Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS10680

Experiment: Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2)
2,037,698	+		LU632_RS10675	0.82	-0.9
2,037,811	+		LU632_RS10675	0.86	-2.4
2,037,815	+		LU632_RS10675	0.86	-1.9
2,037,824	-		LU632_RS10675	0.86	+2.2
2,037,837	+		LU632_RS10675	0.87	-1.5
2,037,838	-		LU632_RS10675	0.87	+0.7
2,037,954	+				+0.5
2,038,029	+				+0.7
2,038,029	+				+1.1
2,038,029	+				-0.5
2,038,029	+				-0.7
2,038,029	+				-1.0
2,038,029	+				-0.5
2,038,029	+				+0.2
2,038,030	-				-2.6
2,038,030	-				+0.6
2,038,030	-				+0.2
2,038,030	-				-0.7
2,038,031	+				-1.6
2,038,031	+				-3.3
2,038,032	-				-1.4
2,038,054	+				+1.3
2,038,054	+				-0.2
2,038,075	+				+0.4
2,038,140	+				-1.1
2,038,141	-				+0.9
2,038,223	-				-0.7
2,038,233	+				-1.4
2,038,233	+				-1.5
2,038,234	-				-2.1
2,038,234	-				+0.2
2,038,277	-				+0.9
2,038,316	-				-1.4
2,038,316	-				+0.6
2,038,318	+				-0.6
2,038,336	+				+0.1
2,038,338	+				+1.3
2,038,353	+				-0.2
2,038,434	-				-1.3
2,038,434	-				-1.4
2,039,045	+				+1.9
2,039,218	+		LU632_RS10685	0.68	-0.6
2,039,266	+		LU632_RS10685	0.87	-0.3
2,039,352	-				-1.2
2,039,352	-				-0.5
2,039,353	+				+0.6
2,039,353	+				-3.7
2,039,354	-				+0.6
2,039,354	-				+1.1
2,039,428	+		LU632_RS10690	0.44	+0.6
2,039,524	-		LU632_RS10690	0.88	+1.0
2,039,527	+		LU632_RS10690	0.89	+0.8
2,039,527	+		LU632_RS10690	0.89	-1.5
2,039,554	+				-0.7
2,039,559	-				+0.0
2,039,559	-				+0.5
2,039,691	-				-2.8
2,039,794	-				-0.3
2,039,874	+				-1.0
2,039,874	+				+0.2
2,039,878	+				-0.1
2,039,878	+				-1.8
2,039,878	+				-1.2
2,039,878	+				-1.1
2,039,882	-				+1.9