Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_15135

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
3,289,619	+		OKGIIK_15130	0.27	-0.1
3,289,619	+		OKGIIK_15130	0.27	-1.5
3,289,619	+		OKGIIK_15130	0.27	-0.1
3,289,619	+		OKGIIK_15130	0.27	-1.1
3,289,619	+		OKGIIK_15130	0.27	+0.8
3,289,620	-		OKGIIK_15130	0.27	-0.4
3,289,620	-		OKGIIK_15130	0.27	+0.9
3,289,620	-		OKGIIK_15130	0.27	+2.5
3,289,620	-		OKGIIK_15130	0.27	-2.1
3,289,620	-		OKGIIK_15130	0.27	-0.7
3,289,739	+		OKGIIK_15130	0.40	-0.6
3,289,739	+		OKGIIK_15130	0.40	-0.0
3,289,739	+		OKGIIK_15130	0.40	+0.5
3,289,739	+		OKGIIK_15130	0.40	+0.0
3,289,739	+		OKGIIK_15130	0.40	-0.3
3,289,740	-		OKGIIK_15130	0.40	+2.1
3,289,740	-		OKGIIK_15130	0.40	-0.4
3,289,740	-		OKGIIK_15130	0.40	+0.1
3,289,740	-		OKGIIK_15130	0.40	-0.7
3,289,922	+		OKGIIK_15130	0.60	+0.7
3,289,922	+		OKGIIK_15130	0.60	+0.2
3,289,922	+		OKGIIK_15130	0.60	-1.0
3,289,922	+		OKGIIK_15130	0.60	-0.1
3,289,922	+		OKGIIK_15130	0.60	+0.3
3,289,923	-		OKGIIK_15130	0.61	+0.2
3,289,923	-		OKGIIK_15130	0.61	+0.2
3,289,923	-		OKGIIK_15130	0.61	+0.8
3,290,332	+				-1.6
3,290,333	-				-0.7
3,290,333	-				+0.7
3,290,381	+				-1.1
3,290,381	+				-1.8
3,290,381	+				+0.3
3,290,381	+				+1.1
3,290,382	-				-0.6
3,290,396	+				-1.1
3,290,744	+		OKGIIK_15135	0.18	-0.4
3,290,744	+		OKGIIK_15135	0.18	-0.4
3,290,744	+		OKGIIK_15135	0.18	-0.4
3,290,744	+		OKGIIK_15135	0.18	+1.3
3,290,745	-		OKGIIK_15135	0.18	-2.1
3,290,745	-		OKGIIK_15135	0.18	-0.7
3,290,801	+		OKGIIK_15135	0.21	-0.3
3,290,801	+		OKGIIK_15135	0.21	+0.8
3,290,801	+		OKGIIK_15135	0.21	-0.9
3,290,801	+		OKGIIK_15135	0.21	+2.1
3,290,801	+		OKGIIK_15135	0.21	-0.3
3,290,801	+		OKGIIK_15135	0.21	+0.6
3,290,801	+		OKGIIK_15135	0.21	+1.0
3,290,802	-		OKGIIK_15135	0.21	+0.6
3,290,852	+		OKGIIK_15135	0.24	-0.3
3,290,852	+		OKGIIK_15135	0.24	+0.3
3,290,852	+		OKGIIK_15135	0.24	-1.3
3,290,852	+		OKGIIK_15135	0.24	+0.5
3,290,852	+		OKGIIK_15135	0.24	-0.2
3,290,852	+		OKGIIK_15135	0.24	-0.5
3,290,852	+		OKGIIK_15135	0.24	-1.0
3,290,852	+		OKGIIK_15135	0.24	+1.6
3,290,853	-		OKGIIK_15135	0.24	-0.1
3,290,853	-		OKGIIK_15135	0.24	+1.1
3,290,853	-		OKGIIK_15135	0.24	-0.4
3,290,853	-		OKGIIK_15135	0.24	-0.8
3,290,853	-		OKGIIK_15135	0.24	+0.1
3,291,002	+		OKGIIK_15135	0.31	-0.9
3,291,002	+		OKGIIK_15135	0.31	-0.7
3,291,003	-		OKGIIK_15135	0.31	+0.0
3,291,003	-		OKGIIK_15135	0.31	-0.1
