Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_08240

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
1,811,371	+	rssA	OKGIIK_08230	0.80	-0.3
1,811,371	+	rssA	OKGIIK_08230	0.80	-0.3
1,811,372	-	rssA	OKGIIK_08230	0.81	+1.3
1,811,372	-	rssA	OKGIIK_08230	0.81	-1.9
1,811,372	-	rssA	OKGIIK_08230	0.81	+0.8
1,811,372	-	rssA	OKGIIK_08230	0.81	+0.0
1,811,372	-	rssA	OKGIIK_08230	0.81	+0.7
1,811,566	+				+0.4
1,811,566	+				+1.6
1,811,566	+				+0.3
1,811,567	-				-1.3
1,811,569	+				+0.2
1,811,569	+				+0.2
1,811,569	+				-0.0
1,811,570	-				+0.2
1,812,026	-		OKGIIK_08235	0.86	-1.4
1,812,026	-		OKGIIK_08235	0.86	-0.7
1,812,026	-		OKGIIK_08235	0.86	-1.3
1,812,026	-		OKGIIK_08235	0.86	-1.0
1,812,026	-		OKGIIK_08235	0.86	+2.2
1,812,026	-		OKGIIK_08235	0.86	+0.0
1,812,026	-		OKGIIK_08235	0.86	-0.8
1,812,067	+				+1.1
1,812,068	-				+0.2
1,812,068	-				+0.8
1,812,068	-				-1.3
1,812,199	+				-2.3
1,812,200	-				+0.8
1,812,253	+				-0.0
1,812,253	+				-0.4
1,812,253	+				+1.2
1,812,254	-				+0.4
1,812,254	-				-0.3
1,812,280	+				-1.0
1,812,280	+				+0.7
1,812,280	+				+0.2
1,812,280	+				+0.6
1,812,280	+				-1.9
1,812,280	+				-0.3
1,812,280	+				+1.4
1,812,280	+				+0.4
1,812,281	-				-1.7
1,812,281	-				-0.7
1,812,281	-				+0.3
1,812,281	-				-1.4
1,812,281	-				+1.0
1,812,281	-				+1.1
1,812,281	-				+0.9
1,812,580	+	aCH1	OKGIIK_08240	0.27	+1.0
1,812,581	-	aCH1	OKGIIK_08240	0.27	+1.2
1,812,581	-	aCH1	OKGIIK_08240	0.27	+0.4
1,812,581	-	aCH1	OKGIIK_08240	0.27	-1.1
1,812,581	-	aCH1	OKGIIK_08240	0.27	-0.8
1,812,685	+	aCH1	OKGIIK_08240	0.34	+0.3
1,812,685	+	aCH1	OKGIIK_08240	0.34	-1.1
1,812,685	+	aCH1	OKGIIK_08240	0.34	+0.2
1,812,686	-	aCH1	OKGIIK_08240	0.34	+0.2
1,812,686	-	aCH1	OKGIIK_08240	0.34	-0.9
1,812,686	-	aCH1	OKGIIK_08240	0.34	+1.2
1,812,686	-	aCH1	OKGIIK_08240	0.34	-0.4
1,812,855	+	aCH1	OKGIIK_08240	0.45	+0.2
1,813,060	+	aCH1	OKGIIK_08240	0.59	-2.0
1,813,060	+	aCH1	OKGIIK_08240	0.59	+0.0
1,813,060	+	aCH1	OKGIIK_08240	0.59	+0.0
1,813,075	-	aCH1	OKGIIK_08240	0.60	-0.5
1,813,132	+	aCH1	OKGIIK_08240	0.63	-0.9
1,813,132	+	aCH1	OKGIIK_08240	0.63	+0.6
1,813,132	+	aCH1	OKGIIK_08240	0.63	-0.1
1,813,132	+	aCH1	OKGIIK_08240	0.63	-1.1
1,813,133	-	aCH1	OKGIIK_08240	0.64	+1.3
1,813,133	-	aCH1	OKGIIK_08240	0.64	-2.2
1,813,133	-	aCH1	OKGIIK_08240	0.64	-0.8
1,813,135	+	aCH1	OKGIIK_08240	0.64	-0.3
1,813,135	+	aCH1	OKGIIK_08240	0.64	-0.2
1,813,135	+	aCH1	OKGIIK_08240	0.64	-0.3
1,813,135	+	aCH1	OKGIIK_08240	0.64	-1.0
1,813,135	+	aCH1	OKGIIK_08240	0.64	-0.1
1,813,135	+	aCH1	OKGIIK_08240	0.64	+1.2
