Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_15875

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
3,466,197	+		OKGIIK_15870	0.42	-1.4
3,466,197	+		OKGIIK_15870	0.42	-0.8
3,466,197	+		OKGIIK_15870	0.42	-1.7
3,466,198	-		OKGIIK_15870	0.42	-0.0
3,466,198	-		OKGIIK_15870	0.42	-0.6
3,466,258	+		OKGIIK_15870	0.47	-1.3
3,466,258	+		OKGIIK_15870	0.47	-1.6
3,466,259	-		OKGIIK_15870	0.47	-0.0
3,466,343	+		OKGIIK_15870	0.53	+0.3
3,466,343	+		OKGIIK_15870	0.53	+0.9
3,466,343	+		OKGIIK_15870	0.53	-0.9
3,466,343	+		OKGIIK_15870	0.53	+1.1
3,466,343	+		OKGIIK_15870	0.53	-3.4
3,466,343	+		OKGIIK_15870	0.53	+0.8
3,466,343	+		OKGIIK_15870	0.53	-1.6
3,466,343	+		OKGIIK_15870	0.53	+1.1
3,466,344	-		OKGIIK_15870	0.54	-0.1
3,466,344	-		OKGIIK_15870	0.54	+0.3
3,466,344	-		OKGIIK_15870	0.54	-1.8
3,466,344	-		OKGIIK_15870	0.54	-1.7
3,466,344	-		OKGIIK_15870	0.54	+0.0
3,466,344	-		OKGIIK_15870	0.54	-0.2
3,466,344	-		OKGIIK_15870	0.54	-0.0
3,466,344	-		OKGIIK_15870	0.54	-2.1
3,466,344	-		OKGIIK_15870	0.54	-0.6
3,466,344	-		OKGIIK_15870	0.54	+0.7
3,466,346	-		OKGIIK_15870	0.54	-1.9
3,466,346	-		OKGIIK_15870	0.54	+0.9
3,466,346	-		OKGIIK_15870	0.54	+0.2
3,466,351	+		OKGIIK_15870	0.54	+0.5
3,466,351	+		OKGIIK_15870	0.54	+1.9
3,466,351	+		OKGIIK_15870	0.54	-0.3
3,466,351	+		OKGIIK_15870	0.54	-0.6
3,466,351	+		OKGIIK_15870	0.54	-0.6
3,466,351	+		OKGIIK_15870	0.54	-0.9
3,466,351	+		OKGIIK_15870	0.54	+1.1
3,466,352	-		OKGIIK_15870	0.54	-1.9
3,466,352	-		OKGIIK_15870	0.54	-0.7
3,466,352	-		OKGIIK_15870	0.54	-0.0
3,466,352	-		OKGIIK_15870	0.54	-1.1
3,466,352	-		OKGIIK_15870	0.54	+0.1
3,466,352	-		OKGIIK_15870	0.54	-1.3
3,466,352	-		OKGIIK_15870	0.54	-0.3
3,466,389	+		OKGIIK_15870	0.57	-0.2
3,466,390	-		OKGIIK_15870	0.57	-0.4
3,466,463	+		OKGIIK_15870	0.63	-0.7
3,466,463	+		OKGIIK_15870	0.63	-0.6
3,466,463	+		OKGIIK_15870	0.63	-0.3
3,466,463	+		OKGIIK_15870	0.63	+0.7
3,466,464	-		OKGIIK_15870	0.63	-2.2
3,466,464	-		OKGIIK_15870	0.63	-0.1
3,466,464	-		OKGIIK_15870	0.63	-0.2
3,466,464	-		OKGIIK_15870	0.63	+0.6
3,466,464	-		OKGIIK_15870	0.63	-0.3
3,466,531	+		OKGIIK_15870	0.69	-0.1
3,466,531	+		OKGIIK_15870	0.69	+0.3
3,466,532	-		OKGIIK_15870	0.69	-0.7
3,466,532	-		OKGIIK_15870	0.69	+1.0
3,466,601	+		OKGIIK_15870	0.74	-0.2
3,466,601	+		OKGIIK_15870	0.74	-1.0
3,466,602	-		OKGIIK_15870	0.74	+0.2
3,466,602	-		OKGIIK_15870	0.74	+0.3
3,466,602	-		OKGIIK_15870	0.74	-0.3
3,466,666	-		OKGIIK_15870	0.79	+0.3
3,466,666	-		OKGIIK_15870	0.79	-1.3
3,466,679	+		OKGIIK_15870	0.80	-0.1
3,466,679	+		OKGIIK_15870	0.80	-0.9
