Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_11320

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
2,428,090	+		OKGIIK_11315	0.38	+0.3
2,428,091	-		OKGIIK_11315	0.38	-0.1
2,428,091	-		OKGIIK_11315	0.38	+1.2
2,428,102	+		OKGIIK_11315	0.39	+0.2
2,428,102	+		OKGIIK_11315	0.39	+0.7
2,428,103	-		OKGIIK_11315	0.39	-1.5
2,428,103	-		OKGIIK_11315	0.39	+0.1
2,428,103	-		OKGIIK_11315	0.39	-0.1
2,428,103	-		OKGIIK_11315	0.39	+0.8
2,428,150	+		OKGIIK_11315	0.42	+0.1
2,428,150	+		OKGIIK_11315	0.42	+0.2
2,428,150	+		OKGIIK_11315	0.42	+0.5
2,428,150	+		OKGIIK_11315	0.42	+0.4
2,428,150	+		OKGIIK_11315	0.42	+1.6
2,428,150	+		OKGIIK_11315	0.42	+1.0
2,428,151	-		OKGIIK_11315	0.42	+0.6
2,428,151	-		OKGIIK_11315	0.42	+0.4
2,428,151	-		OKGIIK_11315	0.42	-1.8
2,428,151	-		OKGIIK_11315	0.42	-0.3
2,428,151	-		OKGIIK_11315	0.42	+0.6
2,428,369	+		OKGIIK_11315	0.59	-0.8
2,428,501	+		OKGIIK_11315	0.69	+0.7
2,428,501	+		OKGIIK_11315	0.69	+0.4
2,428,612	+		OKGIIK_11315	0.77	-0.0
2,428,612	+		OKGIIK_11315	0.77	+0.4
2,428,612	+		OKGIIK_11315	0.77	+0.8
2,428,612	+		OKGIIK_11315	0.77	-0.0
2,428,612	+		OKGIIK_11315	0.77	+1.5
2,428,612	+		OKGIIK_11315	0.77	+0.7
2,428,613	-		OKGIIK_11315	0.77	-0.8
2,428,613	-		OKGIIK_11315	0.77	-1.3
2,428,613	-		OKGIIK_11315	0.77	-1.5
2,428,613	-		OKGIIK_11315	0.77	-1.1
2,428,613	-		OKGIIK_11315	0.77	-0.2
2,428,613	-		OKGIIK_11315	0.77	-0.0
2,428,669	+		OKGIIK_11315	0.82	+0.2
2,428,669	+		OKGIIK_11315	0.82	-0.0
2,428,669	+		OKGIIK_11315	0.82	-1.6
2,428,669	+		OKGIIK_11315	0.82	+0.8
2,428,669	+		OKGIIK_11315	0.82	+1.2
2,428,669	+		OKGIIK_11315	0.82	-1.7
2,428,898	-				-1.5
2,428,900	+				+0.1
2,428,901	-				-1.5
2,428,901	-				-1.8
2,428,901	-				-0.6
2,428,901	-				+0.8
2,428,901	-				+0.2
2,428,901	-				-0.0
2,428,901	-				-0.7
2,428,901	-				+0.2
2,428,901	-				+0.7
2,428,901	-				-0.0
2,428,901	-				-2.2
2,428,971	-				+0.4
2,429,155	+				+0.9
2,429,156	-				-1.2
2,429,156	-				-1.2
2,429,275	+	salY	OKGIIK_11320	0.18	+1.7
2,429,275	+	salY	OKGIIK_11320	0.18	-1.0
2,429,275	+	salY	OKGIIK_11320	0.18	+1.1
2,429,275	+	salY	OKGIIK_11320	0.18	-0.7
2,429,275	+	salY	OKGIIK_11320	0.18	-0.6
2,429,276	-	salY	OKGIIK_11320	0.19	-0.2
2,429,276	-	salY	OKGIIK_11320	0.19	-2.0
2,429,444	-	salY	OKGIIK_11320	0.32	-1.3
2,429,444	-	salY	OKGIIK_11320	0.32	-1.7
2,429,444	-	salY	OKGIIK_11320	0.32	-1.0
2,429,444	-	salY	OKGIIK_11320	0.32	-1.3
2,429,444	-	salY	OKGIIK_11320	0.32	-0.0
2,429,444	-	salY	OKGIIK_11320	0.32	-0.0
2,429,467	+	salY	OKGIIK_11320	0.34	-0.0
2,429,467	+	salY	OKGIIK_11320	0.34	+0.1
2,429,467	+	salY	OKGIIK_11320	0.34	-0.1
2,429,467	+	salY	OKGIIK_11320	0.34	-0.0
2,429,467	+	salY	OKGIIK_11320	0.34	+0.9
2,429,467	+	salY	OKGIIK_11320	0.34	+0.4
2,429,468	-	salY	OKGIIK_11320	0.34	-0.6
2,429,518	+	salY	OKGIIK_11320	0.38	+1.1
