Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_14340

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
3,130,884	+		OKGIIK_14335	0.66	-0.7
3,130,884	+		OKGIIK_14335	0.66	-1.6
3,130,899	+		OKGIIK_14335	0.66	+0.3
3,130,899	+		OKGIIK_14335	0.66	-1.3
3,130,911	+		OKGIIK_14335	0.67	-0.2
3,130,911	+		OKGIIK_14335	0.67	-0.6
3,130,911	+		OKGIIK_14335	0.67	-0.9
3,130,911	+		OKGIIK_14335	0.67	-0.4
3,131,013	+		OKGIIK_14335	0.71	-1.0
3,131,013	+		OKGIIK_14335	0.71	-0.7
3,131,013	+		OKGIIK_14335	0.71	+1.0
3,131,014	-		OKGIIK_14335	0.71	-0.1
3,131,014	-		OKGIIK_14335	0.71	+0.2
3,131,014	-		OKGIIK_14335	0.71	+0.1
3,131,014	-		OKGIIK_14335	0.71	+0.4
3,131,014	-		OKGIIK_14335	0.71	+0.5
3,131,014	-		OKGIIK_14335	0.71	-1.1
3,131,014	-		OKGIIK_14335	0.71	+0.2
3,131,055	+		OKGIIK_14335	0.73	+0.9
3,131,055	+		OKGIIK_14335	0.73	+0.4
3,131,055	+		OKGIIK_14335	0.73	+1.2
3,131,055	+		OKGIIK_14335	0.73	+0.6
3,131,100	+		OKGIIK_14335	0.75	-1.9
3,131,100	+		OKGIIK_14335	0.75	-0.2
3,131,100	+		OKGIIK_14335	0.75	-0.7
3,131,101	-		OKGIIK_14335	0.75	+0.7
3,131,101	-		OKGIIK_14335	0.75	-0.1
3,131,101	-		OKGIIK_14335	0.75	+1.5
3,131,101	-		OKGIIK_14335	0.75	-0.2
3,131,101	-		OKGIIK_14335	0.75	-0.6
3,131,101	-		OKGIIK_14335	0.75	-0.4
3,131,101	-		OKGIIK_14335	0.75	-0.6
3,131,101	-		OKGIIK_14335	0.75	+0.6
3,131,101	-		OKGIIK_14335	0.75	+1.3
3,131,101	-		OKGIIK_14335	0.75	+0.2
3,131,265	+		OKGIIK_14335	0.82	+0.6
3,131,266	-		OKGIIK_14335	0.82	-0.6
3,131,266	-		OKGIIK_14335	0.82	-1.1
3,131,341	-		OKGIIK_14335	0.85	-0.2
3,131,341	-		OKGIIK_14335	0.85	-0.3
3,131,341	-		OKGIIK_14335	0.85	-1.4
3,131,341	-		OKGIIK_14335	0.85	-1.5
3,131,341	-		OKGIIK_14335	0.85	+0.9
3,131,343	+		OKGIIK_14335	0.85	-0.1
3,131,344	-		OKGIIK_14335	0.85	-0.4
3,131,344	-		OKGIIK_14335	0.85	-1.7
3,131,376	+		OKGIIK_14335	0.87	-0.4
3,131,376	+		OKGIIK_14335	0.87	-0.7
3,131,377	-		OKGIIK_14335	0.87	+0.5
3,131,377	-		OKGIIK_14335	0.87	+0.4
3,131,400	+		OKGIIK_14335	0.88	-0.7
3,131,400	+		OKGIIK_14335	0.88	-1.4
3,131,400	+		OKGIIK_14335	0.88	-0.4
3,131,400	+		OKGIIK_14335	0.88	-1.9
3,131,400	+		OKGIIK_14335	0.88	-1.4
3,131,400	+		OKGIIK_14335	0.88	+0.6
3,131,400	+		OKGIIK_14335	0.88	-0.1
3,131,400	+		OKGIIK_14335	0.88	-0.7