3,466,679	+		OKGIIK_15870	0.80	-1.4
3,466,679	+		OKGIIK_15870	0.80	+0.7
3,466,680	-		OKGIIK_15870	0.81	-0.1
3,466,680	-		OKGIIK_15870	0.81	-1.7
3,466,723	+		OKGIIK_15870	0.84	-0.4
3,466,724	-		OKGIIK_15870	0.84	+0.4
3,466,724	-		OKGIIK_15870	0.84	+1.9
3,466,724	-		OKGIIK_15870	0.84	-1.0
3,466,805	+				-0.3
3,466,805	+				-0.4
3,466,805	+				-2.1
3,466,805	+				-0.9
3,466,805	+				+0.6
3,466,805	+				-1.8
3,466,805	+				+0.2
3,466,805	+				-0.4
3,466,805	+				+1.6
3,466,805	+				+0.4
3,466,805	+				+0.9
3,466,805	+				-1.6
3,466,805	+				-1.1
3,466,806	-				+0.4
3,466,806	-				-0.7
3,466,806	-				-0.3
3,466,806	-				-0.3
3,466,806	-				-1.7
3,466,806	-				+0.3
3,466,806	-				-0.3
3,466,806	-				-0.6
3,466,806	-				-2.1
3,466,806	-				+1.6
3,466,806	-				+0.7
3,466,806	-				-0.1
3,466,806	-				+1.3
3,466,806	-				+0.3
3,466,806	-				-0.4
3,466,806	-				-0.8
3,466,806	-				+0.4
3,466,806	-				-2.5
3,466,806	-				+0.3
3,466,806	-				-0.1
3,466,807	+				-0.5
3,466,807	+				+1.6
3,466,807	+				+0.0
3,466,808	-				+1.6
3,466,808	-				+0.6
3,466,862	+				-0.3
3,466,863	-				-0.5
3,466,863	-				-0.1
3,466,863	-				-1.5
3,467,028	-				+0.7
3,467,028	-				-1.5
3,467,028	-				+0.4
3,467,308	+				+0.6
3,467,377	+				+2.1
3,467,378	+				+0.7
3,467,378	+				+1.3
3,467,378	+				+1.2
3,467,378	+				+1.1
3,467,378	+				+0.7
3,467,379	-				+0.4
3,467,379	-				+0.1
3,467,379	-				+0.2
3,467,379	-				-1.8
3,467,379	-				-1.8
3,467,379	-				-0.5
3,467,381	+				-1.3
3,467,382	-				+0.9
3,467,665	+				-1.6
3,467,665	+				-1.6
3,467,666	-				-0.7
3,467,666	-				-2.0
3,467,666	-				-1.6
3,467,666	-				+0.6
3,467,666	-				-2.2
3,467,670	+				-0.4
3,467,671	-				-0.4
3,467,671	-				-1.8
3,467,671	-				+1.2
3,467,710	+				+0.1
3,467,710	+				-0.3
3,467,710	+				-0.1
3,467,710	+				-1.4
3,467,710	+				+0.6
3,467,710	+				+0.4
3,467,711	-				+1.9
3,467,711	-				-1.7
3,467,711	-				+1.2
3,467,711	-				-0.3
3,467,711	-				+1.9
3,467,711	-				-0.4
3,467,711	-				-0.2
3,467,711	-				+0.1
3,467,711	-				-0.1
3,467,760	-				-0.6
3,467,768	+				-1.3
3,467,768	+				-1.9
3,467,900	-				-0.7
3,468,149	+		OKGIIK_15880	0.41	+1.1
3,468,192	+		OKGIIK_15880	0.54	+1.1
3,468,193	-		OKGIIK_15880	0.54	-0.1
3,468,193	-		OKGIIK_15880	0.54	+0.1
3,468,193	-		OKGIIK_15880	0.54	+0.1
3,468,193	-		OKGIIK_15880	0.54	-1.7
3,468,193	-		OKGIIK_15880	0.54	+0.2
3,468,193	-		OKGIIK_15880	0.54	-0.8
3,468,245	+		OKGIIK_15880	0.70	-2.0
3,468,246	-		OKGIIK_15880	0.71	-0.9
3,468,246	-		OKGIIK_15880	0.71	+0.8
3,468,246	-		OKGIIK_15880	0.71	-0.4
3,468,246	-		OKGIIK_15880	0.71	+0.1