Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS06055

Experiment: Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2)
1,150,467	+		LU632_RS06050	0.72	-1.5
1,150,523	+		LU632_RS06050	0.74	+0.8
1,150,700	+		LU632_RS06050	0.82	-1.5
1,150,700	+		LU632_RS06050	0.82	-1.1
1,150,700	+		LU632_RS06050	0.82	+0.8
1,150,700	+		LU632_RS06050	0.82	+0.6
1,150,700	+		LU632_RS06050	0.82	-0.8
1,150,700	+		LU632_RS06050	0.82	-1.4
1,150,700	+		LU632_RS06050	0.82	+0.5
1,150,700	+		LU632_RS06050	0.82	+0.5
1,150,701	-		LU632_RS06050	0.82	+0.8
1,150,701	-		LU632_RS06050	0.82	-1.7
1,150,701	-		LU632_RS06050	0.82	+0.8
1,150,701	-		LU632_RS06050	0.82	-0.7
1,150,701	-		LU632_RS06050	0.82	+1.5
1,150,826	+		LU632_RS06050	0.88	+0.9
1,150,844	-		LU632_RS06050	0.89	-0.4
1,150,974	+				-0.9
1,151,157	+				+1.0
1,151,158	-				-2.9
1,151,158	-				+0.3
1,151,172	+				+0.7
1,151,173	-				-2.1
1,151,173	-				+0.0
1,151,178	+				-0.2
1,151,179	-				+0.5
1,151,179	-				+0.7
1,151,221	-				-0.1
1,151,221	-				+0.2
1,151,225	-				-1.9
1,151,225	-				-0.3
1,151,384	+				-1.6
1,151,385	-				-1.2
1,151,400	-				-2.3
1,151,444	+				+0.7
1,151,575	+				-0.2
1,151,634	+		LU632_RS06055	0.12	+0.4
1,151,787	+		LU632_RS06055	0.21	+1.5
1,151,831	-		LU632_RS06055	0.24	-0.6
1,152,066	+		LU632_RS06055	0.37	-0.3
1,152,072	-		LU632_RS06055	0.38	-1.7
1,152,072	-		LU632_RS06055	0.38	-0.8
1,152,072	-		LU632_RS06055	0.38	-2.8
1,152,085	+		LU632_RS06055	0.38	+0.4
1,152,086	-		LU632_RS06055	0.38	+0.8
1,152,130	-		LU632_RS06055	0.41	+0.6
1,152,142	+		LU632_RS06055	0.42	-0.7
1,152,142	+		LU632_RS06055	0.42	+0.7
1,152,143	-		LU632_RS06055	0.42	-0.2
1,152,143	-		LU632_RS06055	0.42	-0.1
1,152,173	+		LU632_RS06055	0.43	+0.7
1,152,173	+		LU632_RS06055	0.43	-1.3
1,152,261	+		LU632_RS06055	0.48	+0.8
1,152,262	-		LU632_RS06055	0.49	-1.0
1,152,271	-		LU632_RS06055	0.49	+1.5
1,152,357	-		LU632_RS06055	0.54	-2.4
1,152,438	-		LU632_RS06055	0.59	+0.6
1,152,438	-		LU632_RS06055	0.59	-0.8
1,152,552	+		LU632_RS06055	0.65	-0.2
1,152,552	+		LU632_RS06055	0.65	+0.1
1,152,557	-		LU632_RS06055	0.66	+0.8
1,152,716	-		LU632_RS06055	0.75	+0.3
1,152,716	-		LU632_RS06055	0.75	+0.2
1,152,742	+		LU632_RS06055	0.76	-0.1
1,152,743	-		LU632_RS06055	0.76	+0.2
1,152,782	+		LU632_RS06055	0.79	+3.7
1,152,818	+		LU632_RS06055	0.81	-0.4
1,152,824	+		LU632_RS06055	0.81	+0.9
1,152,825	-		LU632_RS06055	0.81	+0.4
1,152,825	-		LU632_RS06055	0.81	+0.8
1,152,952	+		LU632_RS06055	0.89	-0.3
1,152,954	+		LU632_RS06055	0.89	-0.4
1,152,954	+		LU632_RS06055	0.89	-1.9
1,152,954	+		LU632_RS06055	0.89	+1.5
1,152,954	+		LU632_RS06055	0.89	-1.0
1,152,955	-		LU632_RS06055	0.89	+0.4
1,152,957	+		LU632_RS06055	0.89	+0.4
1,152,958	-		LU632_RS06055	0.89	+0.7
1,152,958	-		LU632_RS06055	0.89	+0.3
1,152,961	+		LU632_RS06055	0.89	-0.7
1,152,961	+		LU632_RS06055	0.89	-1.4
1,152,961	+		LU632_RS06055	0.89	-0.9
1,152,961	+		LU632_RS06055	0.89	-0.2
1,152,961	+		LU632_RS06055	0.89	-0.8
1,152,962	-		LU632_RS06055	0.89	+0.8
1,152,962	-		LU632_RS06055	0.89	+0.1
1,153,101	+				-1.0
1,153,101	+				+0.9
1,153,101	+				-0.1
1,153,101	+				+0.6
1,153,102	-				+2.7
1,153,102	-				-0.4
1,153,126	+				+0.2
1,153,131	+				-0.2
1,153,279	-				-1.1
1,153,291	+				+0.7
1,153,296	+				-0.2
1,153,296	+				-0.1
1,153,296	+				-0.1
1,153,317	+				-0.1
1,153,474	+				+0.0
1,153,520	+				+0.3
1,153,609	+				-0.3
1,153,609	+				+0.6
1,153,609	+				-1.1
1,153,615	-				+0.2
1,153,657	+				+0.3
1,153,697	-				+1.7
1,153,697	-				-0.3
1,153,775	-				+1.9
1,153,793	+				-0.6
1,153,793	+				-0.1
1,153,793	+				+1.5
1,153,794	-				+0.2
1,153,943	-		LU632_RS06060	0.17	-2.1
1,153,979	-		LU632_RS06060	0.29	-0.1
1,154,058	-		LU632_RS06060	0.54	-0.7