Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS10230

Experiment: Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2)
1,954,417	-		LU632_RS10220	0.58	+0.8
1,954,508	-		LU632_RS10220	0.68	-2.9
1,954,509	+		LU632_RS10220	0.68	-0.0
1,954,509	+		LU632_RS10220	0.68	+0.0
1,954,510	-		LU632_RS10220	0.68	+1.1
1,954,561	-		LU632_RS10220	0.73	+0.8
1,954,642	-		LU632_RS10220	0.81	+1.3
1,954,647	+		LU632_RS10220	0.82	+0.5
1,954,648	-		LU632_RS10220	0.82	+0.9
1,954,699	-		LU632_RS10220	0.87	-2.3
1,954,772	+				-0.6
1,955,605	+				+0.3
1,955,727	+		LU632_RS10235	0.12	-1.6
1,955,728	-		LU632_RS10235	0.12	+1.4
1,955,733	+		LU632_RS10235	0.12	+0.6
1,955,734	-		LU632_RS10235	0.12	+0.2
1,955,806	-		LU632_RS10235	0.16	+1.3
1,955,807	+		LU632_RS10235	0.16	+1.1
1,955,807	+		LU632_RS10235	0.16	-2.2
1,955,807	+		LU632_RS10235	0.16	-2.7
1,955,807	+		LU632_RS10235	0.16	+1.5
1,955,808	-		LU632_RS10235	0.16	-0.3
1,955,808	-		LU632_RS10235	0.16	-0.0
1,955,863	-		LU632_RS10235	0.18	-0.4
1,955,863	-		LU632_RS10235	0.18	+1.4
1,955,998	-		LU632_RS10235	0.25	-0.8
1,956,048	+		LU632_RS10235	0.27	+0.4
1,956,048	+		LU632_RS10235	0.27	-2.2
1,956,048	+		LU632_RS10235	0.27	+2.5
1,956,049	-		LU632_RS10235	0.27	+1.1
1,956,049	-		LU632_RS10235	0.27	-0.1
1,956,238	+		LU632_RS10235	0.36	-0.2
1,956,238	+		LU632_RS10235	0.36	+0.8
1,956,239	-		LU632_RS10235	0.36	+0.2
1,956,331	+		LU632_RS10235	0.40	-0.1