Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_08970

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
1,928,521	+		OKGIIK_08965	0.53	-0.6
1,928,521	+		OKGIIK_08965	0.53	-0.6
1,928,521	+		OKGIIK_08965	0.53	-0.1
1,928,521	+		OKGIIK_08965	0.53	+1.8
1,928,521	+		OKGIIK_08965	0.53	-1.1
1,928,522	-		OKGIIK_08965	0.53	+0.4
1,928,522	-		OKGIIK_08965	0.53	-0.4
1,928,522	-		OKGIIK_08965	0.53	-0.9
1,928,522	-		OKGIIK_08965	0.53	-0.3
1,928,522	-		OKGIIK_08965	0.53	+0.7
1,928,527	+		OKGIIK_08965	0.54	+0.8
1,928,527	+		OKGIIK_08965	0.54	-0.6
1,928,527	+		OKGIIK_08965	0.54	-2.5
1,928,527	+		OKGIIK_08965	0.54	+0.2
1,928,528	-		OKGIIK_08965	0.54	-0.3
1,928,528	-		OKGIIK_08965	0.54	+2.3
1,928,528	-		OKGIIK_08965	0.54	-0.5
1,928,528	-		OKGIIK_08965	0.54	+0.1
1,928,528	-		OKGIIK_08965	0.54	-1.6
1,928,528	-		OKGIIK_08965	0.54	+0.3
1,928,528	-		OKGIIK_08965	0.54	-0.6
1,928,528	-		OKGIIK_08965	0.54	-1.6
1,928,528	-		OKGIIK_08965	0.54	-0.8
1,928,528	-		OKGIIK_08965	0.54	-2.0
1,928,533	+		OKGIIK_08965	0.54	+1.2
1,928,533	+		OKGIIK_08965	0.54	+0.6
1,928,533	+		OKGIIK_08965	0.54	-0.3
1,928,548	+		OKGIIK_08965	0.55	+1.3
1,928,548	+		OKGIIK_08965	0.55	-0.3
1,928,548	+		OKGIIK_08965	0.55	-0.3
1,928,548	+		OKGIIK_08965	0.55	+0.7
1,928,548	+		OKGIIK_08965	0.55	+0.0
1,928,548	+		OKGIIK_08965	0.55	+0.7
1,928,549	-		OKGIIK_08965	0.55	-1.2
1,928,549	-		OKGIIK_08965	0.55	-0.8
1,928,549	-		OKGIIK_08965	0.55	+0.0
1,928,660	+		OKGIIK_08965	0.60	-0.1
1,928,707	+		OKGIIK_08965	0.62	+0.2
1,928,707	+		OKGIIK_08965	0.62	-0.8
1,928,707	+		OKGIIK_08965	0.62	+0.3
1,928,707	+		OKGIIK_08965	0.62	-0.6
1,928,707	+		OKGIIK_08965	0.62	-0.5
1,928,707	+		OKGIIK_08965	0.62	+0.4
1,928,708	-		OKGIIK_08965	0.62	+0.6
1,928,708	-		OKGIIK_08965	0.62	+1.0
1,928,708	-		OKGIIK_08965	0.62	-1.4
1,928,708	-		OKGIIK_08965	0.62	+0.1
1,928,708	-		OKGIIK_08965	0.62	+0.0
1,928,708	-		OKGIIK_08965	0.62	+1.7
1,928,708	-		OKGIIK_08965	0.62	-1.7
1,928,708	-		OKGIIK_08965	0.62	-0.3
1,928,708	-		OKGIIK_08965	0.62	-1.0
1,928,708	-		OKGIIK_08965	0.62	+0.7
1,928,708	-		OKGIIK_08965	0.62	-1.3
1,928,708	-		OKGIIK_08965	0.62	-0.8
1,928,708	-		OKGIIK_08965	0.62	-1.7
1,928,710	+		OKGIIK_08965	0.62	+0.1
1,928,710	+		OKGIIK_08965	0.62	+2.2
