Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS09690

Experiment: Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2)
1,835,066	+				+3.2
1,835,066	+				-0.8
1,835,091	+				+1.8
1,835,091	+				-1.4
1,835,092	-				-0.5
1,835,092	-				-1.2
1,835,123	-				+0.8
1,835,168	-	artP	LU632_RS09685	0.12	-2.3
1,835,169	+	artP	LU632_RS09685	0.12	+2.1
1,835,169	+	artP	LU632_RS09685	0.12	+0.4
1,835,170	-	artP	LU632_RS09685	0.13	-0.9
1,835,170	-	artP	LU632_RS09685	0.13	-1.2
1,835,170	-	artP	LU632_RS09685	0.13	-0.2
1,835,174	+	artP	LU632_RS09685	0.13	-2.2
1,835,468	+	artP	LU632_RS09685	0.53	+2.0
1,835,469	-	artP	LU632_RS09685	0.54	+0.9
1,835,536	-	artP	LU632_RS09685	0.63	+1.4
1,835,783	-				-0.2
1,835,879	+				-1.6
1,835,987	+				-1.9
1,835,987	+				+1.0
1,835,988	-				+1.0
1,836,073	-		LU632_RS09690	0.12	+0.3
1,836,103	+		LU632_RS09690	0.18	+0.8
1,836,138	+		LU632_RS09690	0.24	-0.2
1,836,138	+		LU632_RS09690	0.24	+0.2
1,836,138	+		LU632_RS09690	0.24	-0.6
1,836,138	+		LU632_RS09690	0.24	+1.4
1,836,139	-		LU632_RS09690	0.24	-2.9
1,836,159	+		LU632_RS09690	0.28	+0.1
1,836,295	-		LU632_RS09690	0.53	-0.2
1,836,317	+		LU632_RS09690	0.57	+1.1
1,836,318	-		LU632_RS09690	0.58	-0.5
1,836,319	+		LU632_RS09690	0.58	-0.5
1,836,320	-		LU632_RS09690	0.58	+1.4
1,836,335	+		LU632_RS09690	0.61	-0.1
1,836,404	+		LU632_RS09690	0.74	-0.3
1,836,473	+		LU632_RS09690	0.86	+1.1
1,836,493	-				+0.0
1,836,508	+				-0.3
1,836,509	-				+0.6
1,836,532	+				-1.6
1,836,532	+				+1.5
1,836,532	+				-0.7
1,836,657	+				+2.0
1,836,657	+				-0.6
1,836,658	-				-1.6
1,836,658	-				-0.7
1,836,755	+				+0.9
1,836,785	+				-2.2
1,836,804	-				+1.0
1,836,804	-				-0.8
1,836,834	-				-0.2
1,836,875	+				-1.0
1,836,876	-				-1.2
1,836,933	+				-0.0
1,836,933	+				+0.2
1,837,005	+				+1.5
1,837,026	+				+1.1
1,837,041	+				+0.9
1,837,123	-				-0.0
1,837,230	+				+1.0
1,837,231	-				-0.6
1,837,243	-				-0.9
1,837,243	-				-1.1
1,837,245	-				-1.9
1,837,284	-				+1.4
1,837,336	-				-0.2
1,837,345	+				-2.0
1,837,349	+				+0.2
1,837,350	-				+1.8
1,837,358	-				-1.2
1,837,401	+				-2.1
1,837,414	-				+1.6
1,837,414	-				-1.6
1,837,458	-				+0.5
1,837,458	-				-0.8
1,837,481	-				+1.2
1,837,481	-				+1.8
1,837,498	-				-0.0
1,837,518	+				-2.6