3,291,003	-		OKGIIK_15135	0.31	-0.5
3,291,003	-		OKGIIK_15135	0.31	-0.4
3,291,003	-		OKGIIK_15135	0.31	-0.1
3,291,003	-		OKGIIK_15135	0.31	+1.9
3,291,003	-		OKGIIK_15135	0.31	+0.7
3,291,003	-		OKGIIK_15135	0.31	-0.9
3,291,003	-		OKGIIK_15135	0.31	+0.3
3,291,003	-		OKGIIK_15135	0.31	+0.2
3,291,009	-		OKGIIK_15135	0.31	-1.7
3,291,047	+		OKGIIK_15135	0.33	+0.6
3,291,048	-		OKGIIK_15135	0.33	-0.1
3,291,048	-		OKGIIK_15135	0.33	+0.3
3,291,098	+		OKGIIK_15135	0.36	-0.1
3,291,098	+		OKGIIK_15135	0.36	+0.1
3,291,098	+		OKGIIK_15135	0.36	+1.5
3,291,099	-		OKGIIK_15135	0.36	-0.6
3,291,099	-		OKGIIK_15135	0.36	-0.2
3,291,099	-		OKGIIK_15135	0.36	-0.7
3,291,099	-		OKGIIK_15135	0.36	-1.4
3,291,275	+		OKGIIK_15135	0.44	-1.4
3,291,275	+		OKGIIK_15135	0.44	+1.9
3,291,275	+		OKGIIK_15135	0.44	-0.7
3,291,275	+		OKGIIK_15135	0.44	+1.1
3,291,275	+		OKGIIK_15135	0.44	-0.7
3,291,275	+		OKGIIK_15135	0.44	-0.2
3,291,275	+		OKGIIK_15135	0.44	-0.4
3,291,275	+		OKGIIK_15135	0.44	+0.5
3,291,275	+		OKGIIK_15135	0.44	+0.9
3,291,275	+		OKGIIK_15135	0.44	+0.2
3,291,275	+		OKGIIK_15135	0.44	-1.1
3,291,275	+		OKGIIK_15135	0.44	-0.4
3,291,275	+		OKGIIK_15135	0.44	+0.4
3,291,275	+		OKGIIK_15135	0.44	-1.7
3,291,275	+		OKGIIK_15135	0.44	-0.4
3,291,276	-		OKGIIK_15135	0.44	-0.1
3,291,276	-		OKGIIK_15135	0.44	-0.6
3,291,276	-		OKGIIK_15135	0.44	-0.2
3,291,276	-		OKGIIK_15135	0.44	+0.1
3,291,276	-		OKGIIK_15135	0.44	-0.1
3,291,276	-		OKGIIK_15135	0.44	-2.0
3,291,413	+		OKGIIK_15135	0.51	+0.2
3,291,413	+		OKGIIK_15135	0.51	+0.9
3,291,414	-		OKGIIK_15135	0.51	-0.1
3,291,414	-		OKGIIK_15135	0.51	+0.3
3,291,549	-		OKGIIK_15135	0.57	-0.1
3,291,549	-		OKGIIK_15135	0.57	-0.8
3,291,714	-		OKGIIK_15135	0.66	+1.0
3,291,714	-		OKGIIK_15135	0.66	-0.1
3,291,714	-		OKGIIK_15135	0.66	-0.9
3,291,830	+		OKGIIK_15135	0.71	-0.8
3,291,831	-		OKGIIK_15135	0.71	-0.4
3,291,960	-		OKGIIK_15135	0.77	+0.1
3,292,004	+		OKGIIK_15135	0.80	-0.6
3,292,004	+		OKGIIK_15135	0.80	-0.2
3,292,004	+		OKGIIK_15135	0.80	+0.4
3,292,005	-		OKGIIK_15135	0.80	-0.7
3,292,005	-		OKGIIK_15135	0.80	-3.0
3,292,005	-		OKGIIK_15135	0.80	-1.1
3,292,094	+		OKGIIK_15135	0.84	-0.1
3,292,094	+		OKGIIK_15135	0.84	+0.5
3,292,094	+		OKGIIK_15135	0.84	+0.4
3,292,094	+		OKGIIK_15135	0.84	-0.1
3,292,094	+		OKGIIK_15135	0.84	-0.8
3,292,094	+		OKGIIK_15135	0.84	-1.6
3,292,094	+		OKGIIK_15135	0.84	-0.0
3,292,094	+		OKGIIK_15135	0.84	-0.4
3,292,095	-		OKGIIK_15135	0.84	-0.0