3,131,401	-		OKGIIK_14335	0.88	-0.4
3,131,401	-		OKGIIK_14335	0.88	+0.6
3,131,401	-		OKGIIK_14335	0.88	-0.1
3,131,401	-		OKGIIK_14335	0.88	-0.8
3,131,401	-		OKGIIK_14335	0.88	+0.8
3,131,401	-		OKGIIK_14335	0.88	+0.1
3,131,401	-		OKGIIK_14335	0.88	+0.2
3,131,401	-		OKGIIK_14335	0.88	-1.3
3,131,401	-		OKGIIK_14335	0.88	-0.8
3,131,401	-		OKGIIK_14335	0.88	-0.6
3,131,484	+				+0.2
3,131,485	-				-1.4
3,131,485	-				-0.9
3,131,485	-				-0.9
3,131,552	+				+0.2
3,131,552	+				-0.2
3,131,552	+				+0.6
3,131,552	+				-0.9
3,131,552	+				+1.9
3,131,552	+				+0.3
3,131,552	+				-0.7
3,131,552	+				-2.2
3,131,552	+				-1.8
3,131,552	+				-0.4
3,131,553	-				+0.3
3,131,553	-				-0.7
3,131,553	-				+0.2
3,131,553	-				+0.0
3,131,553	-				-1.6
3,131,553	-				+0.5
3,131,553	-				+0.8
3,131,553	-				-0.1
3,131,553	-				-0.1
3,131,610	+				+0.2
3,131,610	+				+0.2
3,131,610	+				-0.4
3,131,610	+				+1.1
3,131,610	+				+0.3
3,131,610	+				-1.4
3,131,610	+				+0.6
3,131,610	+				+0.9
3,131,610	+				+0.5
3,131,610	+				-0.6
3,131,610	+				+0.2
3,131,610	+				-0.2
3,131,611	-				+0.0
3,131,611	-				-0.5
3,131,611	-				-1.7
3,131,611	-				+0.3
3,131,611	-				+0.9
3,131,611	-				+0.6
3,131,611	-				+0.9
3,131,611	-				+1.6
3,131,611	-				+0.6
3,131,611	-				-1.2
3,131,625	+				+0.5
3,131,625	+				+1.9
3,131,626	-				+0.7
3,131,626	-				+1.4
3,131,626	-				+0.8
3,131,626	-				-1.3
3,131,626	-				+0.9
3,131,626	-				-0.3
3,131,626	-				-2.0
3,131,680	-				-0.9
3,131,680	-				+0.9
3,131,680	-				+0.3
3,131,680	-				-0.1
3,131,680	-				-1.1
3,131,680	-				+0.2
3,131,680	-				+0.6
3,131,680	-				+1.2
3,131,680	-				-0.7
3,131,680	-				-0.1
3,131,686	-				-0.7
3,131,686	-				-0.9
3,131,686	-				-0.8
3,131,686	-				+1.0
3,131,686	-				-1.4
3,131,686	-				+0.9
3,131,692	-				-0.8
3,131,849	+				-0.1
3,131,849	+				+0.3
3,131,849	+				-1.1
3,131,849	+				-0.1
3,131,850	-				+0.1
3,131,850	-				+0.2
3,131,850	-				-1.1
3,131,850	-				+0.6
3,131,934	+				+0.2
3,131,934	+				-0.4
3,131,935	-				-1.3
3,131,935	-				-0.6
3,131,935	-				-0.1
3,131,935	-				+0.1
3,131,935	-				-2.3
3,131,935	-				+0.8
3,131,935	-				-1.6
3,132,083	+		OKGIIK_14340	0.15	+0.3
3,132,084	-		OKGIIK_14340	0.15	-0.8
