Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_09510

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
2,061,176	+				+0.2
2,061,176	+				-1.4
2,061,176	+				-2.1
2,061,176	+				-0.4
2,061,177	-				+0.9
2,061,177	-				+1.3
2,061,177	-				+0.3
2,061,177	-				-1.5
2,061,214	+				-0.4
2,061,214	+				+0.7
2,061,214	+				+0.3
2,061,214	+				+0.6
2,061,214	+				+0.9
2,061,214	+				-0.8
2,061,214	+				-0.8
2,061,214	+				+0.0
2,061,214	+				-2.3
2,061,214	+				-1.4
2,061,214	+				-1.4
2,061,214	+				-1.0
2,061,214	+				-1.1
2,061,214	+				-0.4
2,061,215	-				-0.7
2,061,215	-				+0.9
2,061,215	-				+1.4
2,061,215	-				-0.5
2,061,215	-				-2.9
2,061,215	-				-2.0
2,061,215	-				-1.0
2,061,215	-				-2.2
2,061,215	-				-2.1
2,061,215	-				-0.7
2,061,215	-				-1.8
2,061,215	-				-1.2
2,061,223	+				-0.4
2,061,223	+				-2.1
2,061,223	+				-2.1
2,061,223	+				+1.4
2,061,223	+				+0.9
2,061,223	+				-1.2
2,061,223	+				-1.2
2,061,223	+				+0.6
2,061,223	+				+0.8
2,061,223	+				-1.1
2,061,223	+				-1.7
2,061,224	-				-1.2
2,061,224	-				+0.4
2,061,224	-				+1.0
2,061,224	-				-0.9
2,061,224	-				-0.3
2,061,224	-				+0.0
2,061,224	-				-0.0
2,061,224	-				+2.1
2,061,224	-				+0.6
2,061,224	-				-0.7
2,061,224	-				+0.3
2,061,375	+		OKGIIK_09510	0.18	-0.4
2,061,375	+		OKGIIK_09510	0.18	-1.0
2,061,375	+		OKGIIK_09510	0.18	-0.7
2,061,376	-		OKGIIK_09510	0.18	-2.4
2,061,376	-		OKGIIK_09510	0.18	-2.2
2,061,376	-		OKGIIK_09510	0.18	-1.0
2,061,571	+		OKGIIK_09510	0.41	+0.8
2,061,571	+		OKGIIK_09510	0.41	-1.5
2,061,571	+		OKGIIK_09510	0.41	+0.3
2,061,571	+		OKGIIK_09510	0.41	-1.1
2,061,571	+		OKGIIK_09510	0.41	-0.4
2,061,571	+		OKGIIK_09510	0.41	+0.5
2,061,571	+		OKGIIK_09510	0.41	-0.7
2,061,571	+		OKGIIK_09510	0.41	-0.7
2,061,571	+		OKGIIK_09510	0.41	-0.7
2,061,571	+		OKGIIK_09510	0.41	+0.0
2,061,571	+		OKGIIK_09510	0.41	-2.2
2,061,571	+		OKGIIK_09510	0.41	+0.5
2,061,571	+		OKGIIK_09510	0.41	-2.2
2,061,572	-		OKGIIK_09510	0.41	-0.8
2,061,572	-		OKGIIK_09510	0.41	-0.4
2,061,572	-		OKGIIK_09510	0.41	-0.7
2,061,572	-		OKGIIK_09510	0.41	-0.7
2,061,572	-		OKGIIK_09510	0.41	-1.8
2,061,572	-		OKGIIK_09510	0.41	-0.7
2,061,572	-		OKGIIK_09510	0.41	-0.3
2,061,572	-		OKGIIK_09510	0.41	+0.0
2,061,572	-		OKGIIK_09510	0.41	-0.5
2,061,631	+		OKGIIK_09510	0.48	+0.4
2,061,632	-		OKGIIK_09510	0.48	-1.2
2,061,905	-		OKGIIK_09510	0.81	-0.7
2,062,038	+				-0.2
2,062,038	+				-1.5
2,062,039	-				+0.2
2,062,039	-				-0.7
2,062,039	-				-1.5
2,062,039	-				-2.8
2,062,165	-	gph	OKGIIK_09515	0.15	-1.0
2,062,165	-	gph	OKGIIK_09515	0.15	-0.7
2,062,188	+	gph	OKGIIK_09515	0.18	-2.5
2,062,188	+	gph	OKGIIK_09515	0.18	-0.4
2,062,188	+	gph	OKGIIK_09515	0.18	-1.8
2,062,188	+	gph	OKGIIK_09515	0.18	+0.6
2,062,188	+	gph	OKGIIK_09515	0.18	-1.4
2,062,188	+	gph	OKGIIK_09515	0.18	+0.3
2,062,188	+	gph	OKGIIK_09515	0.18	-1.2
2,062,189	-	gph	OKGIIK_09515	0.18	-1.0
2,062,189	-	gph	OKGIIK_09515	0.18	-1.0
2,062,241	+	gph	OKGIIK_09515	0.26	-0.4
2,062,241	+	gph	OKGIIK_09515	0.26	+0.6
2,062,241	+	gph	OKGIIK_09515	0.26	-1.2
2,062,241	+	gph	OKGIIK_09515	0.26	-1.0
2,062,241	+	gph	OKGIIK_09515	0.26	+0.3
2,062,241	+	gph	OKGIIK_09515	0.26	-0.7
2,062,242	-	gph	OKGIIK_09515	0.26	-0.4
2,062,242	-	gph	OKGIIK_09515	0.26	-1.2
2,062,242	-	gph	OKGIIK_09515	0.26	-0.7
2,062,242	-	gph	OKGIIK_09515	0.26	-1.0
2,062,500	+	gph	OKGIIK_09515	0.64	-1.2
2,062,500	+	gph	OKGIIK_09515	0.64	-0.7
2,062,500	+	gph	OKGIIK_09515	0.64	+0.0
2,062,501	-	gph	OKGIIK_09515	0.64	-0.4
2,062,501	-	gph	OKGIIK_09515	0.64	-0.2
2,062,501	-	gph	OKGIIK_09515	0.64	-0.5
2,062,512	+	gph	OKGIIK_09515	0.66	-0.4
2,062,513	-	gph	OKGIIK_09515	0.66	-0.7
2,062,615	-	gph	OKGIIK_09515	0.81	-1.2
2,062,615	-	gph	OKGIIK_09515	0.81	-0.4
2,062,666	-	gph	OKGIIK_09515	0.88	+0.3