Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABI39_RS02735 and ABI39_RS02740 are separated by 66 nucleotides ABI39_RS02740 and ABI39_RS02745 are separated by 131 nucleotides ABI39_RS02745 and ABI39_RS02750 are separated by 36 nucleotides ABI39_RS02750 and ABI39_RS02755 are separated by 72 nucleotides
ABI39_RS02735: ABI39_RS02735 - acetate kinase, at 791,150 to 792,346
_RS02735
ABI39_RS02740: ABI39_RS02740 - UDP-2,3-diacylglucosamine diphosphatase, at 792,413 to 793,180
_RS02740
ABI39_RS02745: ABI39_RS02745 - DUF59 domain-containing protein, at 793,312 to 793,632
_RS02745
ABI39_RS02750: ABI39_RS02750 - DNA repair protein RadC, at 793,669 to 794,358
_RS02750
ABI39_RS02755: ABI39_RS02755 - glycosyltransferase, at 794,431 to 795,420
_RS02755
Position (kb) 793
794 Strain fitness (log2 ratio) -2
-1
0
1
2 at 792.341 kb on - strand at 792.368 kb on - strand at 792.400 kb on + strand at 792.400 kb on + strand at 793.199 kb on - strand at 793.490 kb on - strand, within ABI39_RS02745 at 793.496 kb on - strand, within ABI39_RS02745 at 793.525 kb on - strand, within ABI39_RS02745 at 793.545 kb on - strand, within ABI39_RS02745 at 793.547 kb on - strand, within ABI39_RS02745 at 793.549 kb on - strand, within ABI39_RS02745 at 793.574 kb on - strand, within ABI39_RS02745 at 793.592 kb on - strand, within ABI39_RS02745 at 793.633 kb on - strand at 793.691 kb on + strand at 793.695 kb on + strand at 793.697 kb on + strand at 793.720 kb on - strand at 793.738 kb on + strand, within ABI39_RS02750 at 793.739 kb on - strand, within ABI39_RS02750 at 793.739 kb on - strand, within ABI39_RS02750 at 793.797 kb on + strand, within ABI39_RS02750 at 793.919 kb on - strand, within ABI39_RS02750 at 793.924 kb on + strand, within ABI39_RS02750 at 793.926 kb on + strand, within ABI39_RS02750 at 793.937 kb on - strand, within ABI39_RS02750 at 794.044 kb on - strand, within ABI39_RS02750 at 794.122 kb on + strand, within ABI39_RS02750 at 794.130 kb on + strand, within ABI39_RS02750 at 794.387 kb on - strand at 794.554 kb on + strand, within ABI39_RS02755
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 792,341 - +0.5 792,368 - +0.1 792,400 + +0.2 792,400 + +0.4 793,199 - +2.2 793,490 - ABI39_RS02745 0.55 -1.0 793,496 - ABI39_RS02745 0.57 -0.9 793,525 - ABI39_RS02745 0.66 -1.5 793,545 - ABI39_RS02745 0.73 -2.1 793,547 - ABI39_RS02745 0.73 -1.3 793,549 - ABI39_RS02745 0.74 -0.9 793,574 - ABI39_RS02745 0.82 -1.4 793,592 - ABI39_RS02745 0.87 -1.9 793,633 - -0.5 793,691 + -0.4 793,695 + -1.2 793,697 + -0.4 793,720 - +0.5 793,738 + ABI39_RS02750 0.10 +0.0 793,739 - ABI39_RS02750 0.10 +0.3 793,739 - ABI39_RS02750 0.10 +0.1 793,797 + ABI39_RS02750 0.19 -0.1 793,919 - ABI39_RS02750 0.36 +0.0 793,924 + ABI39_RS02750 0.37 +0.5 793,926 + ABI39_RS02750 0.37 -0.2 793,937 - ABI39_RS02750 0.39 -0.3 794,044 - ABI39_RS02750 0.54 -0.3 794,122 + ABI39_RS02750 0.66 -0.2 794,130 + ABI39_RS02750 0.67 +0.1 794,387 - -0.2 794,554 + ABI39_RS02755 0.12 -1.1
Or see this region's nucleotide sequence