1,928,710	+		OKGIIK_08965	0.62	-0.6
1,928,710	+		OKGIIK_08965	0.62	+0.4
1,928,710	+		OKGIIK_08965	0.62	+0.2
1,928,711	-		OKGIIK_08965	0.62	+0.2
1,928,711	-		OKGIIK_08965	0.62	-1.0
1,928,711	-		OKGIIK_08965	0.62	-1.3
1,928,711	-		OKGIIK_08965	0.62	-0.6
1,928,812	+		OKGIIK_08965	0.67	-2.0
1,928,812	+		OKGIIK_08965	0.67	+0.3
1,928,812	+		OKGIIK_08965	0.67	+0.8
1,928,812	+		OKGIIK_08965	0.67	+1.4
1,928,812	+		OKGIIK_08965	0.67	-0.6
1,928,812	+		OKGIIK_08965	0.67	-0.7
1,928,813	-		OKGIIK_08965	0.67	+1.0
1,928,813	-		OKGIIK_08965	0.67	-0.1
1,928,813	-		OKGIIK_08965	0.67	+1.3
1,929,019	+		OKGIIK_08965	0.77	-2.4
1,929,019	+		OKGIIK_08965	0.77	+0.2
1,929,019	+		OKGIIK_08965	0.77	-0.1
1,929,020	-		OKGIIK_08965	0.77	+0.4
1,929,020	-		OKGIIK_08965	0.77	+0.7
1,929,025	+		OKGIIK_08965	0.77	-0.3
1,929,025	+		OKGIIK_08965	0.77	-0.3
1,929,025	+		OKGIIK_08965	0.77	-0.8
1,929,025	+		OKGIIK_08965	0.77	-0.6
1,929,026	-		OKGIIK_08965	0.77	-0.0
1,929,026	-		OKGIIK_08965	0.77	+0.6
1,929,026	-		OKGIIK_08965	0.77	-1.4
1,929,026	-		OKGIIK_08965	0.77	-1.5
1,929,121	+		OKGIIK_08965	0.82	-3.5
1,929,121	+		OKGIIK_08965	0.82	-0.4
1,929,121	+		OKGIIK_08965	0.82	+0.3
1,929,235	+		OKGIIK_08965	0.87	-0.9
1,929,352	+				+0.2
1,929,353	-				-0.1
1,929,353	-				-1.2
1,929,353	-				-1.7
1,929,355	+				-1.7
1,929,355	+				-1.2
1,929,356	-				-0.5
1,929,406	+				+1.3
1,929,406	+				+0.0
1,929,406	+				+0.0
1,929,406	+				-0.6
1,929,406	+				+0.0
1,929,407	-				-1.1
1,929,407	-				+0.4
1,929,407	-				+0.7
1,929,407	-				-1.1
1,929,407	-				-0.1
1,929,407	-				+0.6
1,929,407	-				-0.9
1,929,407	-				+1.2
1,929,530	+				+1.0
1,929,538	+				-1.3
1,929,538	+				-0.8
1,929,539	-				+0.4
1,929,659	-		OKGIIK_08970	0.13	-0.3
1,929,719	-		OKGIIK_08970	0.19	+1.6
1,929,719	-		OKGIIK_08970	0.19	-0.3
1,929,757	+		OKGIIK_08970	0.22	+1.4
1,929,925	+		OKGIIK_08970	0.37	-1.1
1,929,925	+		OKGIIK_08970	0.37	+0.5
1,929,925	+		OKGIIK_08970	0.37	+1.3
1,929,925	+		OKGIIK_08970	0.37	+0.0
1,929,925	+		OKGIIK_08970	0.37	+0.4
1,929,925	+		OKGIIK_08970	0.37	+0.0
1,929,925	+		OKGIIK_08970	0.37	-1.0
1,929,926	-		OKGIIK_08970	0.37	+0.6
1,929,926	-		OKGIIK_08970	0.37	-0.9
1,929,928	+		OKGIIK_08970	0.37	-0.2
1,929,928	+		OKGIIK_08970	0.37	+0.2
1,929,928	+		OKGIIK_08970	0.37	-1.4
