Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_11330

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
2,430,713	+		OKGIIK_11325	0.32	-0.5
2,430,713	+		OKGIIK_11325	0.32	+0.2
2,430,714	-		OKGIIK_11325	0.32	+0.3
2,430,794	+		OKGIIK_11325	0.38	+0.0
2,430,794	+		OKGIIK_11325	0.38	-0.3
2,430,794	+		OKGIIK_11325	0.38	+2.0
2,430,794	+		OKGIIK_11325	0.38	+0.4
2,430,795	-		OKGIIK_11325	0.38	-0.7
2,430,795	-		OKGIIK_11325	0.38	-0.3
2,430,795	-		OKGIIK_11325	0.38	-0.8
2,430,795	-		OKGIIK_11325	0.38	-1.0
2,430,815	+		OKGIIK_11325	0.39	+0.6
2,430,816	-		OKGIIK_11325	0.40	+0.9
2,430,884	+		OKGIIK_11325	0.45	+0.2
2,430,884	+		OKGIIK_11325	0.45	-0.2
2,430,884	+		OKGIIK_11325	0.45	-0.3
2,430,884	+		OKGIIK_11325	0.45	-0.9
2,430,885	-		OKGIIK_11325	0.45	+1.7
2,430,885	-		OKGIIK_11325	0.45	-1.2
2,430,885	-		OKGIIK_11325	0.45	-0.2
2,430,902	+		OKGIIK_11325	0.46	-0.8
2,430,903	-		OKGIIK_11325	0.46	-1.7
2,430,977	+		OKGIIK_11325	0.52	-2.9
2,430,977	+		OKGIIK_11325	0.52	+0.9
2,430,977	+		OKGIIK_11325	0.52	+0.2
2,430,977	+		OKGIIK_11325	0.52	-0.5
2,430,977	+		OKGIIK_11325	0.52	+0.8
2,430,977	+		OKGIIK_11325	0.52	+1.0
2,430,977	+		OKGIIK_11325	0.52	+1.3
2,430,977	+		OKGIIK_11325	0.52	-0.2
2,430,977	+		OKGIIK_11325	0.52	+0.2
2,430,977	+		OKGIIK_11325	0.52	+0.8
2,430,977	+		OKGIIK_11325	0.52	-1.3
2,430,977	+		OKGIIK_11325	0.52	-0.9
2,430,977	+		OKGIIK_11325	0.52	-0.1
2,430,977	+		OKGIIK_11325	0.52	-0.3
2,430,977	+		OKGIIK_11325	0.52	+0.3
2,430,977	+		OKGIIK_11325	0.52	-0.7
2,430,977	+		OKGIIK_11325	0.52	+1.0
2,430,977	+		OKGIIK_11325	0.52	-0.7
2,430,977	+		OKGIIK_11325	0.52	+0.4
2,430,977	+		OKGIIK_11325	0.52	-1.2
2,430,978	-		OKGIIK_11325	0.52	-0.8
2,430,978	-		OKGIIK_11325	0.52	+0.1
2,430,978	-		OKGIIK_11325	0.52	+0.2
2,430,978	-		OKGIIK_11325	0.52	-0.7
2,430,978	-		OKGIIK_11325	0.52	-3.1
2,430,978	-		OKGIIK_11325	0.52	-1.3
2,430,978	-		OKGIIK_11325	0.52	-1.0
2,430,978	-		OKGIIK_11325	0.52	-0.3
2,430,978	-		OKGIIK_11325	0.52	+0.1
2,430,978	-		OKGIIK_11325	0.52	+0.8
2,430,978	-		OKGIIK_11325	0.52	+0.8
2,430,978	-		OKGIIK_11325	0.52	-0.5
2,430,978	-		OKGIIK_11325	0.52	+0.7
2,430,978	-		OKGIIK_11325	0.52	-1.1
2,430,978	-		OKGIIK_11325	0.52	+1.0
2,430,978	-		OKGIIK_11325	0.52	-0.6
2,430,978	-		OKGIIK_11325	0.52	-0.4
2,430,978	-		OKGIIK_11325	0.52	-0.5
2,430,978	-		OKGIIK_11325	0.52	-1.0
2,430,978	-		OKGIIK_11325	0.52	-0.3
