Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS16245

Experiment: Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2)
3,074,615	+	nagE	LU632_RS16240	0.71	-0.1
3,074,650	-	nagE	LU632_RS16240	0.72	-0.9
3,074,696	+	nagE	LU632_RS16240	0.75	+1.8
3,074,696	+	nagE	LU632_RS16240	0.75	+1.3
3,074,839	-	nagE	LU632_RS16240	0.82	-0.8
3,075,000	+	nagE	LU632_RS16240	0.90	+0.1
3,075,000	+	nagE	LU632_RS16240	0.90	-2.4
3,075,000	+	nagE	LU632_RS16240	0.90	-2.8
3,075,001	-	nagE	LU632_RS16240	0.90	-3.4
3,075,045	+				-0.0
3,075,202	+				-1.4
3,075,202	+				-0.7
3,075,202	+				-0.1
3,075,242	+				-1.3
3,075,249	+				-0.4
3,075,477	+				+0.1
3,075,477	+				-0.4
3,075,526	+				+1.6
3,076,394	+				+1.9
3,076,438	+				-1.4
3,076,545	-	nagA	LU632_RS16250	0.13	-2.4
3,076,637	+	nagA	LU632_RS16250	0.21	-0.2
3,076,638	-	nagA	LU632_RS16250	0.21	-2.4
3,076,638	-	nagA	LU632_RS16250	0.21	-0.9
3,076,641	-	nagA	LU632_RS16250	0.22	-2.8
3,076,808	+	nagA	LU632_RS16250	0.36	-2.9
3,077,046	+	nagA	LU632_RS16250	0.57	-2.1
3,077,046	+	nagA	LU632_RS16250	0.57	+0.2
3,077,047	-	nagA	LU632_RS16250	0.57	-1.3
3,077,047	-	nagA	LU632_RS16250	0.57	-2.5
3,077,048	+	nagA	LU632_RS16250	0.57	-1.0
3,077,049	-	nagA	LU632_RS16250	0.57	-2.0
3,077,054	+	nagA	LU632_RS16250	0.58	-1.8
3,077,143	+	nagA	LU632_RS16250	0.66	-1.6
3,077,143	+	nagA	LU632_RS16250	0.66	+1.7