2,429,518	+	salY	OKGIIK_11320	0.38	-1.1
2,429,518	+	salY	OKGIIK_11320	0.38	+0.6
2,429,519	-	salY	OKGIIK_11320	0.38	-1.5
2,429,519	-	salY	OKGIIK_11320	0.38	-1.0
2,429,581	+	salY	OKGIIK_11320	0.43	-0.8
2,429,581	+	salY	OKGIIK_11320	0.43	+0.2
2,429,581	+	salY	OKGIIK_11320	0.43	-0.2
2,429,581	+	salY	OKGIIK_11320	0.43	-0.6
2,429,581	+	salY	OKGIIK_11320	0.43	+0.4
2,429,581	+	salY	OKGIIK_11320	0.43	-1.5
2,429,581	+	salY	OKGIIK_11320	0.43	+0.8
2,429,582	-	salY	OKGIIK_11320	0.43	-1.2
2,429,582	-	salY	OKGIIK_11320	0.43	-0.0
2,429,582	-	salY	OKGIIK_11320	0.43	+1.2
2,429,582	-	salY	OKGIIK_11320	0.43	-0.6
2,429,582	-	salY	OKGIIK_11320	0.43	+1.3
2,429,582	-	salY	OKGIIK_11320	0.43	+0.5
2,429,584	+	salY	OKGIIK_11320	0.43	-0.5
2,429,584	+	salY	OKGIIK_11320	0.43	-0.2
2,429,584	+	salY	OKGIIK_11320	0.43	-0.0
2,429,584	+	salY	OKGIIK_11320	0.43	-0.3
2,429,584	+	salY	OKGIIK_11320	0.43	-0.5
2,429,584	+	salY	OKGIIK_11320	0.43	-1.6
2,429,584	+	salY	OKGIIK_11320	0.43	+1.1
2,429,584	+	salY	OKGIIK_11320	0.43	+0.9
2,429,584	+	salY	OKGIIK_11320	0.43	+0.5
2,429,585	-	salY	OKGIIK_11320	0.43	-0.8
2,429,585	-	salY	OKGIIK_11320	0.43	-0.3
2,429,585	-	salY	OKGIIK_11320	0.43	-2.2
2,429,585	-	salY	OKGIIK_11320	0.43	+0.5
2,429,585	-	salY	OKGIIK_11320	0.43	+0.1
2,429,585	-	salY	OKGIIK_11320	0.43	-0.3
2,429,585	-	salY	OKGIIK_11320	0.43	-1.1
2,429,638	+	salY	OKGIIK_11320	0.48	+0.6
2,429,638	+	salY	OKGIIK_11320	0.48	+0.2
2,429,638	+	salY	OKGIIK_11320	0.48	-0.5
2,429,638	+	salY	OKGIIK_11320	0.48	-2.3
2,429,638	+	salY	OKGIIK_11320	0.48	-0.5
2,429,722	+	salY	OKGIIK_11320	0.54	-0.3
2,429,722	+	salY	OKGIIK_11320	0.54	-1.0
2,429,723	-	salY	OKGIIK_11320	0.55	-1.1
2,429,905	+	salY	OKGIIK_11320	0.69	+0.5
2,429,906	-	salY	OKGIIK_11320	0.69	+0.1
2,429,986	+	salY	OKGIIK_11320	0.76	-0.0
2,430,098	+	salY	OKGIIK_11320	0.85	-0.1
2,430,098	+	salY	OKGIIK_11320	0.85	+0.8
2,430,098	+	salY	OKGIIK_11320	0.85	-1.7
2,430,098	+	salY	OKGIIK_11320	0.85	+0.1
2,430,098	+	salY	OKGIIK_11320	0.85	-0.6
2,430,098	+	salY	OKGIIK_11320	0.85	-1.5
2,430,098	+	salY	OKGIIK_11320	0.85	+1.5
2,430,098	+	salY	OKGIIK_11320	0.85	-1.2
2,430,099	-	salY	OKGIIK_11320	0.85	+0.1
2,430,099	-	salY	OKGIIK_11320	0.85	+1.0
2,430,099	-	salY	OKGIIK_11320	0.85	-1.7
2,430,099	-	salY	OKGIIK_11320	0.85	-0.5
2,430,244	+				-1.5
2,430,244	+				+0.1
2,430,245	-				-1.6
2,430,245	-				+0.1
2,430,282	-				-1.9
2,430,354	-				-0.7
2,430,354	-				+0.6
2,430,539	+		OKGIIK_11325	0.18	-0.0
2,430,539	+		OKGIIK_11325	0.18	-0.2
2,430,539	+		OKGIIK_11325	0.18	-0.8
2,430,539	+		OKGIIK_11325	0.18	+1.7
2,430,540	-		OKGIIK_11325	0.18	+0.8
2,430,540	-		OKGIIK_11325	0.18	+0.1
2,430,540	-		OKGIIK_11325	0.18	-0.6
2,430,540	-		OKGIIK_11325	0.18	-1.9
2,430,540	-		OKGIIK_11325	0.18	-2.1
2,430,540	-		OKGIIK_11325	0.18	-0.6
2,430,540	-		OKGIIK_11325	0.18	+0.9
2,430,540	-		OKGIIK_11325	0.18	-0.0
