Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_10815

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
2,316,471	+	abrB	OKGIIK_10805	0.51	-1.4
2,316,471	+	abrB	OKGIIK_10805	0.51	-0.3
2,316,571	+				-1.3
2,316,572	-				+0.6
2,316,611	+				-0.7
2,316,612	-				-0.5
2,316,612	-				+1.0
2,316,621	+				+0.0
2,316,629	+				+0.5
2,316,629	+				-0.5
2,316,630	-				+0.2
2,316,648	+				+1.0
2,316,648	+				+0.0
2,316,648	+				+0.1
2,316,648	+				+0.2
2,316,648	+				-1.7
2,316,648	+				+1.0
2,316,648	+				-0.6
2,316,648	+				-1.0
2,316,648	+				+1.6
2,316,648	+				-0.3
2,316,648	+				-0.5
2,316,648	+				+0.5
2,316,648	+				+0.9
2,316,648	+				+0.0
2,316,648	+				+0.3
2,316,649	-				-1.3
2,316,649	-				+0.4
2,316,649	-				-1.1
2,316,649	-				+0.7
2,316,649	-				+0.0
2,316,649	-				+0.0
2,316,649	-				-0.1
2,316,649	-				+0.2
2,316,649	-				+1.4
2,316,649	-				+0.0
2,316,649	-				+0.8
2,316,649	-				-1.7
2,316,649	-				-0.2
2,316,649	-				+0.4
2,316,649	-				+0.0
2,316,649	-				-2.7
2,316,649	-				-1.3
2,316,649	-				+0.5
2,316,649	-				+0.5
2,316,649	-				+0.2
2,316,667	+				-0.5
2,316,667	+				-0.5
2,316,668	-				-1.7
2,316,668	-				-1.4
2,316,668	-				-0.5
2,316,668	-				+0.0
2,316,768	+				-1.1
2,316,769	-				+0.3
2,316,829	+				-0.5
2,316,829	+				+1.0
2,316,830	-				+0.1
2,316,830	-				-0.3
2,316,830	-				+2.5
2,316,830	-				+1.8
2,316,837	+				-1.4
2,316,837	+				+1.0
2,316,837	+				-2.7
2,316,837	+				+1.6
2,316,837	+				-0.5
2,316,837	+				+2.0
2,316,838	-				+1.3
2,316,838	-				+0.1
2,316,838	-				-1.7
2,316,838	-				+0.0
2,316,838	-				-1.1
2,316,838	-				+0.0
2,316,953	+				+0.7
2,316,953	+				-1.1
2,316,954	-				+0.2
2,316,954	-				-1.0
2,316,954	-				-0.8
2,316,954	-				-0.9
2,316,954	-				-1.3
2,316,954	-				+0.2
2,317,013	+		OKGIIK_10810	0.16	+0.4
2,317,013	+		OKGIIK_10810	0.16	-0.5
2,317,013	+		OKGIIK_10810	0.16	-0.1
2,317,013	+		OKGIIK_10810	0.16	-0.3
2,317,014	-		OKGIIK_10810	0.16	+0.0
2,317,014	-		OKGIIK_10810	0.16	-1.3
2,317,014	-		OKGIIK_10810	0.16	-0.2
2,317,021	+		OKGIIK_10810	0.18	-0.1
2,317,021	+		OKGIIK_10810	0.18	-0.5
2,317,021	+		OKGIIK_10810	0.18	+1.7
2,317,022	-		OKGIIK_10810	0.18	-1.4
2,317,022	-		OKGIIK_10810	0.18	-1.0
2,317,022	-		OKGIIK_10810	0.18	-0.8
2,317,022	-		OKGIIK_10810	0.18	+1.0
2,317,128	+		OKGIIK_10810	0.45	-1.9
2,317,129	+		OKGIIK_10810	0.45	+0.3
2,317,129	+		OKGIIK_10810	0.45	-1.2
2,317,129	+		OKGIIK_10810	0.45	-0.5
2,317,129	+		OKGIIK_10810	0.45	-1.5
2,317,129	+		OKGIIK_10810	0.45	+0.7
2,317,129	+		OKGIIK_10810	0.45	-1.1
2,317,130	-		OKGIIK_10810	0.45	+0.5
2,317,130	-		OKGIIK_10810	0.45	-0.0
2,317,130	-		OKGIIK_10810	0.45	-0.4
2,317,187	+		OKGIIK_10810	0.60	+0.0
2,317,188	+		OKGIIK_10810	0.60	-0.8
2,317,188	+		OKGIIK_10810	0.60	-0.5
2,317,188	+		OKGIIK_10810	0.60	-1.5
2,317,188	+		OKGIIK_10810	0.60	+0.7
2,317,189	-		OKGIIK_10810	0.60	-1.8
2,317,189	-		OKGIIK_10810	0.60	-1.0
2,317,431	+		OKGIIK_10815	0.26	-0.8
2,317,585	+		OKGIIK_10815	0.70	-0.3
2,317,585	+		OKGIIK_10815	0.70	+0.6
2,317,585	+		OKGIIK_10815	0.70	-0.5
2,317,585	+		OKGIIK_10815	0.70	+0.1
2,317,585	+		OKGIIK_10815	0.70	-0.5
2,317,585	+		OKGIIK_10815	0.70	-0.1