2,430,982	-		OKGIIK_11325	0.52	-0.2
2,431,008	+		OKGIIK_11325	0.54	-1.3
2,431,009	-		OKGIIK_11325	0.54	-0.6
2,431,022	+		OKGIIK_11325	0.55	+2.0
2,431,023	-		OKGIIK_11325	0.55	+2.0
2,431,186	-		OKGIIK_11325	0.68	+0.2
2,431,251	-		OKGIIK_11325	0.73	-1.4
2,431,313	+		OKGIIK_11325	0.77	+1.6
2,431,313	+		OKGIIK_11325	0.77	-0.6
2,431,313	+		OKGIIK_11325	0.77	-0.7
2,431,313	+		OKGIIK_11325	0.77	-0.6
2,431,314	-		OKGIIK_11325	0.77	-0.8
2,431,314	-		OKGIIK_11325	0.77	-2.1
2,431,314	-		OKGIIK_11325	0.77	-0.3
2,431,370	+		OKGIIK_11325	0.82	-1.3
2,431,370	+		OKGIIK_11325	0.82	+1.3
2,431,370	+		OKGIIK_11325	0.82	-0.0
2,431,370	+		OKGIIK_11325	0.82	-0.7
2,431,371	-		OKGIIK_11325	0.82	-1.0
2,431,371	-		OKGIIK_11325	0.82	+0.1
2,431,496	+				-0.3
2,431,497	-				-1.7
2,431,497	-				-0.6
2,431,497	-				-0.8
2,431,497	-				-0.0
2,431,595	+				-0.4
2,431,595	+				+0.3
2,431,595	+				-2.3
2,431,595	+				+1.0
2,431,595	+				-0.7
2,431,595	+				-1.0
2,431,595	+				-2.4
2,431,595	+				-1.6
2,431,596	-				-0.3
2,431,596	-				+0.7
2,431,596	-				-0.3
2,431,596	-				+1.4
2,431,596	-				-0.3
2,431,596	-				-0.0
2,431,596	-				-0.8
2,431,596	-				+0.7
2,431,596	-				+1.4
2,431,598	+				-1.7
2,431,598	+				-0.3
2,431,598	+				-0.1
2,431,598	+				-0.6
2,431,599	-				-1.5
2,431,638	+				-1.3
2,432,020	+	lolD	OKGIIK_11330	0.43	-0.6
2,432,248	+	lolD	OKGIIK_11330	0.74	-1.0
2,432,248	+	lolD	OKGIIK_11330	0.74	-0.3
2,432,248	+	lolD	OKGIIK_11330	0.74	-0.0
2,432,248	+	lolD	OKGIIK_11330	0.74	-0.8
2,432,249	-	lolD	OKGIIK_11330	0.75	+0.2
2,432,249	-	lolD	OKGIIK_11330	0.75	+0.4
2,432,377	+				+0.0
2,432,377	+				-0.9
2,432,377	+				+0.2
2,432,377	+				+0.3
2,432,377	+				-0.3
2,432,378	-				-0.3
2,432,378	-				+0.1
2,432,402	-				-0.8
2,432,555	+				+0.8
2,432,760	+		OKGIIK_11335	0.13	+1.4
2,432,761	-		OKGIIK_11335	0.13	-0.8
2,432,761	-		OKGIIK_11335	0.13	-0.8
2,432,761	-		OKGIIK_11335	0.13	+0.2
2,432,766	+		OKGIIK_11335	0.13	+0.4
2,432,766	+		OKGIIK_11335	0.13	-0.2
2,432,766	+		OKGIIK_11335	0.13	-0.4
2,432,766	+		OKGIIK_11335	0.13	-0.0
2,432,766	+		OKGIIK_11335	0.13	-2.1
2,432,766	+		OKGIIK_11335	0.13	-0.6
2,432,767	-		OKGIIK_11335	0.13	+0.2
2,432,767	-		OKGIIK_11335	0.13	-0.8
2,432,767	-		OKGIIK_11335	0.13	+0.2
2,432,767	-		OKGIIK_11335	0.13	-2.0
2,433,415	-		OKGIIK_11335	0.64	-0.3
2,433,415	-		OKGIIK_11335	0.64	-2.1