Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_12575

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
2,707,828	+				-0.0
2,707,829	-				-0.1
2,707,829	-				-1.7
2,707,829	-				-2.9
2,707,829	-				-0.1
2,707,896	+				-0.4
2,707,896	+				-0.0
2,707,896	+				-0.2
2,707,896	+				+0.5
2,707,896	+				+0.7
2,707,896	+				+0.7
2,707,896	+				+0.2
2,707,896	+				-0.2
2,707,896	+				-1.9
2,707,896	+				-0.9
2,707,897	-				+0.4
2,707,897	-				-1.5
2,707,897	-				-1.0
2,707,897	-				+0.4
2,707,897	-				-0.4
2,707,897	-				+0.3
2,707,897	-				+1.2
2,707,900	+				+1.0
2,707,900	+				+0.5
2,707,900	+				-0.4
2,707,900	+				+1.3
2,707,900	+				+0.2
2,707,900	+				-0.0
2,707,900	+				+0.4
2,707,900	+				+0.6
2,707,901	-				-0.4
2,707,901	-				+1.2
2,707,901	-				+0.4
2,708,105	-		OKGIIK_12565	0.66	-1.0
2,708,105	-		OKGIIK_12565	0.66	+0.4
2,708,105	-		OKGIIK_12565	0.66	-0.0
2,708,105	-		OKGIIK_12565	0.66	-0.5
2,708,105	-		OKGIIK_12565	0.66	+0.5
2,708,105	-		OKGIIK_12565	0.66	+1.7
2,708,371	-				-0.4
2,708,371	-				-1.2
2,708,631	-		OKGIIK_12570	0.80	-1.3
2,708,631	-		OKGIIK_12570	0.80	+1.2
2,708,747	+				+0.2
2,708,747	+				-0.0
2,708,748	-				-0.6
2,708,748	-				+0.7
2,708,748	-				-1.4
2,708,748	-				-0.2
2,708,748	-				+0.3
2,708,805	+				+0.3
2,709,017	-	rpoE	OKGIIK_12575	0.34	-1.4
2,709,023	-	rpoE	OKGIIK_12575	0.35	-0.4
2,709,061	+	rpoE	OKGIIK_12575	0.42	-0.0
2,709,062	-	rpoE	OKGIIK_12575	0.42	-0.7
2,709,062	-	rpoE	OKGIIK_12575	0.42	+2.0
2,709,062	-	rpoE	OKGIIK_12575	0.42	+1.0
2,709,134	-	rpoE	OKGIIK_12575	0.54	-0.4
2,709,134	-	rpoE	OKGIIK_12575	0.54	-0.7
2,709,134	-	rpoE	OKGIIK_12575	0.54	-0.6
2,709,261	-	rpoE	OKGIIK_12575	0.76	-1.5
2,709,262	+	rpoE	OKGIIK_12575	0.76	-0.5
2,709,262	+	rpoE	OKGIIK_12575	0.76	+0.6
2,709,262	+	rpoE	OKGIIK_12575	0.76	+2.4
2,709,262	+	rpoE	OKGIIK_12575	0.76	-0.8
2,709,262	+	rpoE	OKGIIK_12575	0.76	-0.0
2,709,262	+	rpoE	OKGIIK_12575	0.76	-1.5
2,709,262	+	rpoE	OKGIIK_12575	0.76	-0.5
2,709,262	+	rpoE	OKGIIK_12575	0.76	+0.7
2,709,262	+	rpoE	OKGIIK_12575	0.76	-0.2
2,709,262	+	rpoE	OKGIIK_12575	0.76	-0.8
2,709,262	+	rpoE	OKGIIK_12575	0.76	+0.7
2,709,263	-	rpoE	OKGIIK_12575	0.76	-0.4
2,709,263	-	rpoE	OKGIIK_12575	0.76	-0.4
2,709,263	-	rpoE	OKGIIK_12575	0.76	+0.1
