Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS10195

Experiment: Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2)
1,949,907	-				+0.2
1,949,970	-				-2.2
1,949,974	+				-1.1
1,950,026	+				+1.2
1,950,058	+				-1.5
1,950,096	+				+1.2
1,950,711	-	uvrY	LU632_RS10190	0.86	-1.0
1,950,862	+				-0.5
1,950,862	+				+0.2
1,950,862	+				+0.7
1,950,862	+				+0.9
1,950,862	+				+1.1
1,950,863	-				-1.5
1,950,863	-				+2.3
1,950,876	+				-0.3
1,950,882	-				-1.2
1,950,887	-				+0.0
1,950,895	-				+0.7
1,950,901	-				-3.4
1,950,901	-				-1.2
1,950,982	+	uvrC	LU632_RS10195	0.10	-0.5
1,950,982	+	uvrC	LU632_RS10195	0.10	-2.5
1,950,996	-	uvrC	LU632_RS10195	0.11	+0.5
1,951,008	+	uvrC	LU632_RS10195	0.12	+1.6
1,951,008	+	uvrC	LU632_RS10195	0.12	+0.6
1,951,008	+	uvrC	LU632_RS10195	0.12	-0.6
1,951,009	-	uvrC	LU632_RS10195	0.12	+0.5
1,951,028	+	uvrC	LU632_RS10195	0.13	-3.2
1,951,042	+	uvrC	LU632_RS10195	0.14	+0.4
1,951,042	+	uvrC	LU632_RS10195	0.14	-2.6
1,951,043	-	uvrC	LU632_RS10195	0.14	-1.4
1,951,066	+	uvrC	LU632_RS10195	0.15	+0.3
1,951,066	+	uvrC	LU632_RS10195	0.15	+1.4
1,951,073	+	uvrC	LU632_RS10195	0.15	-0.8
1,951,073	+	uvrC	LU632_RS10195	0.15	+0.2
1,951,074	-	uvrC	LU632_RS10195	0.15	-0.1
1,951,223	+	uvrC	LU632_RS10195	0.23	+1.5
1,951,293	-	uvrC	LU632_RS10195	0.27	-1.3
1,951,355	-	uvrC	LU632_RS10195	0.31	-0.4
1,951,355	-	uvrC	LU632_RS10195	0.31	-1.5
1,951,587	+	uvrC	LU632_RS10195	0.43	+0.4
1,951,587	+	uvrC	LU632_RS10195	0.43	-0.2
1,951,587	+	uvrC	LU632_RS10195	0.43	+0.5
1,951,587	+	uvrC	LU632_RS10195	0.43	-1.5
1,951,588	-	uvrC	LU632_RS10195	0.43	-2.3
1,951,588	-	uvrC	LU632_RS10195	0.43	-2.3
1,951,588	-	uvrC	LU632_RS10195	0.43	+1.2
1,951,588	-	uvrC	LU632_RS10195	0.43	+1.4
1,951,620	-	uvrC	LU632_RS10195	0.45	+1.0
1,951,852	+	uvrC	LU632_RS10195	0.58	+1.2
1,951,990	-	uvrC	LU632_RS10195	0.65	+0.6
1,951,992	+	uvrC	LU632_RS10195	0.65	+1.4
1,951,998	+	uvrC	LU632_RS10195	0.66	+0.6
1,951,999	-	uvrC	LU632_RS10195	0.66	-0.0
1,951,999	-	uvrC	LU632_RS10195	0.66	+0.4
1,951,999	-	uvrC	LU632_RS10195	0.66	-0.8
1,951,999	-	uvrC	LU632_RS10195	0.66	+0.8
1,952,141	-	uvrC	LU632_RS10195	0.74	-1.2
1,952,163	+	uvrC	LU632_RS10195	0.75	+0.0
1,952,164	-	uvrC	LU632_RS10195	0.75	+1.4
1,952,207	+	uvrC	LU632_RS10195	0.77	-0.3
1,952,208	-	uvrC	LU632_RS10195	0.77	-1.5
1,952,388	+	uvrC	LU632_RS10195	0.87	+0.5
1,952,511	+				-0.8
1,952,512	-				-2.1
1,952,516	-				-1.5
1,952,516	-				-1.5
1,952,608	+				-1.5
1,952,616	-				+1.8
1,952,649	+				-3.3
1,952,649	+				-2.6
1,952,657	+				-2.0
1,952,657	+				-3.2
1,953,211	+				-0.6
1,953,211	+				-0.8
1,953,211	+				+2.2