + strand, within BNILDI_11420at 2300.374 kb on - strand, within BNILDI_11420at 2300.415 kb on - strand, within BNILDI_11420at 2300.589 kb on - strand, within BNILDI_11420at 2300.967 kb on + strandat 2301.344 kb on - strand, within BNILDI_11430at 2301.344 kb on - strand, within BNILDI_11430at 2301.405 kb on + strand, within BNILDI_11430at 2301.868 kb on - strandat 2302.021 kb on + strandat 2302.290 kb on - strandat 2302.409 kb on - strandat 2302.488 kb on + strandat 2302.491 kb on + strandat 2302.491 kb on + strandat 2302.535 kb on + strandat 2302.689 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas61
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2,300,373 + BNILDI_11420 0.54 -0.3
2,300,374 - BNILDI_11420 0.54 -0.0
2,300,415 - BNILDI_11420 0.59 -1.0
2,300,589 - BNILDI_11420 0.83 +1.2
2,300,967 + -0.6
2,301,344 - BNILDI_11430 0.32 +1.0
2,301,344 - BNILDI_11430 0.32 -1.2
2,301,405 + BNILDI_11430 0.43 +1.8
2,301,868 - -0.3
2,302,021 + +0.8
2,302,290 - +0.5
2,302,409 - -0.2
2,302,488 + -1.6
2,302,491 + -0.6
2,302,491 + +0.2
2,302,535 + +0.2
2,302,689 + +0.2

Or see this region's nucleotide sequence