2,709,263	-	rpoE	OKGIIK_12575	0.76	-2.2
2,709,263	-	rpoE	OKGIIK_12575	0.76	+0.5
2,709,263	-	rpoE	OKGIIK_12575	0.76	+0.5
2,709,263	-	rpoE	OKGIIK_12575	0.76	+1.3
2,709,263	-	rpoE	OKGIIK_12575	0.76	-0.4
2,709,266	-	rpoE	OKGIIK_12575	0.77	-0.5
2,709,266	-	rpoE	OKGIIK_12575	0.77	-1.9
2,709,266	-	rpoE	OKGIIK_12575	0.77	+1.5
2,709,266	-	rpoE	OKGIIK_12575	0.77	+2.2
2,709,266	-	rpoE	OKGIIK_12575	0.77	-0.2
2,709,266	-	rpoE	OKGIIK_12575	0.77	-2.7
2,709,266	-	rpoE	OKGIIK_12575	0.77	+0.7
2,709,266	-	rpoE	OKGIIK_12575	0.77	+0.7
2,709,266	-	rpoE	OKGIIK_12575	0.77	-0.6
2,709,718	+		OKGIIK_12580	0.67	+0.1
2,709,718	+		OKGIIK_12580	0.67	-0.0
2,709,726	+		OKGIIK_12580	0.69	-2.1
2,709,726	+		OKGIIK_12580	0.69	+0.3
2,709,726	+		OKGIIK_12580	0.69	-0.4
2,709,726	+		OKGIIK_12580	0.69	+0.6
2,709,727	-		OKGIIK_12580	0.69	+0.2
2,709,879	-				+0.1
2,710,024	+				+0.8
2,710,024	+				-1.0
2,710,024	+				+1.1
2,710,024	+				-0.0
2,710,024	+				-1.5
2,710,024	+				-0.6
2,710,024	+				+1.4
2,710,025	-				+1.2
2,710,025	-				-2.0
2,710,025	-				-1.5
2,710,025	-				-0.5
2,710,025	-				-0.6
2,710,108	+	dapB	OKGIIK_12585	0.11	-1.6
2,710,108	+	dapB	OKGIIK_12585	0.11	+0.2
2,710,108	+	dapB	OKGIIK_12585	0.11	+0.1
2,710,108	+	dapB	OKGIIK_12585	0.11	-0.6
2,710,109	-	dapB	OKGIIK_12585	0.11	-1.6
2,710,188	+	dapB	OKGIIK_12585	0.21	-1.1
2,710,188	+	dapB	OKGIIK_12585	0.21	+0.0
2,710,188	+	dapB	OKGIIK_12585	0.21	+1.5
2,710,189	-	dapB	OKGIIK_12585	0.21	+0.8
2,710,189	-	dapB	OKGIIK_12585	0.21	+1.6
2,710,329	+	dapB	OKGIIK_12585	0.38	-2.1
2,710,330	-	dapB	OKGIIK_12585	0.38	-0.6
2,710,330	-	dapB	OKGIIK_12585	0.38	+1.5
2,710,330	-	dapB	OKGIIK_12585	0.38	-0.6
2,710,330	-	dapB	OKGIIK_12585	0.38	+0.2
2,710,330	-	dapB	OKGIIK_12585	0.38	+0.2
2,710,330	-	dapB	OKGIIK_12585	0.38	-0.0
2,710,363	+	dapB	OKGIIK_12585	0.42	-1.2
2,710,369	+	dapB	OKGIIK_12585	0.43	-1.0
2,710,369	+	dapB	OKGIIK_12585	0.43	-2.0
2,710,369	+	dapB	OKGIIK_12585	0.43	-0.0
2,710,370	-	dapB	OKGIIK_12585	0.43	+0.6
2,710,370	-	dapB	OKGIIK_12585	0.43	-0.8
2,710,370	-	dapB	OKGIIK_12585	0.43	-1.3
2,710,370	-	dapB	OKGIIK_12585	0.43	-0.0
2,710,370	-	dapB	OKGIIK_12585	0.43	+0.8
2,710,370	-	dapB	OKGIIK_12585	0.43	-0.5
2,710,370	-	dapB	OKGIIK_12585	0.43	-0.6
2,710,370	-	dapB	OKGIIK_12585	0.43	+0.3