3,132,084	-		OKGIIK_14340	0.15	+0.1
3,132,084	-		OKGIIK_14340	0.15	-0.1
3,132,084	-		OKGIIK_14340	0.15	-1.8
3,132,143	+		OKGIIK_14340	0.18	+0.9
3,132,143	+		OKGIIK_14340	0.18	-1.1
3,132,143	+		OKGIIK_14340	0.18	-0.1
3,132,144	-		OKGIIK_14340	0.18	+0.6
3,132,144	-		OKGIIK_14340	0.18	+2.5
3,132,144	-		OKGIIK_14340	0.18	-1.3
3,132,144	-		OKGIIK_14340	0.18	-0.3
3,132,144	-		OKGIIK_14340	0.18	-1.3
3,132,152	+		OKGIIK_14340	0.19	+0.6
3,132,152	+		OKGIIK_14340	0.19	+1.2
3,132,153	-		OKGIIK_14340	0.19	-0.9
3,132,153	-		OKGIIK_14340	0.19	+1.5
3,132,153	-		OKGIIK_14340	0.19	-0.4
3,132,155	+		OKGIIK_14340	0.19	-0.7
3,132,155	+		OKGIIK_14340	0.19	-0.4
3,132,155	+		OKGIIK_14340	0.19	+0.5
3,132,156	-		OKGIIK_14340	0.19	-0.1
3,132,156	-		OKGIIK_14340	0.19	-0.1
3,132,156	-		OKGIIK_14340	0.19	+1.4
3,132,156	-		OKGIIK_14340	0.19	-1.1
3,132,179	+		OKGIIK_14340	0.21	-0.0
3,132,179	+		OKGIIK_14340	0.21	+0.5
3,132,179	+		OKGIIK_14340	0.21	-0.9
3,132,179	+		OKGIIK_14340	0.21	-1.1
3,132,179	+		OKGIIK_14340	0.21	+0.5
3,132,179	+		OKGIIK_14340	0.21	+0.6
3,132,179	+		OKGIIK_14340	0.21	-0.2
3,132,180	-		OKGIIK_14340	0.21	+0.2
3,132,180	-		OKGIIK_14340	0.21	-0.7
3,132,180	-		OKGIIK_14340	0.21	-0.6
3,132,180	-		OKGIIK_14340	0.21	+0.3
3,132,180	-		OKGIIK_14340	0.21	-0.9
3,132,180	-		OKGIIK_14340	0.21	-1.1
3,132,180	-		OKGIIK_14340	0.21	-0.2
3,132,180	-		OKGIIK_14340	0.21	+1.2
3,132,180	-		OKGIIK_14340	0.21	-1.4
3,132,185	+		OKGIIK_14340	0.21	-0.3
3,132,185	+		OKGIIK_14340	0.21	+0.3
3,132,185	+		OKGIIK_14340	0.21	-0.1
3,132,185	+		OKGIIK_14340	0.21	+0.1
3,132,185	+		OKGIIK_14340	0.21	-0.9
3,132,185	+		OKGIIK_14340	0.21	+0.3
3,132,186	-		OKGIIK_14340	0.21	+1.3
3,132,186	-		OKGIIK_14340	0.21	+1.3
3,132,186	-		OKGIIK_14340	0.21	-0.4
3,132,195	+		OKGIIK_14340	0.21	-0.4
3,132,195	+		OKGIIK_14340	0.21	+0.9
3,132,196	-		OKGIIK_14340	0.22	-0.1
3,132,196	-		OKGIIK_14340	0.22	-0.6
3,132,231	+		OKGIIK_14340	0.24	+0.9
3,132,231	+		OKGIIK_14340	0.24	+0.5
3,132,231	+		OKGIIK_14340	0.24	-1.5
3,132,232	-		OKGIIK_14340	0.24	-1.0
3,132,232	-		OKGIIK_14340	0.24	+0.2
3,132,232	-		OKGIIK_14340	0.24	+1.6
3,132,232	-		OKGIIK_14340	0.24	+0.5
3,132,232	-		OKGIIK_14340	0.24	+1.6