2,430,548	+		OKGIIK_11325	0.19	+0.2
2,430,548	+		OKGIIK_11325	0.19	-0.8
2,430,548	+		OKGIIK_11325	0.19	+0.4
2,430,548	+		OKGIIK_11325	0.19	-0.5
2,430,549	-		OKGIIK_11325	0.19	+2.9
2,430,549	-		OKGIIK_11325	0.19	-2.5
2,430,549	-		OKGIIK_11325	0.19	+1.7
2,430,549	-		OKGIIK_11325	0.19	+0.5
2,430,713	+		OKGIIK_11325	0.32	-0.5
2,430,713	+		OKGIIK_11325	0.32	+0.2
2,430,714	-		OKGIIK_11325	0.32	+0.3
2,430,794	+		OKGIIK_11325	0.38	+0.0
2,430,794	+		OKGIIK_11325	0.38	-0.3
2,430,794	+		OKGIIK_11325	0.38	+2.0
2,430,794	+		OKGIIK_11325	0.38	+0.4
2,430,795	-		OKGIIK_11325	0.38	-0.7
2,430,795	-		OKGIIK_11325	0.38	-0.3
2,430,795	-		OKGIIK_11325	0.38	-0.8
2,430,795	-		OKGIIK_11325	0.38	-1.0
2,430,815	+		OKGIIK_11325	0.39	+0.6
2,430,816	-		OKGIIK_11325	0.40	+0.9
2,430,884	+		OKGIIK_11325	0.45	+0.2
2,430,884	+		OKGIIK_11325	0.45	-0.2
2,430,884	+		OKGIIK_11325	0.45	-0.3
2,430,884	+		OKGIIK_11325	0.45	-0.9
2,430,885	-		OKGIIK_11325	0.45	+1.7
2,430,885	-		OKGIIK_11325	0.45	-1.2
2,430,885	-		OKGIIK_11325	0.45	-0.2
2,430,902	+		OKGIIK_11325	0.46	-0.8
2,430,903	-		OKGIIK_11325	0.46	-1.7
2,430,977	+		OKGIIK_11325	0.52	-2.9
2,430,977	+		OKGIIK_11325	0.52	+0.9
2,430,977	+		OKGIIK_11325	0.52	+0.2
2,430,977	+		OKGIIK_11325	0.52	-0.5
2,430,977	+		OKGIIK_11325	0.52	+0.8
2,430,977	+		OKGIIK_11325	0.52	+1.0
2,430,977	+		OKGIIK_11325	0.52	+1.3
2,430,977	+		OKGIIK_11325	0.52	-0.2
2,430,977	+		OKGIIK_11325	0.52	+0.2
2,430,977	+		OKGIIK_11325	0.52	+0.8
2,430,977	+		OKGIIK_11325	0.52	-1.3
2,430,977	+		OKGIIK_11325	0.52	-0.9
2,430,977	+		OKGIIK_11325	0.52	-0.1
2,430,977	+		OKGIIK_11325	0.52	-0.3
2,430,977	+		OKGIIK_11325	0.52	+0.3
2,430,977	+		OKGIIK_11325	0.52	-0.7
2,430,977	+		OKGIIK_11325	0.52	+1.0
2,430,977	+		OKGIIK_11325	0.52	-0.7
2,430,977	+		OKGIIK_11325	0.52	+0.4
2,430,977	+		OKGIIK_11325	0.52	-1.2
2,430,978	-		OKGIIK_11325	0.52	-0.8
2,430,978	-		OKGIIK_11325	0.52	+0.1
2,430,978	-		OKGIIK_11325	0.52	+0.2
2,430,978	-		OKGIIK_11325	0.52	-0.7
2,430,978	-		OKGIIK_11325	0.52	-3.1
2,430,978	-		OKGIIK_11325	0.52	-1.3
2,430,978	-		OKGIIK_11325	0.52	-1.0
2,430,978	-		OKGIIK_11325	0.52	-0.3
2,430,978	-		OKGIIK_11325	0.52	+0.1
2,430,978	-		OKGIIK_11325	0.52	+0.8
2,430,978	-		OKGIIK_11325	0.52	+0.8
2,430,978	-		OKGIIK_11325	0.52	-0.5
2,430,978	-		OKGIIK_11325	0.52	+0.7
2,430,978	-		OKGIIK_11325	0.52	-1.1
2,430,978	-		OKGIIK_11325	0.52	+1.0
2,430,978	-		OKGIIK_11325	0.52	-0.6
2,430,978	-		OKGIIK_11325	0.52	-0.4
2,430,978	-		OKGIIK_11325	0.52	-0.5
2,430,978	-		OKGIIK_11325	0.52	-1.0
2,430,978	-		OKGIIK_11325	0.52	-0.3
2,430,982	-		OKGIIK_11325	0.52	-0.2
2,431,008	+		OKGIIK_11325	0.54	-1.3
2,431,009	-		OKGIIK_11325	0.54	-0.6
2,431,022	+		OKGIIK_11325	0.55	+2.0
2,431,023	-		OKGIIK_11325	0.55	+2.0
2,431,186	-		OKGIIK_11325	0.68	+0.2
2,431,251	-		OKGIIK_11325	0.73	-1.4