Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_13285

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
2,865,712	+		OKGIIK_13280	0.39	+0.2
2,865,712	+		OKGIIK_13280	0.39	-0.1
2,865,712	+		OKGIIK_13280	0.39	-1.0
2,865,712	+		OKGIIK_13280	0.39	-1.3
2,865,712	+		OKGIIK_13280	0.39	-1.8
2,865,713	-		OKGIIK_13280	0.39	-1.0
2,865,934	-		OKGIIK_13280	0.76	-1.0
2,865,960	-		OKGIIK_13280	0.80	+0.5
2,866,043	+				+1.5
2,866,043	+				-0.1
2,866,043	+				+1.9
2,866,043	+				+0.6
2,866,043	+				-1.1
2,866,043	+				-1.9
2,866,043	+				+1.2
2,866,043	+				-0.9
2,866,044	-				+0.3
2,866,044	-				-1.4
2,866,044	-				+0.5
2,866,044	-				+0.3
2,866,044	-				+0.3
2,866,044	-				+1.6
2,866,044	-				-1.4
2,866,044	-				+1.1
2,866,044	-				+1.2
2,866,044	-				+0.3
2,866,044	-				-0.4
2,866,044	-				-1.4
2,866,089	+				+0.3
2,866,089	+				-0.1
2,866,089	+				-0.4
2,866,089	+				-0.5
2,866,089	+				-0.8
2,866,089	+				+0.3
2,866,089	+				+0.1
2,866,089	+				+1.0
2,866,089	+				-0.9
2,866,089	+				+0.0
2,866,089	+				-0.9
2,866,089	+				+0.3
2,866,089	+				+0.3
2,866,089	+				-0.4
2,866,089	+				-1.0
2,866,089	+				-0.4
2,866,089	+				-0.3
2,866,089	+				+0.1
2,866,089	+				-0.7
2,866,090	-				+1.6
2,866,090	-				-0.4
2,866,090	-				-1.3
2,866,090	-				+1.3
2,866,090	-				+0.6
2,866,090	-				-0.1
2,866,090	-				-0.7
2,866,090	-				-0.2
2,866,090	-				-0.2
2,866,090	-				-0.0
2,866,090	-				-0.0
2,866,090	-				-0.4
2,866,090	-				+1.3
2,866,090	-				-0.9
2,866,090	-				-0.4
2,866,090	-				-0.1
2,866,090	-				-0.4
2,866,090	-				-1.1
2,866,090	-				-1.4
2,866,125	+				-2.7
2,866,125	+				-0.5
2,866,125	+				-2.9
2,866,125	+				+0.5
2,866,178	+		OKGIIK_13285	0.11	+0.7
2,866,178	+		OKGIIK_13285	0.11	+1.1
2,866,178	+		OKGIIK_13285	0.11	+1.2
2,866,178	+		OKGIIK_13285	0.11	-1.2
2,866,178	+		OKGIIK_13285	0.11	-1.7
2,866,178	+		OKGIIK_13285	0.11	+0.3
2,866,178	+		OKGIIK_13285	0.11	-0.1
2,866,179	-		OKGIIK_13285	0.11	-1.3
2,866,179	-		OKGIIK_13285	0.11	-0.7
2,866,179	-		OKGIIK_13285	0.11	-2.1
2,866,185	+		OKGIIK_13285	0.12	+0.7
2,866,185	+		OKGIIK_13285	0.12	-0.0
2,866,185	+		OKGIIK_13285	0.12	-0.5
2,866,185	+		OKGIIK_13285	0.12	+0.9
