Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_14775

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
3,219,706	+		OKGIIK_14765	0.57	+0.0
3,219,706	+		OKGIIK_14765	0.57	+0.8
3,219,706	+		OKGIIK_14765	0.57	-0.6
3,219,706	+		OKGIIK_14765	0.57	+0.9
3,219,706	+		OKGIIK_14765	0.57	-1.2
3,219,706	+		OKGIIK_14765	0.57	-1.4
3,219,706	+		OKGIIK_14765	0.57	-0.1
3,219,706	+		OKGIIK_14765	0.57	+0.4
3,219,707	-		OKGIIK_14765	0.57	-2.0
3,219,707	-		OKGIIK_14765	0.57	-0.4
3,219,707	-		OKGIIK_14765	0.57	+0.7
3,219,707	-		OKGIIK_14765	0.57	-0.9
3,219,707	-		OKGIIK_14765	0.57	-0.1
3,219,707	-		OKGIIK_14765	0.57	-0.4
3,219,707	-		OKGIIK_14765	0.57	+0.5
3,219,707	-		OKGIIK_14765	0.57	-0.9
3,219,707	-		OKGIIK_14765	0.57	-1.1
3,219,707	-		OKGIIK_14765	0.57	+0.9
3,219,707	-		OKGIIK_14765	0.57	-0.3
3,219,707	-		OKGIIK_14765	0.57	-0.9
3,219,746	-		OKGIIK_14765	0.63	+0.5
3,219,818	-		OKGIIK_14765	0.74	+0.7
3,219,838	+		OKGIIK_14765	0.77	-0.1
3,219,838	+		OKGIIK_14765	0.77	+0.9
3,219,838	+		OKGIIK_14765	0.77	-1.6
3,219,839	-		OKGIIK_14765	0.77	+0.5
3,219,880	+		OKGIIK_14765	0.83	-1.5
3,219,881	-		OKGIIK_14765	0.83	+0.3
3,219,881	-		OKGIIK_14765	0.83	+0.1
3,219,881	-		OKGIIK_14765	0.83	+0.6
3,219,934	+				+0.5
3,219,935	-				-0.1
3,219,935	-				+0.1
3,219,978	+				-1.9
3,219,978	+				-0.4
3,219,978	+				+0.3
3,219,978	+				-0.8
3,219,979	-				-0.6
3,219,979	-				-0.7
3,220,011	+				-0.4
3,220,012	-				-0.1
3,220,047	+		OKGIIK_14770	0.16	-1.9
3,220,047	+		OKGIIK_14770	0.16	+2.2
3,220,048	-		OKGIIK_14770	0.16	-0.7
3,220,059	+		OKGIIK_14770	0.19	+0.1
3,220,059	+		OKGIIK_14770	0.19	+0.3
3,220,059	+		OKGIIK_14770	0.19	-0.9
3,220,059	+		OKGIIK_14770	0.19	-0.7
3,220,060	-		OKGIIK_14770	0.19	-1.0
3,220,060	-		OKGIIK_14770	0.19	-0.1
3,220,060	-		OKGIIK_14770	0.19	+1.9
3,220,060	-		OKGIIK_14770	0.19	+0.2
3,220,060	-		OKGIIK_14770	0.19	-1.4
3,220,060	-		OKGIIK_14770	0.19	+1.1
3,220,060	-		OKGIIK_14770	0.19	-0.1
3,220,060	-		OKGIIK_14770	0.19	+0.3
3,220,074	+		OKGIIK_14770	0.22	+0.3
3,220,074	+		OKGIIK_14770	0.22	-1.6
3,220,074	+		OKGIIK_14770	0.22	+0.6
3,220,075	-		OKGIIK_14770	0.22	-0.4
3,220,075	-		OKGIIK_14770	0.22	+2.4
3,220,075	-		OKGIIK_14770	0.22	-1.8
