Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS05445

Experiment: Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 2 Petiole 2 (TE-S-M2-P2)
1,051,522	+				+0.7
1,051,704	+	hemW	LU632_RS05445	0.12	-0.0
1,051,720	-	hemW	LU632_RS05445	0.13	-1.7
1,051,860	+	hemW	LU632_RS05445	0.25	+0.6
1,051,971	-	hemW	LU632_RS05445	0.35	+0.5
1,051,971	-	hemW	LU632_RS05445	0.35	+0.5
1,052,010	-	hemW	LU632_RS05445	0.38	-0.9
1,052,024	+	hemW	LU632_RS05445	0.39	-0.4
1,052,025	-	hemW	LU632_RS05445	0.39	+0.5
1,052,246	-	hemW	LU632_RS05445	0.58	-2.5
1,052,246	-	hemW	LU632_RS05445	0.58	-1.0
1,052,250	+	hemW	LU632_RS05445	0.59	-2.0
1,052,251	-	hemW	LU632_RS05445	0.59	+0.2
1,052,251	-	hemW	LU632_RS05445	0.59	+0.1
1,052,370	+	hemW	LU632_RS05445	0.69	+0.5
1,052,370	+	hemW	LU632_RS05445	0.69	-1.1
1,052,370	+	hemW	LU632_RS05445	0.69	+1.0
1,052,554	+	hemW	LU632_RS05445	0.85	-2.0
1,052,554	+	hemW	LU632_RS05445	0.85	-0.4
1,052,554	+	hemW	LU632_RS05445	0.85	-0.4
1,052,555	-	hemW	LU632_RS05445	0.85	-2.4
1,052,555	-	hemW	LU632_RS05445	0.85	-2.0
1,052,555	-	hemW	LU632_RS05445	0.85	-0.5
1,052,555	-	hemW	LU632_RS05445	0.85	+1.0
1,052,555	-	hemW	LU632_RS05445	0.85	-0.1
1,052,571	+	hemW	LU632_RS05445	0.86	+0.5
1,052,572	-	hemW	LU632_RS05445	0.86	+1.7
1,052,611	+	hemW	LU632_RS05445	0.90	-0.7
1,052,611	+	hemW	LU632_RS05445	0.90	+0.3
1,052,611	+	hemW	LU632_RS05445	0.90	-1.3
1,052,615	+				+0.8
1,052,616	-				+1.1
1,052,616	-				-0.8
1,052,666	+				-0.1
1,052,695	-				+0.6
1,052,700	+				-1.2
1,052,702	+				+0.8
1,052,703	-				+0.5
1,052,853	+		LU632_RS05450	0.22	+0.7
1,053,057	+		LU632_RS05450	0.56	-0.5
1,053,070	-		LU632_RS05450	0.58	+0.6
1,053,070	-		LU632_RS05450	0.58	+0.3
1,053,070	-		LU632_RS05450	0.58	-0.6
1,053,319	+				-0.8
1,053,391	-				+2.8
1,053,391	-				-0.3
1,053,400	+				-0.1
1,053,400	+				-1.3
1,053,401	-				-0.2
1,053,401	-				-0.6
1,053,401	-				+0.0
1,053,402	+				-2.0
1,053,402	+				+0.1
1,053,402	+				+2.6
1,053,402	+				+0.8
1,053,402	+				-2.0
1,053,403	-				+0.9
1,053,403	-				-0.8
1,053,403	-				-2.8
1,053,403	-				-0.1
1,053,403	-				-0.2
1,053,403	-				+1.0
1,053,403	-				-0.4
1,053,403	-				-0.6
1,053,403	-				-0.1
1,053,403	-				-0.1
1,053,440	-		LU632_RS05455	0.16	-2.0
1,053,457	+		LU632_RS05455	0.19	+0.5
1,053,458	-		LU632_RS05455	0.20	-0.8
1,053,458	-		LU632_RS05455	0.20	-1.1
1,053,461	-		LU632_RS05455	0.20	-0.1
1,053,508	-		LU632_RS05455	0.29	+0.5
1,053,508	-		LU632_RS05455	0.29	-0.1
1,053,680	+		LU632_RS05455	0.60	+0.3
1,053,680	+		LU632_RS05455	0.60	+0.5
1,053,681	-		LU632_RS05455	0.60	-1.1
1,053,693	+		LU632_RS05455	0.62	-2.3