2,866,185	+		OKGIIK_13285	0.12	-1.8
2,866,185	+		OKGIIK_13285	0.12	-0.9
2,866,185	+		OKGIIK_13285	0.12	-0.7
2,866,185	+		OKGIIK_13285	0.12	+0.5
2,866,185	+		OKGIIK_13285	0.12	-0.3
2,866,185	+		OKGIIK_13285	0.12	-0.1
2,866,185	+		OKGIIK_13285	0.12	-0.7
2,866,185	+		OKGIIK_13285	0.12	-0.5
2,866,185	+		OKGIIK_13285	0.12	-0.4
2,866,185	+		OKGIIK_13285	0.12	-0.4
2,866,185	+		OKGIIK_13285	0.12	-0.9
2,866,185	+		OKGIIK_13285	0.12	-0.0
2,866,185	+		OKGIIK_13285	0.12	-1.7
2,866,186	-		OKGIIK_13285	0.13	-0.7
2,866,186	-		OKGIIK_13285	0.13	-0.4
2,866,186	-		OKGIIK_13285	0.13	-0.8
2,866,186	-		OKGIIK_13285	0.13	+1.6
2,866,186	-		OKGIIK_13285	0.13	+0.0
2,866,186	-		OKGIIK_13285	0.13	-1.4
2,866,186	-		OKGIIK_13285	0.13	-1.4
2,866,186	-		OKGIIK_13285	0.13	+0.2
2,866,186	-		OKGIIK_13285	0.13	-0.0
2,866,186	-		OKGIIK_13285	0.13	-0.1
2,866,283	-		OKGIIK_13285	0.28	-0.3
2,866,283	-		OKGIIK_13285	0.28	+1.5
2,866,283	-		OKGIIK_13285	0.28	-0.7
2,866,325	+		OKGIIK_13285	0.35	-0.4
2,866,326	-		OKGIIK_13285	0.35	-0.1
2,866,338	+		OKGIIK_13285	0.37	-0.1
2,866,338	+		OKGIIK_13285	0.37	-1.4
2,866,339	-		OKGIIK_13285	0.37	-0.6
2,866,339	-		OKGIIK_13285	0.37	-0.3
2,866,339	-		OKGIIK_13285	0.37	-0.1
2,866,339	-		OKGIIK_13285	0.37	-0.0
2,866,339	-		OKGIIK_13285	0.37	+0.6
2,866,339	-		OKGIIK_13285	0.37	+0.9
2,866,353	+		OKGIIK_13285	0.39	-2.0
2,866,483	+		OKGIIK_13285	0.60	-2.1
2,866,483	+		OKGIIK_13285	0.60	+1.5
2,866,483	+		OKGIIK_13285	0.60	+1.3
2,866,484	-		OKGIIK_13285	0.60	+1.8
2,866,484	-		OKGIIK_13285	0.60	-1.1
2,866,484	-		OKGIIK_13285	0.60	-2.1
2,866,494	+		OKGIIK_13285	0.61	+0.7
2,866,494	+		OKGIIK_13285	0.61	+0.1
2,866,494	+		OKGIIK_13285	0.61	-0.4
2,866,494	+		OKGIIK_13285	0.61	-0.7
2,866,495	-		OKGIIK_13285	0.62	+0.6
2,866,495	-		OKGIIK_13285	0.62	+1.4
2,866,495	-		OKGIIK_13285	0.62	-0.1
2,866,495	-		OKGIIK_13285	0.62	+0.2
2,866,495	-		OKGIIK_13285	0.62	-1.3
2,866,495	-		OKGIIK_13285	0.62	+0.3
2,866,495	-		OKGIIK_13285	0.62	+0.1
2,866,495	-		OKGIIK_13285	0.62	-1.2
2,866,495	-		OKGIIK_13285	0.62	-0.1
2,866,558	+		OKGIIK_13285	0.72	-1.7
2,866,559	-		OKGIIK_13285	0.72	+0.7
2,866,559	-		OKGIIK_13285	0.72	-0.6
2,866,775	-				+0.6
