Strain Fitness in Escherichia coli ECRC62 around BNILDI_00275

Experiment: Bas61

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas61
59,748	-	pepD	BNILDI_00270	0.36	+0.6
59,793	+	pepD	BNILDI_00270	0.39	-0.1
59,841	+	pepD	BNILDI_00270	0.43	-0.8
59,841	+	pepD	BNILDI_00270	0.43	-0.4
59,842	-	pepD	BNILDI_00270	0.43	-0.7
59,842	-	pepD	BNILDI_00270	0.43	+1.9
59,894	-	pepD	BNILDI_00270	0.46	-0.3
60,061	+	pepD	BNILDI_00270	0.58	-1.8
60,062	-	pepD	BNILDI_00270	0.58	-0.7
60,066	-	pepD	BNILDI_00270	0.58	-0.7
60,066	-	pepD	BNILDI_00270	0.58	+1.2
60,066	-	pepD	BNILDI_00270	0.58	+0.6
60,066	-	pepD	BNILDI_00270	0.58	+0.9
60,143	-	pepD	BNILDI_00270	0.63	-0.2
60,173	-	pepD	BNILDI_00270	0.65	-0.4
60,173	-	pepD	BNILDI_00270	0.65	+1.5
60,287	-	pepD	BNILDI_00270	0.73	+0.3
60,292	-	pepD	BNILDI_00270	0.74	-1.4
60,292	-	pepD	BNILDI_00270	0.74	-2.3
60,339	-	pepD	BNILDI_00270	0.77	+0.6
60,372	+	pepD	BNILDI_00270	0.79	-0.6
60,373	-	pepD	BNILDI_00270	0.79	+0.0
60,405	-	pepD	BNILDI_00270	0.81	+1.3
60,451	-	pepD	BNILDI_00270	0.84	+0.6
60,462	-	pepD	BNILDI_00270	0.85	-0.9
60,630	-				-0.1
60,675	-				-1.0
60,675	-				+0.1
60,679	-				-0.6
60,904	-	prfH	BNILDI_00275	0.28	+0.8
60,973	-	prfH	BNILDI_00275	0.39	+0.3
61,128	+	prfH	BNILDI_00275	0.64	+0.7
61,129	-	prfH	BNILDI_00275	0.64	-0.8
61,270	+	prfH	BNILDI_00275	0.87	+1.0
61,411	-				-0.1
61,411	-				+0.9
61,455	-				+1.5
61,455	-				+0.7
61,589	+	rtcB	BNILDI_00280	0.21	-0.1
61,635	-	rtcB	BNILDI_00280	0.26	+0.1
61,645	-	rtcB	BNILDI_00280	0.26	+0.1
61,657	+	rtcB	BNILDI_00280	0.27	-0.1
61,658	-	rtcB	BNILDI_00280	0.28	-0.4
61,658	-	rtcB	BNILDI_00280	0.28	-0.4
61,680	-	rtcB	BNILDI_00280	0.29	+0.3
61,815	+	rtcB	BNILDI_00280	0.41	+0.3
61,844	+	rtcB	BNILDI_00280	0.44	+0.2
61,881	-	rtcB	BNILDI_00280	0.47	+0.3
61,882	+	rtcB	BNILDI_00280	0.47	-0.0
61,882	+	rtcB	BNILDI_00280	0.47	+0.9
61,883	-	rtcB	BNILDI_00280	0.47	+0.1
61,948	-	rtcB	BNILDI_00280	0.53	+0.2
61,979	+	rtcB	BNILDI_00280	0.56	+0.8
62,213	-	rtcB	BNILDI_00280	0.76	-1.4
62,228	+	rtcB	BNILDI_00280	0.78	-0.7
62,341	-	rtcB	BNILDI_00280	0.87	-0.9