3,292,095	-		OKGIIK_15135	0.84	+0.6
3,292,095	-		OKGIIK_15135	0.84	+1.9
3,292,095	-		OKGIIK_15135	0.84	-0.7
3,292,095	-		OKGIIK_15135	0.84	-0.9
3,292,095	-		OKGIIK_15135	0.84	+1.2
3,292,095	-		OKGIIK_15135	0.84	+0.9
3,292,095	-		OKGIIK_15135	0.84	-0.6
3,292,095	-		OKGIIK_15135	0.84	-0.1
3,292,095	-		OKGIIK_15135	0.84	-0.7
3,292,097	+		OKGIIK_15135	0.84	-0.8
3,292,152	-		OKGIIK_15135	0.87	+0.5
3,292,152	-		OKGIIK_15135	0.87	-0.1
3,292,169	+		OKGIIK_15135	0.88	+0.6
3,292,170	-		OKGIIK_15135	0.88	+0.3
3,292,170	-		OKGIIK_15135	0.88	+0.3
3,292,170	-		OKGIIK_15135	0.88	-0.2
3,292,323	-				-0.9
3,292,403	+				-0.6
3,292,403	+				-0.6
3,292,404	-				+0.3
3,292,417	+				-1.1
3,292,417	+				-0.7
3,292,417	+				-0.4
3,292,417	+				-0.7
3,292,418	-				+0.2
3,292,418	-				+1.2
3,292,418	-				+0.5
3,292,421	+				-0.7
3,292,421	+				+0.6
3,292,422	-				+0.7
3,292,569	+				+0.6
3,292,569	+				-0.2
3,292,569	+				+1.4
3,292,569	+				-0.0
3,292,569	+				+0.9
3,292,569	+				-0.7
3,292,569	+				+0.9
3,292,569	+				-1.7
3,292,569	+				-0.8
3,292,569	+				-0.4
3,292,569	+				+0.2
3,292,570	-				+0.9
3,292,570	-				-1.3
3,292,570	-				-2.6
3,292,570	-				-1.1
3,292,570	-				-0.2
3,292,591	+	yhcF	OKGIIK_15140	0.11	+0.5
3,292,591	+	yhcF	OKGIIK_15140	0.11	-1.5
3,292,591	+	yhcF	OKGIIK_15140	0.11	+0.3
3,292,591	+	yhcF	OKGIIK_15140	0.11	-0.2
3,292,591	+	yhcF	OKGIIK_15140	0.11	+0.6
3,292,592	-	yhcF	OKGIIK_15140	0.12	-0.7
3,292,592	-	yhcF	OKGIIK_15140	0.12	+1.6
3,292,592	-	yhcF	OKGIIK_15140	0.12	+1.0
3,292,592	-	yhcF	OKGIIK_15140	0.12	+0.7
3,292,592	-	yhcF	OKGIIK_15140	0.12	-1.7
3,292,595	+	yhcF	OKGIIK_15140	0.12	+1.0
3,292,596	-	yhcF	OKGIIK_15140	0.13	+0.5
3,292,644	+	yhcF	OKGIIK_15140	0.25	+0.2
3,292,644	+	yhcF	OKGIIK_15140	0.25	-0.9
3,292,644	+	yhcF	OKGIIK_15140	0.25	-1.7
3,292,645	-	yhcF	OKGIIK_15140	0.26	+0.4
3,292,645	-	yhcF	OKGIIK_15140	0.26	+0.0
3,292,671	+	yhcF	OKGIIK_15140	0.32	+0.5
3,292,725	-	yhcF	OKGIIK_15140	0.46	-1.9
3,292,725	-	yhcF	OKGIIK_15140	0.46	-1.3
3,293,001	+				+0.6
3,293,002	-				+0.2
3,293,002	-				+0.5
3,293,202	+	ccmA	OKGIIK_15145	0.30	-0.7
3,293,202	+	ccmA	OKGIIK_15145	0.30	-1.4
3,293,202	+	ccmA	OKGIIK_15145	0.30	-1.8
3,293,202	+	ccmA	OKGIIK_15145	0.30	+1.2
3,293,203	-	ccmA	OKGIIK_15145	0.30	-0.2
3,293,203	-	ccmA	OKGIIK_15145	0.30	+1.4
3,293,203	-	ccmA	OKGIIK_15145	0.30	+0.6
3,293,203	-	ccmA	OKGIIK_15145	0.30	-1.6
3,293,275	-	ccmA	OKGIIK_15145	0.38	+0.1