2,866,866	+				+0.9
2,866,866	+				-0.8
2,866,867	-				-0.5
2,866,867	-				-0.8
2,866,867	-				-0.1
2,866,867	-				+0.3
2,866,877	+				+0.3
2,866,878	-				-0.1
2,866,878	-				+0.5
2,866,878	-				+1.1
2,866,906	+				+1.5
2,866,906	+				-1.9
2,866,907	-				-1.0
2,866,907	-				-1.1
2,866,913	-				+0.7
2,866,913	-				+0.2
2,866,926	+				+0.7
2,866,926	+				-0.4
2,866,926	+				-0.4
2,866,926	+				-0.6
2,866,926	+				+0.5
2,866,927	-				+0.8
2,866,927	-				+0.6
2,866,927	-				+1.9
2,866,950	+				-0.4
2,866,950	+				-0.2
2,866,950	+				-0.5
2,866,950	+				-0.5
2,866,950	+				+1.3
2,866,950	+				-0.2
2,866,951	-				+0.2
2,867,214	+	wcaG	OKGIIK_13290	0.22	-1.7
2,867,214	+	wcaG	OKGIIK_13290	0.22	-2.2
2,867,214	+	wcaG	OKGIIK_13290	0.22	+0.6
2,867,214	+	wcaG	OKGIIK_13290	0.22	+0.2
2,867,214	+	wcaG	OKGIIK_13290	0.22	-0.8
2,867,215	-	wcaG	OKGIIK_13290	0.22	-1.0
2,867,215	-	wcaG	OKGIIK_13290	0.22	-1.1
2,867,215	-	wcaG	OKGIIK_13290	0.22	-1.4
2,867,241	+	wcaG	OKGIIK_13290	0.24	-0.1
2,867,241	+	wcaG	OKGIIK_13290	0.24	+0.0
2,867,241	+	wcaG	OKGIIK_13290	0.24	+1.5
2,867,242	-	wcaG	OKGIIK_13290	0.24	-0.7
2,867,367	+	wcaG	OKGIIK_13290	0.37	-1.1
2,867,367	+	wcaG	OKGIIK_13290	0.37	+0.5
2,867,367	+	wcaG	OKGIIK_13290	0.37	+0.1
2,867,445	+	wcaG	OKGIIK_13290	0.44	+0.2
2,867,445	+	wcaG	OKGIIK_13290	0.44	-1.5
2,867,445	+	wcaG	OKGIIK_13290	0.44	-1.3
2,867,446	-	wcaG	OKGIIK_13290	0.44	-0.6
2,867,446	-	wcaG	OKGIIK_13290	0.44	+0.9
2,867,446	-	wcaG	OKGIIK_13290	0.44	-0.5
2,867,487	+	wcaG	OKGIIK_13290	0.48	+0.1
2,867,487	+	wcaG	OKGIIK_13290	0.48	-1.8
2,867,487	+	wcaG	OKGIIK_13290	0.48	-2.2
2,867,487	+	wcaG	OKGIIK_13290	0.48	-1.7
2,867,487	+	wcaG	OKGIIK_13290	0.48	+0.1
2,867,488	-	wcaG	OKGIIK_13290	0.48	-1.1
2,867,488	-	wcaG	OKGIIK_13290	0.48	+1.2
2,867,488	-	wcaG	OKGIIK_13290	0.48	+1.3
2,867,562	+	wcaG	OKGIIK_13290	0.56	-0.7
2,867,600	-	wcaG	OKGIIK_13290	0.59	+0.3
2,867,622	+	wcaG	OKGIIK_13290	0.62	-2.2
2,867,622	+	wcaG	OKGIIK_13290	0.62	-0.1
2,867,622	+	wcaG	OKGIIK_13290	0.62	-2.1
2,867,623	-	wcaG	OKGIIK_13290	0.62	-0.8
2,867,623	-	wcaG	OKGIIK_13290	0.62	-0.1
2,867,623	-	wcaG	OKGIIK_13290	0.62	+0.1
2,867,623	-	wcaG	OKGIIK_13290	0.62	+0.6