3,220,075	-		OKGIIK_14770	0.22	-0.2
3,220,075	-		OKGIIK_14770	0.22	+0.3
3,220,075	-		OKGIIK_14770	0.22	+0.4
3,220,075	-		OKGIIK_14770	0.22	+0.4
3,220,122	+		OKGIIK_14770	0.33	-0.6
3,220,122	+		OKGIIK_14770	0.33	+1.0
3,220,122	+		OKGIIK_14770	0.33	+0.2
3,220,122	+		OKGIIK_14770	0.33	-1.3
3,220,122	+		OKGIIK_14770	0.33	-1.1
3,220,122	+		OKGIIK_14770	0.33	-0.6
3,220,123	-		OKGIIK_14770	0.33	-0.1
3,220,123	-		OKGIIK_14770	0.33	-1.1
3,220,162	-		OKGIIK_14770	0.42	-0.1
3,220,162	-		OKGIIK_14770	0.42	+0.2
3,220,162	-		OKGIIK_14770	0.42	-0.4
3,220,308	+		OKGIIK_14770	0.76	+1.1
3,220,308	+		OKGIIK_14770	0.76	-0.7
3,220,308	+		OKGIIK_14770	0.76	-2.1
3,220,308	+		OKGIIK_14770	0.76	-0.6
3,220,308	+		OKGIIK_14770	0.76	-0.8
3,220,308	+		OKGIIK_14770	0.76	-2.0
3,220,308	+		OKGIIK_14770	0.76	-1.0
3,220,308	+		OKGIIK_14770	0.76	+0.3
3,220,308	+		OKGIIK_14770	0.76	+0.3
3,220,308	+		OKGIIK_14770	0.76	+0.0
3,220,308	+		OKGIIK_14770	0.76	+0.8
3,220,309	-		OKGIIK_14770	0.76	+1.0
3,220,309	-		OKGIIK_14770	0.76	+0.9
3,220,309	-		OKGIIK_14770	0.76	-0.2
3,220,309	-		OKGIIK_14770	0.76	-0.7
3,220,309	-		OKGIIK_14770	0.76	-0.4
3,220,309	-		OKGIIK_14770	0.76	+0.1
3,220,309	-		OKGIIK_14770	0.76	+1.0
3,220,309	-		OKGIIK_14770	0.76	-0.3
3,220,309	-		OKGIIK_14770	0.76	+0.8
3,220,311	+		OKGIIK_14770	0.76	+1.2
3,220,311	+		OKGIIK_14770	0.76	-0.9
3,220,311	+		OKGIIK_14770	0.76	-2.0
3,220,311	+		OKGIIK_14770	0.76	+0.8
3,220,311	+		OKGIIK_14770	0.76	-1.7
3,220,311	+		OKGIIK_14770	0.76	-0.7
3,220,311	+		OKGIIK_14770	0.76	+0.5
3,220,311	+		OKGIIK_14770	0.76	+1.3
3,220,312	-		OKGIIK_14770	0.76	-0.7
3,220,312	-		OKGIIK_14770	0.76	-0.6
3,220,312	-		OKGIIK_14770	0.76	-2.9
3,220,312	-		OKGIIK_14770	0.76	-0.8
3,220,312	-		OKGIIK_14770	0.76	-1.3
3,220,312	-		OKGIIK_14770	0.76	-1.3
3,220,312	-		OKGIIK_14770	0.76	-0.3
3,220,312	-		OKGIIK_14770	0.76	-0.4
3,220,312	-		OKGIIK_14770	0.76	-0.7
3,220,312	-		OKGIIK_14770	0.76	-0.4
3,220,561	+				-0.8
3,220,562	-				+0.3
3,220,562	-				-0.3
3,220,562	-				-0.8
3,220,562	-				-1.1
3,220,562	-				-0.1
3,220,662	-				-0.1
3,220,662	-				-0.2
3,220,662	-				-1.4
3,220,968	-		OKGIIK_14775	0.31	-0.3
3,221,128	+		OKGIIK_14775	0.49	-0.4
