Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS17620

Experiment: Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2)
3,309,473	+	yejK	LU632_RS17610	0.58	+1.7
3,309,509	+	yejK	LU632_RS17610	0.62	+0.3
3,309,509	+	yejK	LU632_RS17610	0.62	+0.7
3,309,509	+	yejK	LU632_RS17610	0.62	-0.1
3,309,509	+	yejK	LU632_RS17610	0.62	+1.9
3,309,509	+	yejK	LU632_RS17610	0.62	-0.4
3,309,510	+	yejK	LU632_RS17610	0.62	+0.2
3,309,510	-	yejK	LU632_RS17610	0.62	-1.7
3,309,510	-	yejK	LU632_RS17610	0.62	+1.3
3,309,510	-	yejK	LU632_RS17610	0.62	+1.3
3,309,725	-	yejK	LU632_RS17610	0.83	+1.1
3,309,750	+	yejK	LU632_RS17610	0.86	+1.5
3,309,777	+	yejK	LU632_RS17610	0.89	+0.5
3,309,778	-	yejK	LU632_RS17610	0.89	+0.6
3,309,851	-				-0.1
3,309,891	+				-0.2
3,309,892	-				-0.8
3,309,894	+				+0.9
3,309,895	-				-1.1
3,309,908	+				-0.5
3,309,909	-				+0.1
3,309,909	-				+0.2
3,309,909	-				+0.1
3,309,964	-				-0.1
3,309,974	-				-1.1
3,310,051	+				-2.2
3,310,070	+				-1.5
3,310,168	+		LU632_RS17615	0.51	-4.5
3,310,168	+		LU632_RS17615	0.51	-4.6
3,312,244	+				-1.3
3,312,245	-				-0.6
3,312,248	+				-1.8
3,312,310	+				-0.7
3,312,335	+				+0.3
3,312,336	-				-1.4
3,312,374	+				+0.6
3,312,375	-				+0.6
3,312,375	-				+0.2
3,312,526	-				-0.1
3,312,624	+		LU632_RS17630	0.15	+0.4
3,312,683	-		LU632_RS17630	0.20	+1.5
3,312,806	-		LU632_RS17630	0.30	+0.7
3,312,806	-		LU632_RS17630	0.30	+0.8
3,312,844	-		LU632_RS17630	0.33	-1.2
3,312,862	+		LU632_RS17630	0.34	-2.7
3,312,863	-		LU632_RS17630	0.34	+0.1
3,312,907	-		LU632_RS17630	0.38	-0.5
3,312,951	+		LU632_RS17630	0.41	-0.3
3,312,989	-		LU632_RS17630	0.44	-1.7
3,313,002	+		LU632_RS17630	0.45	+0.5