Strain Fitness in Escherichia coli ECRC62 around BNILDI_07500

Experiment: Bas61

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBNILDI_07495 and BNILDI_07500 are separated by 113 nucleotidesBNILDI_07500 and BNILDI_07505 are separated by 464 nucleotides BNILDI_07495: BNILDI_07495 - Protein encoded within IS, at 1,495,444 to 1,495,719 _07495 BNILDI_07500: BNILDI_07500 - Transposase, at 1,495,833 to 1,496,048 _07500 BNILDI_07505: BNILDI_07505 - IclR family transcriptional regulator, at 1,496,513 to 1,497,277 _07505 Position (kb) 1495 1496 1497Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1494.876 kb on + strandat 1495.068 kb on - strandat 1495.086 kb on + strandat 1495.087 kb on - strandat 1495.106 kb on + strandat 1495.106 kb on + strandat 1495.107 kb on - strandat 1495.183 kb on - strandat 1495.183 kb on - strandat 1495.190 kb on + strandat 1495.219 kb on + strandat 1495.253 kb on - strandat 1495.253 kb on - strandat 1495.282 kb on - strandat 1495.304 kb on + strandat 1495.318 kb on + strandat 1495.336 kb on + strandat 1495.336 kb on + strandat 1495.337 kb on - strandat 1495.338 kb on + strandat 1495.338 kb on + strandat 1495.338 kb on + strandat 1495.339 kb on - strandat 1495.339 kb on - strandat 1495.339 kb on - strandat 1495.339 kb on - strandat 1495.408 kb on + strandat 1495.835 kb on - strandat 1495.866 kb on - strand, within BNILDI_07500at 1495.870 kb on - strand, within BNILDI_07500at 1495.922 kb on + strand, within BNILDI_07500at 1496.071 kb on + strandat 1496.071 kb on + strandat 1496.074 kb on - strandat 1496.204 kb on - strandat 1496.233 kb on - strandat 1496.243 kb on + strandat 1496.243 kb on + strandat 1496.277 kb on + strandat 1496.285 kb on - strandat 1496.423 kb on - strandat 1496.624 kb on - strand, within BNILDI_07505at 1496.765 kb on - strand, within BNILDI_07505at 1496.841 kb on - strand, within BNILDI_07505at 1496.864 kb on - strand, within BNILDI_07505at 1496.933 kb on - strand, within BNILDI_07505at 1496.974 kb on + strand, within BNILDI_07505at 1497.003 kb on - strand, within BNILDI_07505

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas61
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1,494,876 + +0.5
1,495,068 - -0.1
1,495,086 + +0.7
1,495,087 - -0.7
1,495,106 + +1.0
1,495,106 + -0.8
1,495,107 - +0.2
1,495,183 - +1.9
1,495,183 - +0.4
1,495,190 + -0.4
1,495,219 + +0.8
1,495,253 - +1.2
1,495,253 - -0.6
1,495,282 - -0.6
1,495,304 + +1.9
1,495,318 + +0.4
1,495,336 + -2.0
1,495,336 + +0.3
1,495,337 - +3.5
1,495,338 + -0.2
1,495,338 + -0.5
1,495,338 + -0.6
1,495,339 - -0.5
1,495,339 - -0.1
1,495,339 - -1.1
1,495,339 - -0.1
1,495,408 + -0.2
1,495,835 - -1.1
1,495,866 - BNILDI_07500 0.15 +0.2
1,495,870 - BNILDI_07500 0.17 -1.1
1,495,922 + BNILDI_07500 0.41 -1.3
1,496,071 + +0.3
1,496,071 + -1.8
1,496,074 - -1.9
1,496,204 - -1.7
1,496,233 - -0.3
1,496,243 + -0.3
1,496,243 + -0.5
1,496,277 + -0.9
1,496,285 - +0.3
1,496,423 - -0.3
1,496,624 - BNILDI_07505 0.15 -0.5
1,496,765 - BNILDI_07505 0.33 -1.7
1,496,841 - BNILDI_07505 0.43 -2.0
1,496,864 - BNILDI_07505 0.46 +0.9
1,496,933 - BNILDI_07505 0.55 -1.7
1,496,974 + BNILDI_07505 0.60 +0.9
1,497,003 - BNILDI_07505 0.64 +0.3

Or see this region's nucleotide sequence