Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_08545

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
1,869,571	+	emrB	OKGIIK_08535	0.85	+0.7
1,869,571	+	emrB	OKGIIK_08535	0.85	+0.0
1,869,571	+	emrB	OKGIIK_08535	0.85	+1.3
1,869,571	+	emrB	OKGIIK_08535	0.85	+1.0
1,869,571	+	emrB	OKGIIK_08535	0.85	-0.9
1,869,571	+	emrB	OKGIIK_08535	0.85	+0.7
1,869,572	-	emrB	OKGIIK_08535	0.85	-0.6
1,869,572	-	emrB	OKGIIK_08535	0.85	-0.3
1,869,861	+				-1.6
1,869,861	+				+1.8
1,869,862	-				-0.8
1,869,862	-				+0.0
1,869,862	-				-0.1
1,869,862	-				-0.1
1,869,914	+				+2.2
1,869,914	+				+1.4
1,869,914	+				-0.4
1,869,914	+				-0.3
1,869,915	-				-0.4
1,869,915	-				+0.0
1,869,915	-				-0.7
1,869,932	+				-1.6
1,869,932	+				+0.0
1,869,932	+				+1.2
1,869,953	+	phaR	OKGIIK_08540	0.14	-1.8
1,869,953	+	phaR	OKGIIK_08540	0.14	-0.3
1,869,953	+	phaR	OKGIIK_08540	0.14	-1.0
1,869,953	+	phaR	OKGIIK_08540	0.14	+0.0
1,869,953	+	phaR	OKGIIK_08540	0.14	+0.0
1,869,953	+	phaR	OKGIIK_08540	0.14	-0.3
1,869,953	+	phaR	OKGIIK_08540	0.14	-0.3
1,869,953	+	phaR	OKGIIK_08540	0.14	+1.3
1,869,953	+	phaR	OKGIIK_08540	0.14	-0.3
1,869,953	+	phaR	OKGIIK_08540	0.14	+1.1
1,869,953	+	phaR	OKGIIK_08540	0.14	-1.0
1,869,953	+	phaR	OKGIIK_08540	0.14	+0.4
1,869,953	+	phaR	OKGIIK_08540	0.14	+0.2
1,869,953	+	phaR	OKGIIK_08540	0.14	-1.2
1,869,953	+	phaR	OKGIIK_08540	0.14	+0.3
1,869,953	+	phaR	OKGIIK_08540	0.14	-2.2
1,869,954	-	phaR	OKGIIK_08540	0.14	-1.3
1,869,954	-	phaR	OKGIIK_08540	0.14	+0.4
1,869,954	-	phaR	OKGIIK_08540	0.14	+1.1
1,869,954	-	phaR	OKGIIK_08540	0.14	+1.5
1,869,954	-	phaR	OKGIIK_08540	0.14	+0.1
1,869,954	-	phaR	OKGIIK_08540	0.14	-1.0
1,869,954	-	phaR	OKGIIK_08540	0.14	+0.1
1,869,954	-	phaR	OKGIIK_08540	0.14	+0.1
1,869,954	-	phaR	OKGIIK_08540	0.14	+0.4
1,869,954	-	phaR	OKGIIK_08540	0.14	-0.3
1,869,954	-	phaR	OKGIIK_08540	0.14	-0.6
1,869,954	-	phaR	OKGIIK_08540	0.14	+1.0
1,869,954	-	phaR	OKGIIK_08540	0.14	+0.2
1,869,954	-	phaR	OKGIIK_08540	0.14	+1.3
1,869,954	-	phaR	OKGIIK_08540	0.14	+2.0
1,869,954	-	phaR	OKGIIK_08540	0.14	+1.6
1,870,130	+	phaR	OKGIIK_08540	0.49	-0.9
1,870,130	+	phaR	OKGIIK_08540	0.49	+0.4
1,870,130	+	phaR	OKGIIK_08540	0.49	-1.2
1,870,131	-	phaR	OKGIIK_08540	0.50	-1.0
1,870,163	+	phaR	OKGIIK_08540	0.56	-1.8
1,870,163	+	phaR	OKGIIK_08540	0.56	-1.0
1,870,163	+	phaR	OKGIIK_08540	0.56	-1.3
1,870,163	+	phaR	OKGIIK_08540	0.56	-1.9
1,870,164	-	phaR	OKGIIK_08540	0.56	+0.0
1,870,164	-	phaR	OKGIIK_08540	0.56	+0.3
1,870,164	-	phaR	OKGIIK_08540	0.56	+2.6
1,870,164	-	phaR	OKGIIK_08540	0.56	+0.9
1,870,164	-	phaR	OKGIIK_08540	0.56	-1.9
1,870,456	+				-1.0
1,870,456	+				+1.0
1,870,456	+				-0.4
1,870,456	+				-1.0
1,870,456	+				+1.2
1,870,456	+				+1.4
1,870,456	+				+0.0
1,870,456	+				-0.3
1,870,456	+				+0.4
1,870,456	+				+0.3
1,870,456	+				-1.4
1,870,456	+				+1.0
1,870,456	+				+0.3
1,870,456	+				+0.3
1,870,456	+				-0.7
1,870,456	+				-3.2
1,870,456	+				-0.6
1,870,456	+				+0.2
1,870,456	+				-0.3
1,870,456	+				-1.2
1,870,456	+				-2.0