3,132,232	-		OKGIIK_14340	0.24	+1.0
3,132,232	-		OKGIIK_14340	0.24	+0.9
3,132,232	-		OKGIIK_14340	0.24	+0.3
3,132,232	-		OKGIIK_14340	0.24	-1.1
3,132,232	-		OKGIIK_14340	0.24	-0.3
3,132,232	-		OKGIIK_14340	0.24	-2.2
3,132,304	+		OKGIIK_14340	0.28	-0.9
3,132,304	+		OKGIIK_14340	0.28	-0.2
3,132,304	+		OKGIIK_14340	0.28	-1.6
3,132,304	+		OKGIIK_14340	0.28	-1.1
3,132,304	+		OKGIIK_14340	0.28	+0.1
3,132,304	+		OKGIIK_14340	0.28	+0.8
3,132,304	+		OKGIIK_14340	0.28	-0.4
3,132,304	+		OKGIIK_14340	0.28	+0.4
3,132,304	+		OKGIIK_14340	0.28	-0.5
3,132,304	+		OKGIIK_14340	0.28	+0.9
3,132,304	+		OKGIIK_14340	0.28	-1.2
3,132,304	+		OKGIIK_14340	0.28	-0.5
3,132,304	+		OKGIIK_14340	0.28	+1.1
3,132,304	+		OKGIIK_14340	0.28	-0.6
3,132,304	+		OKGIIK_14340	0.28	+0.2
3,132,304	+		OKGIIK_14340	0.28	-0.7
3,132,304	+		OKGIIK_14340	0.28	+0.6
3,132,304	+		OKGIIK_14340	0.28	+1.0
3,132,304	+		OKGIIK_14340	0.28	-2.8
3,132,304	+		OKGIIK_14340	0.28	+1.1
3,132,304	+		OKGIIK_14340	0.28	-0.5
3,132,304	+		OKGIIK_14340	0.28	+0.2
3,132,304	+		OKGIIK_14340	0.28	-0.3
3,132,304	+		OKGIIK_14340	0.28	+0.6
3,132,304	+		OKGIIK_14340	0.28	+0.1
3,132,304	+		OKGIIK_14340	0.28	+1.2
3,132,304	+		OKGIIK_14340	0.28	-0.4
3,132,304	+		OKGIIK_14340	0.28	+0.2
3,132,304	+		OKGIIK_14340	0.28	+1.5
3,132,304	+		OKGIIK_14340	0.28	-0.1
3,132,304	+		OKGIIK_14340	0.28	-0.7
3,132,305	-		OKGIIK_14340	0.28	-1.4
3,132,305	-		OKGIIK_14340	0.28	+0.6
3,132,305	-		OKGIIK_14340	0.28	-0.8
3,132,305	-		OKGIIK_14340	0.28	+0.0
3,132,305	-		OKGIIK_14340	0.28	+0.2
3,132,305	-		OKGIIK_14340	0.28	+0.9
3,132,305	-		OKGIIK_14340	0.28	+2.4
3,132,305	-		OKGIIK_14340	0.28	+0.5
3,132,305	-		OKGIIK_14340	0.28	-0.2
3,132,305	-		OKGIIK_14340	0.28	-0.2
3,132,305	-		OKGIIK_14340	0.28	-0.9
3,132,305	-		OKGIIK_14340	0.28	+0.2
3,132,305	-		OKGIIK_14340	0.28	+1.2
3,132,305	-		OKGIIK_14340	0.28	-1.4
3,132,305	-		OKGIIK_14340	0.28	-1.6
3,132,305	-		OKGIIK_14340	0.28	+1.2
3,132,305	-		OKGIIK_14340	0.28	-0.6
3,132,305	-		OKGIIK_14340	0.28	+1.9
3,132,305	-		OKGIIK_14340	0.28	-1.1
3,132,305	-		OKGIIK_14340	0.28	-0.4
3,132,305	-		OKGIIK_14340	0.28	+0.0
3,132,305	-		OKGIIK_14340	0.28	+1.0
3,132,305	-		OKGIIK_14340	0.28	-0.9
3,132,305	-		OKGIIK_14340	0.28	+3.0