2,317,585	+		OKGIIK_10815	0.70	+0.5
2,317,585	+		OKGIIK_10815	0.70	-1.3
2,317,585	+		OKGIIK_10815	0.70	-1.3
2,317,585	+		OKGIIK_10815	0.70	-0.9
2,317,585	+		OKGIIK_10815	0.70	-1.1
2,317,585	+		OKGIIK_10815	0.70	-0.2
2,317,585	+		OKGIIK_10815	0.70	-0.8
2,317,585	+		OKGIIK_10815	0.70	-0.1
2,317,585	+		OKGIIK_10815	0.70	-0.5
2,317,586	-		OKGIIK_10815	0.70	-0.5
2,317,586	-		OKGIIK_10815	0.70	+0.6
2,317,586	-		OKGIIK_10815	0.70	+0.2
2,317,586	-		OKGIIK_10815	0.70	-1.3
2,317,586	-		OKGIIK_10815	0.70	-0.7
2,317,586	-		OKGIIK_10815	0.70	+0.5
2,317,586	-		OKGIIK_10815	0.70	-1.1
2,317,586	-		OKGIIK_10815	0.70	-2.0
2,317,622	-		OKGIIK_10815	0.80	+2.2
2,317,628	+		OKGIIK_10815	0.82	-2.4
2,317,735	+				-1.1
2,317,735	+				-0.5
2,317,735	+				-0.5
2,317,735	+				-1.1
2,317,776	+				+0.0
2,317,776	+				-1.1
2,317,776	+				+1.0
2,317,776	+				+0.2
2,317,776	+				-1.3
2,317,776	+				-1.4
2,317,776	+				+2.0
2,317,776	+				-1.3
2,317,776	+				-2.0
2,317,776	+				+1.0
2,317,776	+				-0.8
2,317,776	+				+0.7
2,317,776	+				+1.0
2,317,777	-				-1.4
2,317,777	-				+0.8
2,317,777	-				-0.5
2,317,777	-				-1.0
2,317,777	-				-0.0
2,317,777	-				-0.6
2,317,895	+				+1.6
2,317,895	+				-1.5
2,317,896	-				-0.3
2,318,103	+				+1.0
2,318,104	-				+1.0
2,318,104	-				+0.9
2,318,117	+				-0.5
2,318,117	+				+0.1
2,318,117	+				-0.0
2,318,117	+				-0.5
2,318,117	+				+2.0
2,318,117	+				-1.1
2,318,117	+				+0.5
2,318,117	+				+0.7
2,318,117	+				-0.4
2,318,117	+				-0.1
2,318,117	+				-0.2
2,318,117	+				-2.0
2,318,117	+				-0.8
2,318,117	+				+0.6
2,318,117	+				-0.5
2,318,117	+				-0.5
2,318,117	+				+0.5
2,318,117	+				+0.6
2,318,118	-				-0.5
2,318,118	-				+0.0
2,318,118	-				-2.0
2,318,118	-				+1.0
2,318,118	-				+1.0
2,318,118	-				+1.5
2,318,118	-				+0.8
2,318,118	-				+0.0
2,318,118	-				-0.5
2,318,118	-				-1.6
2,318,118	-				-1.8
2,318,118	-				-1.6
2,318,118	-				+1.3
2,318,118	-				-1.9
2,318,118	-				-1.3
2,318,118	-				+0.6
2,318,118	-				+1.6
2,318,118	-				-0.1
2,318,118	-				+0.9
2,318,118	-				-0.3
2,318,118	-				+0.5
2,318,118	-				-2.6
2,318,118	-				-0.8
2,318,118	-				+1.0
2,318,118	-				-0.2
2,318,140	+				+0.3
2,318,140	+				-0.8
2,318,140	+				+0.5
2,318,140	+				-0.3
2,318,140	+				-0.6
2,318,140	+				-2.4
2,318,140	+				-1.9
2,318,140	+				-0.5
2,318,140	+				-0.8
2,318,140	+				-0.9
2,318,140	+				-1.4
2,318,140	+				-1.1
2,318,141	-				+0.5
2,318,141	-				+0.8
2,318,141	-				-0.3
2,318,141	-				+1.3
2,318,141	-				+0.3
2,318,141	-				+1.0
2,318,182	+				+0.2
2,318,182	+				+0.2
2,318,182	+				-1.1
2,318,182	+				+0.7
2,318,182	+				+0.5
2,318,182	+				-1.8
2,318,182	+				-0.4
2,318,182	+				+1.2
2,318,182	+				-0.7
2,318,182	+				+0.0
2,318,182	+				-0.2
2,318,182	+				+1.6
2,318,182	+				+0.0
2,318,182	+				-2.6
2,318,182	+				-0.5
2,318,182	+				+0.1
2,318,182	+				-1.0
2,318,182	+				+1.8
2,318,182	+				+0.2
2,318,183	-				+1.7
2,318,183	-				+0.0
2,318,183	-				-1.0
2,318,183	-				-0.1
2,318,183	-				-0.8
2,318,183	-				-0.3
2,318,183	-				+1.3
2,318,183	-				-0.9
2,318,183	-				-0.8
2,318,352	+				-0.1
2,318,353	-				+0.6
2,318,353	-				+0.0
2,318,353	-				+1.0