1,870,456	+				+0.1
1,870,456	+				-0.1
1,870,456	+				-0.2
1,870,456	+				-0.9
1,870,456	+				-0.3
1,870,456	+				-1.9
1,870,456	+				+0.8
1,870,456	+				-1.2
1,870,456	+				-0.3
1,870,456	+				-1.1
1,870,456	+				+0.4
1,870,456	+				-1.0
1,870,456	+				-1.8
1,870,456	+				-1.2
1,870,456	+				+0.4
1,870,456	+				-0.2
1,870,456	+				+1.2
1,870,456	+				-0.8
1,870,456	+				+1.2
1,870,456	+				+0.0
1,870,456	+				-0.3
1,870,456	+				-1.2
1,870,456	+				+0.2
1,870,456	+				+1.2
1,870,456	+				+0.0
1,870,456	+				+0.4
1,870,456	+				-1.9
1,870,456	+				+2.0
1,870,456	+				-1.6
1,870,457	-				+0.6
1,870,457	-				+0.1
1,870,457	-				-0.6
1,870,457	-				+0.4
1,870,457	-				+0.2
1,870,457	-				-1.3
1,870,457	-				-0.1
1,870,457	-				-1.8
1,870,457	-				-0.2
1,870,457	-				-0.3
1,870,457	-				-0.3
1,870,457	-				-1.6
1,870,457	-				+0.3
1,870,457	-				-0.7
1,870,457	-				+1.3
1,870,457	-				+0.5
1,870,457	-				-0.6
1,870,457	-				-0.8
1,870,457	-				+0.6
1,870,457	-				-1.1
1,870,457	-				+0.3
1,870,457	-				+1.0
1,870,457	-				-0.4
1,870,457	-				+1.3
1,870,457	-				+0.6
1,870,457	-				+1.0
1,870,457	-				-1.6
1,870,457	-				-0.3
1,870,457	-				+0.0
1,870,457	-				-0.8
1,870,457	-				-1.2
1,870,457	-				-0.5
1,870,457	-				+0.3
1,870,457	-				-1.7
1,870,457	-				-0.3
1,870,457	-				+1.0
1,870,457	-				-1.2
1,870,970	+		OKGIIK_08545	0.63	-0.1
1,870,970	+		OKGIIK_08545	0.63	+0.4
1,870,970	+		OKGIIK_08545	0.63	+0.0
1,870,970	+		OKGIIK_08545	0.63	-0.2
1,870,970	+		OKGIIK_08545	0.63	-1.5
1,870,970	+		OKGIIK_08545	0.63	-0.5
1,870,970	+		OKGIIK_08545	0.63	+0.9
1,870,971	-		OKGIIK_08545	0.63	+1.0
1,870,971	-		OKGIIK_08545	0.63	+2.3
1,870,971	-		OKGIIK_08545	0.63	-0.2
1,870,971	-		OKGIIK_08545	0.63	-0.6
1,870,971	-		OKGIIK_08545	0.63	+1.7
1,870,971	-		OKGIIK_08545	0.63	+1.3
1,870,971	-		OKGIIK_08545	0.63	-0.8
1,870,971	-		OKGIIK_08545	0.63	+1.5
1,870,971	-		OKGIIK_08545	0.63	+0.0
1,870,971	-		OKGIIK_08545	0.63	+0.0
1,870,971	-		OKGIIK_08545	0.63	-2.4
1,870,971	-		OKGIIK_08545	0.63	-0.2
1,870,971	-		OKGIIK_08545	0.63	-1.9
1,871,066	+		OKGIIK_08545	0.75	-1.0
1,871,204	+				-1.1
1,871,204	+				+0.6
1,871,204	+				-1.1
1,871,205	-				+0.0
1,871,205	-				-0.3
1,871,205	-				-1.3
1,871,205	-				-0.4
1,871,241	-				-1.9
1,871,486	+		OKGIIK_08550	0.10	-0.1
1,871,487	-		OKGIIK_08550	0.10	+0.6
1,871,487	-		OKGIIK_08550	0.10	+1.7
1,871,951	+		OKGIIK_08550	0.42	+0.1
1,871,951	+		OKGIIK_08550	0.42	+1.0
1,871,951	+		OKGIIK_08550	0.42	+0.7
1,871,951	+		OKGIIK_08550	0.42	-3.0
1,871,952	-		OKGIIK_08550	0.42	+0.2
1,872,071	+		OKGIIK_08550	0.51	+0.8
1,872,071	+		OKGIIK_08550	0.51	-0.8
1,872,071	+		OKGIIK_08550	0.51	-0.1
1,872,071	+		OKGIIK_08550	0.51	-0.3
1,872,071	+		OKGIIK_08550	0.51	+0.0
1,872,071	+		OKGIIK_08550	0.51	+0.4
1,872,071	+		OKGIIK_08550	0.51	-1.9
1,872,072	-		OKGIIK_08550	0.51	-0.3
1,872,072	-		OKGIIK_08550	0.51	+0.6
1,872,072	-		OKGIIK_08550	0.51	+1.0
1,872,072	-		OKGIIK_08550	0.51	-2.1
1,872,072	-		OKGIIK_08550	0.51	+0.6
1,872,072	-		OKGIIK_08550	0.51	+0.2