Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS19760

Experiment: Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2)
3,751,637	-		LU632_RS19745	0.78	+0.0
3,751,637	-		LU632_RS19745	0.78	+1.6
3,751,640	+		LU632_RS19745	0.79	+0.5
3,751,641	-		LU632_RS19745	0.79	+2.9
3,751,705	-				-0.2
3,751,716	-				-2.7
3,751,750	+				+0.0
3,751,751	-				+0.1
3,751,754	+				+1.5
3,751,754	+				-1.6
3,751,754	+				-0.3
3,751,755	-				+0.6
3,751,802	+				+1.0
3,751,821	-				+0.7
3,751,886	+		LU632_RS19750	0.19	+1.1
3,751,887	-		LU632_RS19750	0.19	+0.1
3,752,183	+		LU632_RS19750	0.77	-2.3
3,752,184	-		LU632_RS19750	0.77	-0.9
3,754,012	+				+1.8
3,754,013	-				-1.2
3,754,013	-				+0.5
3,754,013	-				+0.4
3,754,031	-				-0.3
3,754,031	-				+0.4
3,754,052	+				-2.2
3,754,059	-				+0.9
3,754,093	-				+0.9
3,754,124	-				+0.7
3,754,130	+				+0.2
3,754,130	+				-0.5
3,754,135	-				+0.5
3,754,135	-				-0.3
3,754,160	+				-0.7
3,754,161	-				+0.7
3,754,161	-				+2.6
3,754,161	-				+0.5
3,754,161	-				-0.1
3,754,161	-				+1.4
3,754,249	+				-0.9
3,754,250	-				+0.8
3,754,255	+	lpxP	LU632_RS19765	0.10	-0.4
3,754,399	+	lpxP	LU632_RS19765	0.26	-0.7
3,754,559	+	lpxP	LU632_RS19765	0.43	-2.3
3,754,640	-	lpxP	LU632_RS19765	0.52	+1.0
3,754,787	-	lpxP	LU632_RS19765	0.68	+0.5