Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_10915

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
2,337,403	+		OKGIIK_10910	0.37	-0.9
2,337,403	+		OKGIIK_10910	0.37	-0.9
2,337,403	+		OKGIIK_10910	0.37	-1.1
2,337,404	-		OKGIIK_10910	0.37	+1.1
2,337,404	-		OKGIIK_10910	0.37	-0.3
2,337,460	+		OKGIIK_10910	0.40	+2.3
2,337,460	+		OKGIIK_10910	0.40	+0.3
2,337,461	-		OKGIIK_10910	0.40	+1.2
2,337,461	-		OKGIIK_10910	0.40	-1.3
2,337,461	-		OKGIIK_10910	0.40	+1.1
2,337,461	-		OKGIIK_10910	0.40	-0.1
2,337,557	+		OKGIIK_10910	0.47	+0.5
2,337,557	+		OKGIIK_10910	0.47	-0.5
2,337,557	+		OKGIIK_10910	0.47	-0.2
2,337,557	+		OKGIIK_10910	0.47	-0.2
2,337,558	-		OKGIIK_10910	0.47	+1.6
2,337,558	-		OKGIIK_10910	0.47	-1.4
2,337,558	-		OKGIIK_10910	0.47	-1.5
2,337,558	-		OKGIIK_10910	0.47	+0.1
2,337,558	-		OKGIIK_10910	0.47	-1.5
2,337,558	-		OKGIIK_10910	0.47	-0.7
2,337,558	-		OKGIIK_10910	0.47	-0.5
2,337,558	-		OKGIIK_10910	0.47	-0.4
2,337,558	-		OKGIIK_10910	0.47	-1.1
2,337,566	+		OKGIIK_10910	0.47	+0.1
2,337,566	+		OKGIIK_10910	0.47	+0.1
2,337,566	+		OKGIIK_10910	0.47	-1.6
2,337,566	+		OKGIIK_10910	0.47	-0.2
2,337,566	+		OKGIIK_10910	0.47	-0.9
2,337,567	-		OKGIIK_10910	0.47	+0.5
2,337,567	-		OKGIIK_10910	0.47	-0.5
2,337,567	-		OKGIIK_10910	0.47	+0.1
2,337,567	-		OKGIIK_10910	0.47	-1.5
2,337,646	+		OKGIIK_10910	0.52	+2.1
2,337,646	+		OKGIIK_10910	0.52	-0.4
2,337,646	+		OKGIIK_10910	0.52	+0.8
2,337,646	+		OKGIIK_10910	0.52	-0.5
2,337,646	+		OKGIIK_10910	0.52	-2.4
2,337,647	-		OKGIIK_10910	0.52	-0.5
2,337,647	-		OKGIIK_10910	0.52	-0.8
2,337,647	-		OKGIIK_10910	0.52	+0.7
2,337,647	-		OKGIIK_10910	0.52	+2.4
2,337,647	-		OKGIIK_10910	0.52	+0.6
2,337,647	-		OKGIIK_10910	0.52	-1.9
2,337,856	+		OKGIIK_10910	0.66	+1.3
2,337,856	+		OKGIIK_10910	0.66	-0.3
2,337,856	+		OKGIIK_10910	0.66	+0.1
2,337,856	+		OKGIIK_10910	0.66	+1.6
2,337,856	+		OKGIIK_10910	0.66	-0.6
2,337,857	-		OKGIIK_10910	0.66	+0.1
2,337,857	-		OKGIIK_10910	0.66	+0.6
2,338,003	+		OKGIIK_10910	0.75	-1.2
2,338,004	-		OKGIIK_10910	0.75	-0.5
2,338,526	+	copY	OKGIIK_10915	0.41	+1.1
2,338,526	+	copY	OKGIIK_10915	0.41	+2.1
2,338,526	+	copY	OKGIIK_10915	0.41	+0.6
2,338,526	+	copY	OKGIIK_10915	0.41	-0.5
2,338,527	-	copY	OKGIIK_10915	0.42	+1.5
2,338,527	-	copY	OKGIIK_10915	0.42	+0.7