1,813,135	+	aCH1	OKGIIK_08240	0.64	+1.2
1,813,135	+	aCH1	OKGIIK_08240	0.64	+0.7
1,813,135	+	aCH1	OKGIIK_08240	0.64	+0.2
1,813,135	+	aCH1	OKGIIK_08240	0.64	+0.4
1,813,135	+	aCH1	OKGIIK_08240	0.64	-1.1
1,813,135	+	aCH1	OKGIIK_08240	0.64	+0.3
1,813,135	+	aCH1	OKGIIK_08240	0.64	+0.8
1,813,135	+	aCH1	OKGIIK_08240	0.64	+0.0
1,813,135	+	aCH1	OKGIIK_08240	0.64	+0.2
1,813,135	+	aCH1	OKGIIK_08240	0.64	-1.1
1,813,135	+	aCH1	OKGIIK_08240	0.64	+1.8
1,813,135	+	aCH1	OKGIIK_08240	0.64	+2.4
1,813,136	-	aCH1	OKGIIK_08240	0.64	-0.5
1,813,136	-	aCH1	OKGIIK_08240	0.64	-0.8
1,813,136	-	aCH1	OKGIIK_08240	0.64	+0.8
1,813,136	-	aCH1	OKGIIK_08240	0.64	+1.7
1,813,136	-	aCH1	OKGIIK_08240	0.64	+1.7
1,813,136	-	aCH1	OKGIIK_08240	0.64	+0.0
1,813,136	-	aCH1	OKGIIK_08240	0.64	-2.2
1,813,136	-	aCH1	OKGIIK_08240	0.64	+0.8
1,813,136	-	aCH1	OKGIIK_08240	0.64	+1.7
1,813,136	-	aCH1	OKGIIK_08240	0.64	+1.0
1,813,136	-	aCH1	OKGIIK_08240	0.64	+0.0
1,813,136	-	aCH1	OKGIIK_08240	0.64	+0.0
1,813,136	-	aCH1	OKGIIK_08240	0.64	+0.4
1,813,136	-	aCH1	OKGIIK_08240	0.64	+0.6
1,813,136	-	aCH1	OKGIIK_08240	0.64	-0.9
1,813,136	-	aCH1	OKGIIK_08240	0.64	+0.3
1,813,136	-	aCH1	OKGIIK_08240	0.64	-1.6
1,813,136	-	aCH1	OKGIIK_08240	0.64	-0.3
1,813,242	-	aCH1	OKGIIK_08240	0.71	-1.7
1,813,324	+	aCH1	OKGIIK_08240	0.76	+0.3
1,813,324	+	aCH1	OKGIIK_08240	0.76	-1.9
1,813,324	+	aCH1	OKGIIK_08240	0.76	+1.0
1,813,324	+	aCH1	OKGIIK_08240	0.76	+0.7
1,813,325	-	aCH1	OKGIIK_08240	0.76	-0.3
1,813,325	-	aCH1	OKGIIK_08240	0.76	-1.3
1,813,325	-	aCH1	OKGIIK_08240	0.76	-1.3
1,813,325	-	aCH1	OKGIIK_08240	0.76	-1.4
1,813,325	-	aCH1	OKGIIK_08240	0.76	+0.4
1,813,332	+	aCH1	OKGIIK_08240	0.77	+1.8
1,813,332	+	aCH1	OKGIIK_08240	0.77	-0.1
1,813,333	-	aCH1	OKGIIK_08240	0.77	+0.2
1,813,333	-	aCH1	OKGIIK_08240	0.77	-1.4
1,813,333	-	aCH1	OKGIIK_08240	0.77	+0.4
1,813,333	-	aCH1	OKGIIK_08240	0.77	-0.3
1,813,357	+	aCH1	OKGIIK_08240	0.78	+2.0
1,813,357	+	aCH1	OKGIIK_08240	0.78	-0.3
1,813,357	+	aCH1	OKGIIK_08240	0.78	+1.0
1,813,357	+	aCH1	OKGIIK_08240	0.78	-1.1
1,813,357	+	aCH1	OKGIIK_08240	0.78	-2.2
1,813,357	+	aCH1	OKGIIK_08240	0.78	-1.3
1,813,357	+	aCH1	OKGIIK_08240	0.78	+0.4
1,813,357	+	aCH1	OKGIIK_08240	0.78	-1.7
1,813,357	+	aCH1	OKGIIK_08240	0.78	+1.2
1,813,358	-	aCH1	OKGIIK_08240	0.78	-0.7
1,813,358	-	aCH1	OKGIIK_08240	0.78	+1.9
1,813,358	-	aCH1	OKGIIK_08240	0.78	-0.5
1,813,358	-	aCH1	OKGIIK_08240	0.78	-1.0
1,813,358	-	aCH1	OKGIIK_08240	0.78	-2.0
1,813,358	-	aCH1	OKGIIK_08240	0.78	-0.0
1,813,358	-	aCH1	OKGIIK_08240	0.78	-1.0
1,813,358	-	aCH1	OKGIIK_08240	0.78	-0.1
