Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_16565

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
3,638,207	+	cyoE	OKGIIK_16555	0.70	-0.9
3,638,207	+	cyoE	OKGIIK_16555	0.70	+0.3
3,638,207	+	cyoE	OKGIIK_16555	0.70	-1.3
3,638,207	+	cyoE	OKGIIK_16555	0.70	-0.1
3,638,207	+	cyoE	OKGIIK_16555	0.70	-0.7
3,638,207	+	cyoE	OKGIIK_16555	0.70	-0.7
3,638,207	+	cyoE	OKGIIK_16555	0.70	-1.0
3,638,207	+	cyoE	OKGIIK_16555	0.70	-0.5
3,638,208	-	cyoE	OKGIIK_16555	0.71	-0.1
3,638,208	-	cyoE	OKGIIK_16555	0.71	-0.3
3,638,270	+	cyoE	OKGIIK_16555	0.77	-1.0
3,638,270	+	cyoE	OKGIIK_16555	0.77	-1.9
3,638,270	+	cyoE	OKGIIK_16555	0.77	-1.5
3,638,270	+	cyoE	OKGIIK_16555	0.77	+0.3
3,638,271	-	cyoE	OKGIIK_16555	0.78	-1.5
3,638,271	-	cyoE	OKGIIK_16555	0.78	-1.3
3,638,309	+	cyoE	OKGIIK_16555	0.82	-0.6
3,638,309	+	cyoE	OKGIIK_16555	0.82	-1.3
3,638,309	+	cyoE	OKGIIK_16555	0.82	+1.0
3,638,309	+	cyoE	OKGIIK_16555	0.82	-0.6
3,638,309	+	cyoE	OKGIIK_16555	0.82	-1.8
3,638,309	+	cyoE	OKGIIK_16555	0.82	+0.3
3,638,310	-	cyoE	OKGIIK_16555	0.82	-0.4
3,638,310	-	cyoE	OKGIIK_16555	0.82	-2.5
3,638,310	-	cyoE	OKGIIK_16555	0.82	-0.7
3,638,310	-	cyoE	OKGIIK_16555	0.82	-0.3
3,638,310	-	cyoE	OKGIIK_16555	0.82	+0.0
3,638,312	+	cyoE	OKGIIK_16555	0.82	+0.3
3,638,312	+	cyoE	OKGIIK_16555	0.82	-1.5
3,638,312	+	cyoE	OKGIIK_16555	0.82	+1.0
3,638,313	-	cyoE	OKGIIK_16555	0.82	-1.8
3,638,313	-	cyoE	OKGIIK_16555	0.82	-1.8
3,638,348	+	cyoE	OKGIIK_16555	0.86	-0.1
3,638,348	+	cyoE	OKGIIK_16555	0.86	-1.5
3,638,348	+	cyoE	OKGIIK_16555	0.86	+0.1
3,638,349	-	cyoE	OKGIIK_16555	0.86	-1.0
3,638,349	-	cyoE	OKGIIK_16555	0.86	-0.7
3,638,349	-	cyoE	OKGIIK_16555	0.86	-0.1
3,638,349	-	cyoE	OKGIIK_16555	0.86	+0.0
3,638,349	-	cyoE	OKGIIK_16555	0.86	-1.4
3,638,369	+	cyoE	OKGIIK_16555	0.88	+0.3
3,638,369	+	cyoE	OKGIIK_16555	0.88	-1.3
3,638,369	+	cyoE	OKGIIK_16555	0.88	-0.4
3,638,369	+	cyoE	OKGIIK_16555	0.88	-0.7
3,638,369	+	cyoE	OKGIIK_16555	0.88	+0.7
3,638,370	-	cyoE	OKGIIK_16555	0.88	-1.7
3,638,370	-	cyoE	OKGIIK_16555	0.88	-1.4
3,638,370	-	cyoE	OKGIIK_16555	0.88	-2.5
3,638,370	-	cyoE	OKGIIK_16555	0.88	-2.3
3,638,370	-	cyoE	OKGIIK_16555	0.88	+1.2
3,638,370	-	cyoE	OKGIIK_16555	0.88	+0.1
3,638,370	-	cyoE	OKGIIK_16555	0.88	+0.7
3,638,370	-	cyoE	OKGIIK_16555	0.88	+0.9
3,638,370	-	cyoE	OKGIIK_16555	0.88	-1.8
3,638,381	+	cyoE	OKGIIK_16555	0.90	-2.0
3,638,381	+	cyoE	OKGIIK_16555	0.90	-0.5
3,638,381	+	cyoE	OKGIIK_16555	0.90	+0.9
3,638,382	-	cyoE	OKGIIK_16555	0.90	-1.3
3,638,382	-	cyoE	OKGIIK_16555	0.90	-1.4
3,638,609	+				+0.2
3,638,620	+				-2.0
3,638,620	+				-1.5
3,638,620	+				-0.3
3,638,620	+				-0.9
3,638,620	+				+0.2
3,638,620	+				-1.8
3,638,621	-				+0.2
3,638,621	-				-0.9
3,638,621	-				+1.6
3,638,621	-				+0.7
3,638,621	-				+1.4
3,638,621	-				+1.2
3,638,621	-				+0.7
3,638,630	+				+1.9
3,638,631	-				-1.1
3,638,631	-				-0.1
3,638,631	-				-0.5