3,132,305	-		OKGIIK_14340	0.28	+0.7
3,132,305	-		OKGIIK_14340	0.28	-0.2
3,132,305	-		OKGIIK_14340	0.28	-1.0
3,132,305	-		OKGIIK_14340	0.28	+1.3
3,132,305	-		OKGIIK_14340	0.28	+1.2
3,132,329	+		OKGIIK_14340	0.30	+0.5
3,132,329	+		OKGIIK_14340	0.30	-0.9
3,132,329	+		OKGIIK_14340	0.30	-1.1
3,132,329	+		OKGIIK_14340	0.30	-0.8
3,132,329	+		OKGIIK_14340	0.30	+0.1
3,132,329	+		OKGIIK_14340	0.30	-0.1
3,132,329	+		OKGIIK_14340	0.30	-1.1
3,132,330	-		OKGIIK_14340	0.30	-1.7
3,132,330	-		OKGIIK_14340	0.30	-0.3
3,132,330	-		OKGIIK_14340	0.30	-0.9
3,132,330	-		OKGIIK_14340	0.30	+1.5
3,132,330	-		OKGIIK_14340	0.30	+0.2
3,132,330	-		OKGIIK_14340	0.30	+0.9
3,132,330	-		OKGIIK_14340	0.30	-0.5
3,132,330	-		OKGIIK_14340	0.30	+0.5
3,132,330	-		OKGIIK_14340	0.30	+0.6
3,132,330	-		OKGIIK_14340	0.30	-0.8
3,132,330	-		OKGIIK_14340	0.30	+0.6
3,132,330	-		OKGIIK_14340	0.30	+0.6
3,132,371	+		OKGIIK_14340	0.32	-0.9
3,132,372	-		OKGIIK_14340	0.32	+0.2
3,132,686	+		OKGIIK_14340	0.52	-1.3
3,132,686	+		OKGIIK_14340	0.52	+0.3
3,132,686	+		OKGIIK_14340	0.52	+0.9
3,132,686	+		OKGIIK_14340	0.52	-0.4
3,132,686	+		OKGIIK_14340	0.52	+0.3
3,132,687	-		OKGIIK_14340	0.52	-1.1
3,132,687	-		OKGIIK_14340	0.52	-0.4
3,132,687	-		OKGIIK_14340	0.52	-0.9
3,132,687	-		OKGIIK_14340	0.52	+0.8
3,132,687	-		OKGIIK_14340	0.52	-0.4
3,132,687	-		OKGIIK_14340	0.52	-1.4
3,132,687	-		OKGIIK_14340	0.52	-2.0
3,132,782	+		OKGIIK_14340	0.58	-0.7
3,132,782	+		OKGIIK_14340	0.58	-1.1
3,132,782	+		OKGIIK_14340	0.58	-0.9
3,132,783	-		OKGIIK_14340	0.58	+0.1
3,133,016	+		OKGIIK_14340	0.72	+1.2
3,133,016	+		OKGIIK_14340	0.72	+1.5
3,133,016	+		OKGIIK_14340	0.72	-0.1
3,133,016	+		OKGIIK_14340	0.72	+1.3
3,133,016	+		OKGIIK_14340	0.72	+0.9
3,133,016	+		OKGIIK_14340	0.72	+0.1
3,133,016	+		OKGIIK_14340	0.72	+0.7
3,133,016	+		OKGIIK_14340	0.72	+1.1
3,133,016	+		OKGIIK_14340	0.72	-0.2
3,133,016	+		OKGIIK_14340	0.72	+0.4
3,133,016	+		OKGIIK_14340	0.72	-0.1
3,133,017	-		OKGIIK_14340	0.72	+0.2
3,133,017	-		OKGIIK_14340	0.72	+0.3
3,133,017	-		OKGIIK_14340	0.72	-0.1
3,133,017	-		OKGIIK_14340	0.72	+0.3
3,133,017	-		OKGIIK_14340	0.72	-0.7
3,133,017	-		OKGIIK_14340	0.72	+0.2
3,133,017	-		OKGIIK_14340	0.72	+0.9
3,133,017	-		OKGIIK_14340	0.72	-2.0