1,929,928	+		OKGIIK_08970	0.37	+0.0
1,929,928	+		OKGIIK_08970	0.37	-0.5
1,929,929	-		OKGIIK_08970	0.37	-0.1
1,929,929	-		OKGIIK_08970	0.37	-1.1
1,929,929	-		OKGIIK_08970	0.37	+1.6
1,929,929	-		OKGIIK_08970	0.37	+0.8
1,929,929	-		OKGIIK_08970	0.37	+1.3
1,929,964	+		OKGIIK_08970	0.40	-1.4
1,929,964	+		OKGIIK_08970	0.40	+0.5
1,929,964	+		OKGIIK_08970	0.40	-1.1
1,929,964	+		OKGIIK_08970	0.40	-0.9
1,929,964	+		OKGIIK_08970	0.40	-1.0
1,929,964	+		OKGIIK_08970	0.40	-0.1
1,929,964	+		OKGIIK_08970	0.40	-1.2
1,929,965	-		OKGIIK_08970	0.40	+0.2
1,929,965	-		OKGIIK_08970	0.40	+0.0
1,929,965	-		OKGIIK_08970	0.40	-1.0
1,929,965	-		OKGIIK_08970	0.40	+0.0
1,930,072	+		OKGIIK_08970	0.50	-0.4
1,930,072	+		OKGIIK_08970	0.50	+1.0
1,930,073	-		OKGIIK_08970	0.50	+0.4
1,930,183	+		OKGIIK_08970	0.60	+0.6
1,930,183	+		OKGIIK_08970	0.60	+0.7
1,930,183	+		OKGIIK_08970	0.60	-0.3
1,930,184	-		OKGIIK_08970	0.60	-1.0
1,930,184	-		OKGIIK_08970	0.60	-0.2
1,930,342	+		OKGIIK_08970	0.74	+2.0
1,930,342	+		OKGIIK_08970	0.74	+0.0
1,930,342	+		OKGIIK_08970	0.74	-1.1
1,930,343	-		OKGIIK_08970	0.74	-1.3
1,930,343	-		OKGIIK_08970	0.74	-0.8
1,930,343	-		OKGIIK_08970	0.74	-0.6
1,930,693	+				-1.4
1,930,694	-				-1.3
1,930,741	+				-0.6
1,930,741	+				-2.1
1,930,742	-				+0.7
1,930,742	-				+0.4
1,930,742	-				-0.5
1,930,742	-				-0.4
1,930,742	-				+0.2
1,930,742	-				+0.0
1,930,742	-				-0.8
1,930,742	-				+0.2
1,930,742	-				+0.8
1,930,742	-				-0.2
1,930,742	-				+0.1
1,930,744	-				+0.4
1,930,744	-				-1.6
1,930,744	-				+1.3
1,930,744	-				-0.3
1,930,744	-				-0.2
1,930,744	-				+0.3
1,930,744	-				+0.2
1,930,744	-				+1.1
1,930,744	-				+1.3
1,930,744	-				+1.0
1,930,744	-				-1.3
1,930,744	-				+1.6
1,930,744	-				+2.0
1,930,744	-				+0.1
1,930,744	-				-0.3
1,930,744	-				+2.0
1,930,744	-				-1.3
1,930,744	-				-0.3
1,930,744	-				+0.7
1,930,744	-				-0.0
1,930,744	-				+0.4
1,930,744	-				-0.6
1,930,744	-				+0.2
1,930,744	-				+0.5
1,930,744	-				+1.0
1,930,744	-				+0.1
1,930,744	-				-1.1
1,930,744	-				-1.0
1,930,744	-				+0.9
1,930,744	-				-0.7
1,930,744	-				+0.0
1,930,744	-				-0.6
1,930,744	-				+0.1
1,930,744	-				+0.1
1,930,744	-				+1.0
1,931,091	+		OKGIIK_08975	0.34	-1.0