2,338,527	-	copY	OKGIIK_10915	0.42	-2.4
2,338,527	-	copY	OKGIIK_10915	0.42	+0.5
2,338,527	-	copY	OKGIIK_10915	0.42	-0.3
2,338,527	-	copY	OKGIIK_10915	0.42	-0.9
2,338,527	-	copY	OKGIIK_10915	0.42	+0.1
2,338,527	-	copY	OKGIIK_10915	0.42	-1.4
2,338,527	-	copY	OKGIIK_10915	0.42	+0.3
2,338,527	-	copY	OKGIIK_10915	0.42	+0.4
2,338,527	-	copY	OKGIIK_10915	0.42	+1.3
2,338,553	+	copY	OKGIIK_10915	0.49	+0.7
2,338,553	+	copY	OKGIIK_10915	0.49	-0.9
2,338,553	+	copY	OKGIIK_10915	0.49	-0.5
2,338,553	+	copY	OKGIIK_10915	0.49	+0.6
2,338,553	+	copY	OKGIIK_10915	0.49	-0.2
2,338,553	+	copY	OKGIIK_10915	0.49	+0.1
2,338,553	+	copY	OKGIIK_10915	0.49	-0.1
2,338,554	-	copY	OKGIIK_10915	0.49	+0.5
2,338,554	-	copY	OKGIIK_10915	0.49	-0.9
2,338,554	-	copY	OKGIIK_10915	0.49	+0.2
2,338,559	+	copY	OKGIIK_10915	0.50	+1.3
2,338,613	-	copY	OKGIIK_10915	0.65	-0.3
2,338,613	-	copY	OKGIIK_10915	0.65	-1.0
2,338,755	+				+1.4
2,338,779	+				-1.4
2,338,779	+				+1.3
2,338,788	-				-0.8
2,338,920	+				-1.8
2,338,920	+				-0.7
2,338,920	+				-1.2
2,338,921	-				-1.1
2,338,921	-				+0.5
2,339,196	+		OKGIIK_10920	0.20	-0.3
2,339,197	-		OKGIIK_10920	0.20	-0.4
2,339,197	-		OKGIIK_10920	0.20	+1.5
2,339,271	+		OKGIIK_10920	0.27	-1.7
2,339,271	+		OKGIIK_10920	0.27	-0.2
2,339,271	+		OKGIIK_10920	0.27	+0.4
2,339,272	-		OKGIIK_10920	0.27	-2.1
2,339,272	-		OKGIIK_10920	0.27	-0.1
2,339,272	-		OKGIIK_10920	0.27	+0.4
2,339,272	-		OKGIIK_10920	0.27	+0.2
2,339,272	-		OKGIIK_10920	0.27	-1.9
2,339,393	+		OKGIIK_10920	0.38	-0.4
2,339,393	+		OKGIIK_10920	0.38	-0.8
2,339,393	+		OKGIIK_10920	0.38	+1.1
2,339,393	+		OKGIIK_10920	0.38	+0.1
2,339,393	+		OKGIIK_10920	0.38	+0.3
2,339,394	-		OKGIIK_10920	0.38	+0.1
2,339,394	-		OKGIIK_10920	0.38	+0.2
2,339,394	-		OKGIIK_10920	0.38	-0.3
2,339,394	-		OKGIIK_10920	0.38	-0.9
2,339,418	+		OKGIIK_10920	0.40	-0.3
2,339,418	+		OKGIIK_10920	0.40	-2.0
2,339,418	+		OKGIIK_10920	0.40	+0.9
2,339,419	-		OKGIIK_10920	0.40	+0.1
2,339,419	-		OKGIIK_10920	0.40	-1.3
2,339,419	-		OKGIIK_10920	0.40	+0.3
2,339,419	-		OKGIIK_10920	0.40	+0.4
2,339,419	-		OKGIIK_10920	0.40	-1.3
2,339,419	-		OKGIIK_10920	0.40	+1.6
2,339,419	-		OKGIIK_10920	0.40	+0.3
2,339,419	-		OKGIIK_10920	0.40	-0.7
2,339,419	-		OKGIIK_10920	0.40	-0.9
2,339,419	-		OKGIIK_10920	0.40	+0.2
2,339,419	-		OKGIIK_10920	0.40	-0.3