3,221,128	+		OKGIIK_14775	0.49	+1.9
3,221,128	+		OKGIIK_14775	0.49	+0.8
3,221,129	-		OKGIIK_14775	0.49	-1.2
3,221,129	-		OKGIIK_14775	0.49	-0.1
3,221,129	-		OKGIIK_14775	0.49	-0.4
3,221,129	-		OKGIIK_14775	0.49	-2.9
3,221,129	-		OKGIIK_14775	0.49	-0.1
3,221,129	-		OKGIIK_14775	0.49	+0.3
3,221,129	-		OKGIIK_14775	0.49	-1.1
3,221,129	-		OKGIIK_14775	0.49	+0.2
3,221,131	+		OKGIIK_14775	0.49	-0.4
3,221,131	+		OKGIIK_14775	0.49	-0.8
3,221,131	+		OKGIIK_14775	0.49	-0.3
3,221,132	-		OKGIIK_14775	0.49	+0.9
3,221,132	-		OKGIIK_14775	0.49	+0.3
3,221,132	-		OKGIIK_14775	0.49	-0.4
3,221,132	-		OKGIIK_14775	0.49	+0.1
3,221,132	-		OKGIIK_14775	0.49	-1.1
3,221,132	-		OKGIIK_14775	0.49	+0.0
3,221,137	+		OKGIIK_14775	0.50	-0.2
3,221,138	-		OKGIIK_14775	0.50	-1.1
3,221,138	-		OKGIIK_14775	0.50	-1.6
3,221,138	-		OKGIIK_14775	0.50	-0.7
3,221,197	+		OKGIIK_14775	0.57	-0.0
3,221,197	+		OKGIIK_14775	0.57	-0.9
3,221,198	-		OKGIIK_14775	0.57	+0.2
3,221,198	-		OKGIIK_14775	0.57	-0.4
3,221,198	-		OKGIIK_14775	0.57	+0.7
3,221,309	+		OKGIIK_14775	0.69	+1.0
3,221,359	+		OKGIIK_14775	0.75	-0.5
3,221,359	+		OKGIIK_14775	0.75	+1.3
3,221,359	+		OKGIIK_14775	0.75	-0.4
3,221,359	+		OKGIIK_14775	0.75	+0.5
3,221,360	-		OKGIIK_14775	0.75	-0.0
3,221,368	+		OKGIIK_14775	0.76	-0.9
3,221,368	+		OKGIIK_14775	0.76	-1.1
3,221,375	-		OKGIIK_14775	0.76	-2.0
3,221,398	+		OKGIIK_14775	0.79	-2.1
3,221,398	+		OKGIIK_14775	0.79	+0.8
3,221,398	+		OKGIIK_14775	0.79	-0.2
3,221,398	+		OKGIIK_14775	0.79	+0.7
3,221,398	+		OKGIIK_14775	0.79	-0.6
3,221,398	+		OKGIIK_14775	0.79	-0.7
3,221,398	+		OKGIIK_14775	0.79	+0.1
3,221,398	+		OKGIIK_14775	0.79	-1.0
3,221,398	+		OKGIIK_14775	0.79	-0.1
3,221,399	-		OKGIIK_14775	0.79	+0.3
3,221,399	-		OKGIIK_14775	0.79	+0.3
3,221,416	+		OKGIIK_14775	0.81	+0.7
3,221,416	+		OKGIIK_14775	0.81	-0.5
3,221,416	+		OKGIIK_14775	0.81	+0.3
3,221,416	+		OKGIIK_14775	0.81	-0.4
3,221,416	+		OKGIIK_14775	0.81	+0.6
3,221,416	+		OKGIIK_14775	0.81	-1.3
3,221,417	-		OKGIIK_14775	0.81	+1.6
3,221,446	+		OKGIIK_14775	0.84	+0.8
3,221,447	-		OKGIIK_14775	0.84	-0.1
3,221,447	-		OKGIIK_14775	0.84	+0.1
3,221,447	-		OKGIIK_14775	0.84	+1.7
3,221,447	-		OKGIIK_14775	0.84	+0.0