1,931,091	+		OKGIIK_08975	0.34	-0.4
1,931,091	+		OKGIIK_08975	0.34	+0.4
1,931,091	+		OKGIIK_08975	0.34	-0.6
1,931,091	+		OKGIIK_08975	0.34	-1.3
1,931,091	+		OKGIIK_08975	0.34	+1.8
1,931,091	+		OKGIIK_08975	0.34	-0.9
1,931,091	+		OKGIIK_08975	0.34	-0.6
1,931,092	-		OKGIIK_08975	0.35	-1.0
1,931,092	-		OKGIIK_08975	0.35	-0.4
1,931,092	-		OKGIIK_08975	0.35	+0.7
1,931,092	-		OKGIIK_08975	0.35	+0.4
1,931,092	-		OKGIIK_08975	0.35	-3.0
1,931,092	-		OKGIIK_08975	0.35	-0.1
1,931,232	+		OKGIIK_08975	0.88	-0.0
1,931,232	+		OKGIIK_08975	0.88	+0.6
1,931,232	+		OKGIIK_08975	0.88	-0.1
1,931,232	+		OKGIIK_08975	0.88	+0.2
1,931,232	+		OKGIIK_08975	0.88	+0.0
1,931,232	+		OKGIIK_08975	0.88	+0.7
1,931,232	+		OKGIIK_08975	0.88	+1.3
1,931,232	+		OKGIIK_08975	0.88	-2.1
1,931,232	+		OKGIIK_08975	0.88	-1.1
1,931,232	+		OKGIIK_08975	0.88	+1.0
1,931,232	+		OKGIIK_08975	0.88	+0.4
1,931,232	+		OKGIIK_08975	0.88	-1.8
1,931,233	-		OKGIIK_08975	0.88	+0.6
1,931,233	-		OKGIIK_08975	0.88	-0.1
1,931,233	-		OKGIIK_08975	0.88	+0.0
1,931,233	-		OKGIIK_08975	0.88	+0.0
1,931,233	-		OKGIIK_08975	0.88	+1.5
1,931,233	-		OKGIIK_08975	0.88	-0.2
1,931,233	-		OKGIIK_08975	0.88	-0.8
1,931,233	-		OKGIIK_08975	0.88	+0.0
1,931,306	+				-0.8
1,931,306	+				-0.2
1,931,307	-				+0.0
1,931,372	+				+1.5
1,931,373	-				-1.6
1,931,373	-				+1.2
1,931,480	+				-0.2
1,931,480	+				-0.3
1,931,480	+				+0.1
1,931,480	+				+0.2
1,931,480	+				+0.3
1,931,480	+				-0.8
1,931,480	+				-1.3
1,931,480	+				-0.8
1,931,480	+				+0.3
1,931,480	+				-0.9
1,931,481	-				-0.3
1,931,481	-				-1.1
1,931,481	-				-0.8
1,931,481	-				-0.3
1,931,481	-				+0.1
1,931,481	-				+1.6
1,931,481	-				-0.1
1,931,481	-				+1.0
1,931,481	-				+0.2
1,931,481	-				+0.5
1,931,481	-				-0.7
1,931,481	-				+0.3
1,931,481	-				+0.8
1,931,481	-				-0.9
1,931,481	-				-1.3
1,931,481	-				+1.4
1,931,481	-				+0.0
1,931,481	-				+0.2
1,931,481	-				+0.3
1,931,481	-				-0.3
1,931,481	-				-0.3
1,931,481	-				-0.1
1,931,534	+		OKGIIK_08980	0.12	-1.4
1,931,534	+		OKGIIK_08980	0.12	-0.7
1,931,535	-		OKGIIK_08980	0.12	-2.1
1,931,535	-		OKGIIK_08980	0.12	-0.5
1,931,535	-		OKGIIK_08980	0.12	+0.7
1,931,535	-		OKGIIK_08980	0.12	-0.4
1,931,535	-		OKGIIK_08980	0.12	-1.0
1,931,585	+		OKGIIK_08980	0.14	+0.2