3,133,017	-		OKGIIK_14340	0.72	+0.1
3,133,403	+				+1.3
3,133,403	+				-0.7
3,133,403	+				-2.1
3,133,403	+				-0.1
3,133,403	+				-0.3
3,133,403	+				-1.4
3,133,403	+				+1.2
3,133,404	-				-1.1
3,133,404	-				+1.5
3,133,404	-				-1.9
3,133,404	-				-2.1
3,133,404	-				-0.8
3,133,404	-				-1.3
3,133,404	-				-1.2
3,133,404	-				-0.2
3,133,404	-				+0.3
3,133,404	-				-0.6
3,133,404	-				-0.3
3,133,404	-				-0.6
3,133,404	-				+0.4
3,133,446	+				-2.7
3,133,447	-				-1.7
3,133,447	-				+1.2
3,133,447	-				+0.1
3,133,447	-				+0.1
3,133,447	-				-0.9
3,133,447	-				-2.5
3,133,447	-				-1.0
3,133,472	+				+0.9
3,133,472	+				-0.3
3,133,472	+				-0.2
3,133,472	+				+0.8
3,133,472	+				+0.7
3,133,472	+				+0.9
3,133,473	-				+0.0
3,133,473	-				-0.5
3,133,473	-				+0.4
3,133,473	-				-0.4
3,133,473	-				-1.6
3,133,473	-				-0.9
3,133,473	-				-0.3
3,133,473	-				+0.4
3,133,473	-				-0.1
3,133,473	-				-0.4
3,133,473	-				-0.9
3,133,473	-				-0.9
3,133,473	-				-0.9
3,133,473	-				-0.1
3,133,473	-				-1.1
3,133,474	-				+0.2
3,133,474	-				+0.9
3,133,727	+				-0.1
3,133,973	+	nagA	OKGIIK_14345	0.24	+0.4
3,133,973	+	nagA	OKGIIK_14345	0.24	-0.3
3,133,973	+	nagA	OKGIIK_14345	0.24	-1.6
3,133,973	+	nagA	OKGIIK_14345	0.24	-1.1
3,133,973	+	nagA	OKGIIK_14345	0.24	-2.7
3,133,974	-	nagA	OKGIIK_14345	0.24	-0.6
3,133,974	-	nagA	OKGIIK_14345	0.24	-0.1
3,133,974	-	nagA	OKGIIK_14345	0.24	-0.7
3,133,974	-	nagA	OKGIIK_14345	0.24	-0.1
3,133,974	-	nagA	OKGIIK_14345	0.24	+0.3
3,133,974	-	nagA	OKGIIK_14345	0.24	-0.9
3,133,974	-	nagA	OKGIIK_14345	0.24	-0.1
3,133,974	-	nagA	OKGIIK_14345	0.24	-1.9
3,133,974	-	nagA	OKGIIK_14345	0.24	-0.5
3,133,974	-	nagA	OKGIIK_14345	0.24	-0.9
3,133,974	-	nagA	OKGIIK_14345	0.24	-1.4
3,133,974	-	nagA	OKGIIK_14345	0.24	-0.4
3,134,232	-	nagA	OKGIIK_14345	0.45	+0.3
3,134,390	+	nagA	OKGIIK_14345	0.58	-0.7
3,134,390	+	nagA	OKGIIK_14345	0.58	-0.4
3,134,390	+	nagA	OKGIIK_14345	0.58	-0.4
3,134,390	+	nagA	OKGIIK_14345	0.58	-0.4
3,134,391	-	nagA	OKGIIK_14345	0.58	-1.4
3,134,391	-	nagA	OKGIIK_14345	0.58	-1.1
3,134,429	+	nagA	OKGIIK_14345	0.61	-0.2
3,134,429	+	nagA	OKGIIK_14345	0.61	-0.4
3,134,430	-	nagA	OKGIIK_14345	0.61	-1.2
3,134,430	-	nagA	OKGIIK_14345	0.61	-2.0