3,221,447	-		OKGIIK_14775	0.84	+0.1
3,221,617	+				-0.9
3,221,617	+				+0.5
3,221,617	+				+0.2
3,221,618	-				-0.2
3,221,618	-				+0.9
3,221,618	-				-0.7
3,221,618	-				-0.4
3,221,618	-				-0.1
3,221,621	+				-1.6
3,221,621	+				-0.3
3,221,621	+				-1.7
3,221,621	+				+1.3
3,221,621	+				-1.0
3,221,621	+				+0.6
3,221,621	+				-2.0
3,221,621	+				-0.4
3,221,621	+				+1.1
3,221,621	+				+0.3
3,221,621	+				-0.1
3,221,621	+				+0.6
3,221,621	+				+0.4
3,221,622	-				-0.1
3,221,622	-				+0.9
3,221,622	-				-0.9
3,221,622	-				-0.4
3,221,622	-				-0.7
3,221,622	-				-1.1
3,221,622	-				-0.5
3,221,622	-				-0.6
3,221,622	-				-0.7
3,221,622	-				+0.0
3,221,622	-				-0.1
3,221,622	-				-1.1
3,221,622	-				+0.2
3,221,622	-				+0.1
3,221,622	-				-1.8
3,221,622	-				-0.9
3,221,622	-				+1.5
3,221,648	+				-1.5
3,221,648	+				-0.6
3,221,648	+				-0.8
3,221,648	+				+0.1
3,221,648	+				-1.1
3,221,648	+				+0.7
3,221,648	+				-1.0
3,221,648	+				-0.5
3,221,648	+				+0.6
3,221,648	+				+0.3
3,221,648	+				-2.0
3,221,649	-				-0.1
3,221,649	-				-1.3
3,221,649	-				+0.3
3,221,649	-				-0.3
3,221,649	-				-0.2
3,221,649	-				+0.7
3,221,649	-				-0.4
3,221,753	+		OKGIIK_14780	0.15	+1.2
3,221,753	+		OKGIIK_14780	0.15	-0.2
3,221,754	-		OKGIIK_14780	0.16	-1.6
3,221,754	-		OKGIIK_14780	0.16	+0.5
3,221,754	-		OKGIIK_14780	0.16	-0.7
3,221,754	-		OKGIIK_14780	0.16	+1.1
3,221,762	+		OKGIIK_14780	0.17	+0.9
3,221,762	+		OKGIIK_14780	0.17	-0.3
3,221,762	+		OKGIIK_14780	0.17	-0.9
3,221,762	+		OKGIIK_14780	0.17	-0.1
3,221,762	+		OKGIIK_14780	0.17	-0.1
3,221,763	-		OKGIIK_14780	0.17	-1.1
3,221,763	-		OKGIIK_14780	0.17	-1.7
3,221,763	-		OKGIIK_14780	0.17	-2.0
3,221,763	-		OKGIIK_14780	0.17	+1.4
3,221,763	-		OKGIIK_14780	0.17	-0.9
3,221,763	-		OKGIIK_14780	0.17	+2.1
3,221,763	-		OKGIIK_14780	0.17	-0.4
3,221,763	-		OKGIIK_14780	0.17	+0.6
3,221,916	-		OKGIIK_14780	0.43	+0.3
3,222,092	+		OKGIIK_14780	0.73	-1.1
3,222,092	+		OKGIIK_14780	0.73	+0.2
3,222,092	+		OKGIIK_14780	0.73	+0.8
3,222,093	-		OKGIIK_14780	0.74	+0.4
3,222,093	-		OKGIIK_14780	0.74	-0.7
3,222,107	-		OKGIIK_14780	0.76	+1.4
3,222,148	+		OKGIIK_14780	0.83	+2.3
3,222,149	-		OKGIIK_14780	0.83	-0.0