Experiment: Bas61
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yjdP and phnP are separated by 146 nucleotides phnP and phnO are separated by 1 nucleotides phnO and phnN overlap by 14 nucleotides phnN and phnM overlap by 1 nucleotides
BNILDI_06535: yjdP - Uncharacterized protein YjdP, at 1,308,373 to 1,308,702
yjdP
BNILDI_06540: phnP - phosphonate metabolism protein PhnP, at 1,308,849 to 1,309,607
phnP
BNILDI_06545: phnO - aminoalkylphosphonate N-acetyltransferase, at 1,309,609 to 1,310,043
phnO
BNILDI_06550: phnN - ribose 1,5-bisphosphokinase, at 1,310,030 to 1,310,587
phnN
BNILDI_06555: phnM - alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase, at 1,310,587 to 1,311,723
phnM
Position (kb) 1309
1310
1311 Strain fitness (log2 ratio) -1
0
1 at 1308.692 kb on - strand at 1308.996 kb on - strand, within phnP at 1308.996 kb on - strand, within phnP at 1308.999 kb on + strand, within phnP at 1309.275 kb on - strand, within phnP at 1309.379 kb on - strand, within phnP at 1309.480 kb on - strand, within phnP at 1309.610 kb on + strand at 1309.758 kb on + strand, within phnO at 1309.973 kb on - strand, within phnO at 1310.120 kb on - strand, within phnN at 1310.138 kb on - strand, within phnN at 1310.138 kb on - strand, within phnN at 1310.138 kb on - strand, within phnN at 1310.139 kb on + strand, within phnN at 1310.263 kb on - strand, within phnN at 1310.361 kb on + strand, within phnN at 1310.361 kb on + strand, within phnN at 1310.361 kb on + strand, within phnN at 1310.496 kb on - strand, within phnN at 1310.602 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas61 remove 1,308,692 - +0.9 1,308,996 - phnP BNILDI_06540 0.19 +0.1 1,308,996 - phnP BNILDI_06540 0.19 -0.7 1,308,999 + phnP BNILDI_06540 0.20 -1.1 1,309,275 - phnP BNILDI_06540 0.56 -0.1 1,309,379 - phnP BNILDI_06540 0.70 -1.4 1,309,480 - phnP BNILDI_06540 0.83 -0.7 1,309,610 + -0.1 1,309,758 + phnO BNILDI_06545 0.34 +0.2 1,309,973 - phnO BNILDI_06545 0.84 +1.6 1,310,120 - phnN BNILDI_06550 0.16 -0.1 1,310,138 - phnN BNILDI_06550 0.19 -0.1 1,310,138 - phnN BNILDI_06550 0.19 -0.1 1,310,138 - phnN BNILDI_06550 0.19 -0.2 1,310,139 + phnN BNILDI_06550 0.20 -0.4 1,310,263 - phnN BNILDI_06550 0.42 -0.9 1,310,361 + phnN BNILDI_06550 0.59 +0.9 1,310,361 + phnN BNILDI_06550 0.59 -0.1 1,310,361 + phnN BNILDI_06550 0.59 -1.2 1,310,496 - phnN BNILDI_06550 0.84 -0.7 1,310,602 - -1.5
Or see this region's nucleotide sequence