1,813,358	-	aCH1	OKGIIK_08240	0.78	+0.7
1,813,358	-	aCH1	OKGIIK_08240	0.78	+0.9
1,813,408	+	aCH1	OKGIIK_08240	0.82	-2.0
1,813,679	-				-2.1
1,813,920	+				-1.7
1,813,920	+				+1.1
1,813,921	-				+1.8
1,813,921	-				+0.7
1,814,143	+		OKGIIK_08245	0.10	+1.4
1,814,143	+		OKGIIK_08245	0.10	+1.2
1,814,144	-		OKGIIK_08245	0.11	-1.0
1,814,185	+		OKGIIK_08245	0.12	-0.8
1,814,185	+		OKGIIK_08245	0.12	+0.4
1,814,185	+		OKGIIK_08245	0.12	+2.0
1,814,185	+		OKGIIK_08245	0.12	+1.0
1,814,185	+		OKGIIK_08245	0.12	-0.6
1,814,185	+		OKGIIK_08245	0.12	+1.3
1,814,185	+		OKGIIK_08245	0.12	+0.6
1,814,185	+		OKGIIK_08245	0.12	+0.4
1,814,186	-		OKGIIK_08245	0.12	-0.2
1,814,186	-		OKGIIK_08245	0.12	-1.9
1,814,186	-		OKGIIK_08245	0.12	+0.7
1,814,186	-		OKGIIK_08245	0.12	-0.6
1,814,186	-		OKGIIK_08245	0.12	-0.8
1,814,186	-		OKGIIK_08245	0.12	+0.6
1,814,186	-		OKGIIK_08245	0.12	-0.1
1,814,186	-		OKGIIK_08245	0.12	-1.2
1,814,186	-		OKGIIK_08245	0.12	+0.0
1,814,186	-		OKGIIK_08245	0.12	+0.0
1,814,186	-		OKGIIK_08245	0.12	-1.1
1,814,290	+		OKGIIK_08245	0.17	+0.2
1,814,291	-		OKGIIK_08245	0.17	+1.7
1,814,291	-		OKGIIK_08245	0.17	-0.3
1,814,291	-		OKGIIK_08245	0.17	+0.0
1,814,291	-		OKGIIK_08245	0.17	-0.1
1,814,350	+		OKGIIK_08245	0.20	-0.3
1,814,350	+		OKGIIK_08245	0.20	+0.3
1,814,350	+		OKGIIK_08245	0.20	+0.1
1,814,350	+		OKGIIK_08245	0.20	-0.6
1,814,350	+		OKGIIK_08245	0.20	-1.2
1,814,350	+		OKGIIK_08245	0.20	-0.3
1,814,350	+		OKGIIK_08245	0.20	+0.0
1,814,350	+		OKGIIK_08245	0.20	-0.1
1,814,350	+		OKGIIK_08245	0.20	-0.6
1,814,350	+		OKGIIK_08245	0.20	+1.2
1,814,351	-		OKGIIK_08245	0.20	-1.0
1,814,351	-		OKGIIK_08245	0.20	+0.1
1,814,351	-		OKGIIK_08245	0.20	-1.3
1,814,351	-		OKGIIK_08245	0.20	+1.1
1,814,351	-		OKGIIK_08245	0.20	-0.1
1,814,351	-		OKGIIK_08245	0.20	-0.7
1,814,351	-		OKGIIK_08245	0.20	-0.7
1,814,351	-		OKGIIK_08245	0.20	+0.0
1,814,351	-		OKGIIK_08245	0.20	-2.3
1,814,351	-		OKGIIK_08245	0.20	+0.0
1,814,351	-		OKGIIK_08245	0.20	+0.0
1,814,351	-		OKGIIK_08245	0.20	+1.0
1,814,351	-		OKGIIK_08245	0.20	-1.2
1,814,351	-		OKGIIK_08245	0.20	+0.8
1,814,353	+		OKGIIK_08245	0.20	-1.0
1,814,353	+		OKGIIK_08245	0.20	+1.0
1,814,353	+		OKGIIK_08245	0.20	-1.8
1,814,354	-		OKGIIK_08245	0.20	+0.8
1,814,354	-		OKGIIK_08245	0.20	-1.8
1,814,354	-		OKGIIK_08245	0.20	-1.1
1,814,354	-		OKGIIK_08245	0.20	-0.1
1,814,354	-		OKGIIK_08245	0.20	+0.4
1,814,485	+		OKGIIK_08245	0.26	-0.4
1,814,520	+		OKGIIK_08245	0.27	-0.8
1,814,677	+		OKGIIK_08245	0.34	+0.6
1,814,677	+		OKGIIK_08245	0.34	+0.6
1,814,677	+		OKGIIK_08245	0.34	-0.9