Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS21680

Experiment: Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2)
4,146,142	+	opgB	LU632_RS21670	0.79	-3.6
4,146,177	+	opgB	LU632_RS21670	0.81	+0.1
4,146,361	+	opgB	LU632_RS21670	0.88	-0.1
4,146,438	+				+1.3
4,146,573	+				+0.2
4,146,612	-				+0.4
4,146,789	-		LU632_RS21675	0.83	-0.7
4,146,955	+				+1.9
4,147,791	-				+1.3
4,147,797	-				-2.2
4,147,819	+				-0.2
4,147,819	+				-2.7
4,147,889	+		LU632_RS21685	0.17	-2.5
4,147,915	-		LU632_RS21685	0.24	+0.2
4,147,931	+		LU632_RS21685	0.29	+0.4
4,147,932	-		LU632_RS21685	0.29	-1.2
4,147,934	+		LU632_RS21685	0.29	+1.4
4,147,934	+		LU632_RS21685	0.29	-1.7
4,147,934	+		LU632_RS21685	0.29	-1.3
4,147,935	-		LU632_RS21685	0.30	+2.7
4,147,935	-		LU632_RS21685	0.30	-0.3
4,147,953	-		LU632_RS21685	0.35	-2.5
4,148,091	-		LU632_RS21685	0.74	-1.3
4,148,094	+		LU632_RS21685	0.75	+0.5
4,148,095	-		LU632_RS21685	0.75	+1.0
4,148,198	+				-0.2
4,148,198	+				-1.6
4,148,199	-				+0.8
4,148,245	+				-1.2
4,148,277	-				+0.8
4,148,287	-				+1.8
4,148,307	+				-0.4
4,148,307	+				-0.8
4,148,308	-				-1.4
4,148,308	-				+3.0
4,148,308	-				+1.3
4,148,321	+				+0.9
4,148,330	-				-0.7
4,148,513	-		LU632_RS21690	0.23	+0.1