3,638,631	-				-0.8
3,638,631	-				-0.5
3,638,635	+				-0.8
3,638,635	+				+1.0
3,638,681	-				+0.1
3,638,735	+				+1.6
3,638,776	+				+0.9
3,638,874	+		OKGIIK_16560	0.33	+0.2
3,638,874	+		OKGIIK_16560	0.33	+0.9
3,638,874	+		OKGIIK_16560	0.33	-0.3
3,638,874	+		OKGIIK_16560	0.33	-0.7
3,638,874	+		OKGIIK_16560	0.33	-1.1
3,638,874	+		OKGIIK_16560	0.33	-0.0
3,638,874	+		OKGIIK_16560	0.33	-0.3
3,638,874	+		OKGIIK_16560	0.33	+0.3
3,638,874	+		OKGIIK_16560	0.33	+1.3
3,638,874	+		OKGIIK_16560	0.33	+0.5
3,638,874	+		OKGIIK_16560	0.33	+0.3
3,638,874	+		OKGIIK_16560	0.33	+0.0
3,638,874	+		OKGIIK_16560	0.33	+1.5
3,638,875	-		OKGIIK_16560	0.34	-0.7
3,638,875	-		OKGIIK_16560	0.34	-0.4
3,638,875	-		OKGIIK_16560	0.34	+0.5
3,639,022	+				-0.4
3,639,023	-				-1.4
3,639,167	-				-0.7
3,639,167	-				-0.1
3,639,568	-	mgtA	OKGIIK_16565	0.14	-0.4
3,639,945	+	mgtA	OKGIIK_16565	0.28	-0.9
3,640,359	+	mgtA	OKGIIK_16565	0.44	-1.5
3,640,359	+	mgtA	OKGIIK_16565	0.44	+0.2
3,640,365	+	mgtA	OKGIIK_16565	0.44	-2.9
3,640,366	-	mgtA	OKGIIK_16565	0.44	-0.8
3,641,238	+	mgtA	OKGIIK_16565	0.77	-0.9
3,641,355	+	mgtA	OKGIIK_16565	0.81	+0.9
3,641,355	+	mgtA	OKGIIK_16565	0.81	-0.9
3,641,356	-	mgtA	OKGIIK_16565	0.82	-0.4
3,641,356	-	mgtA	OKGIIK_16565	0.82	-0.9
3,641,403	+	mgtA	OKGIIK_16565	0.83	+1.4
3,641,403	+	mgtA	OKGIIK_16565	0.83	-1.0
3,641,403	+	mgtA	OKGIIK_16565	0.83	+1.9
3,641,404	-	mgtA	OKGIIK_16565	0.83	-0.5
3,641,404	-	mgtA	OKGIIK_16565	0.83	-0.7
3,641,407	+	mgtA	OKGIIK_16565	0.83	+0.1
3,641,407	+	mgtA	OKGIIK_16565	0.83	+1.1
3,641,408	-	mgtA	OKGIIK_16565	0.83	-0.6
3,641,408	-	mgtA	OKGIIK_16565	0.83	+0.1
3,641,784	+				-0.4
3,641,817	+				-1.5
3,641,818	-				+1.5
3,641,818	-				+0.6
3,641,844	+				+0.4
3,641,844	+				+0.7
3,641,845	-				+0.3
3,642,284	+		OKGIIK_16570	0.37	+0.5
3,642,284	+		OKGIIK_16570	0.37	-0.1
3,642,284	+		OKGIIK_16570	0.37	-1.8
3,642,284	+		OKGIIK_16570	0.37	-0.5
3,642,284	+		OKGIIK_16570	0.37	+0.4
3,642,284	+		OKGIIK_16570	0.37	+0.3
3,642,285	-		OKGIIK_16570	0.37	+0.9
3,642,285	-		OKGIIK_16570	0.37	-0.5
3,642,285	-		OKGIIK_16570	0.37	-1.4
3,642,285	-		OKGIIK_16570	0.37	-1.1
3,642,285	-		OKGIIK_16570	0.37	-2.1
3,642,285	-		OKGIIK_16570	0.37	-0.7
3,642,316	-		OKGIIK_16570	0.40	-2.0
3,642,316	-		OKGIIK_16570	0.40	+0.1
3,642,317	+		OKGIIK_16570	0.41	+0.2
3,642,317	+		OKGIIK_16570	0.41	+2.2
3,642,317	+		OKGIIK_16570	0.41	-1.0
3,642,317	+		OKGIIK_16570	0.41	-1.5
3,642,318	-		OKGIIK_16570	0.41	-0.1
3,642,318	-		OKGIIK_16570	0.41	-1.5
3,642,318	-		OKGIIK_16570	0.41	+0.1
3,642,318	-		OKGIIK_16570	0.41	+0.3
3,642,614	+		OKGIIK_16570	0.70	+0.6
3,642,614	+		OKGIIK_16570	0.70	-0.4
3,642,614	+		OKGIIK_16570	0.70	+1.9
3,642,614	+		OKGIIK_16570	0.70	+0.3
3,642,614	+		OKGIIK_16570	0.70	+0.9
3,642,614	+		OKGIIK_16570	0.70	-1.4
3,642,614	+		OKGIIK_16570	0.70	+0.1
3,642,615	-		OKGIIK_16570	0.70	-1.2
3,642,615	-		OKGIIK_16570	0.70	+0.1