Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_07590

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
1,677,569	+	hyfB	OKGIIK_07585	0.68	+0.5
1,677,569	+	hyfB	OKGIIK_07585	0.68	+0.8
1,677,569	+	hyfB	OKGIIK_07585	0.68	-0.3
1,677,569	+	hyfB	OKGIIK_07585	0.68	-1.3
1,677,569	+	hyfB	OKGIIK_07585	0.68	-1.3
1,677,570	-	hyfB	OKGIIK_07585	0.68	-2.3
1,677,570	-	hyfB	OKGIIK_07585	0.68	+0.4
1,677,570	-	hyfB	OKGIIK_07585	0.68	-0.9
1,677,570	-	hyfB	OKGIIK_07585	0.68	-2.4
1,677,579	+	hyfB	OKGIIK_07585	0.69	-0.5
1,677,579	+	hyfB	OKGIIK_07585	0.69	+0.6
1,677,579	+	hyfB	OKGIIK_07585	0.69	-0.5
1,677,579	+	hyfB	OKGIIK_07585	0.69	-1.1
1,677,579	+	hyfB	OKGIIK_07585	0.69	-1.6
1,677,579	+	hyfB	OKGIIK_07585	0.69	-0.3
1,677,579	+	hyfB	OKGIIK_07585	0.69	-1.5
1,677,580	-	hyfB	OKGIIK_07585	0.69	-0.8
1,677,580	-	hyfB	OKGIIK_07585	0.69	+0.3
1,677,580	-	hyfB	OKGIIK_07585	0.69	+1.5
1,677,580	-	hyfB	OKGIIK_07585	0.69	+0.7
1,677,580	-	hyfB	OKGIIK_07585	0.69	+0.5
1,677,580	-	hyfB	OKGIIK_07585	0.69	+0.6
1,677,580	-	hyfB	OKGIIK_07585	0.69	-0.1
1,677,585	+	hyfB	OKGIIK_07585	0.69	-1.9
1,677,806	+	hyfB	OKGIIK_07585	0.80	+0.1
1,677,806	+	hyfB	OKGIIK_07585	0.80	+0.2
1,677,806	+	hyfB	OKGIIK_07585	0.80	-0.8
1,677,806	+	hyfB	OKGIIK_07585	0.80	-0.9
1,677,806	+	hyfB	OKGIIK_07585	0.80	+0.5
1,677,806	+	hyfB	OKGIIK_07585	0.80	+0.0
1,677,806	+	hyfB	OKGIIK_07585	0.80	-0.9
1,677,806	+	hyfB	OKGIIK_07585	0.80	+0.3
1,677,806	+	hyfB	OKGIIK_07585	0.80	+0.1
1,677,806	+	hyfB	OKGIIK_07585	0.80	-1.2
1,677,806	+	hyfB	OKGIIK_07585	0.80	+1.3
1,677,806	+	hyfB	OKGIIK_07585	0.80	+0.1
1,677,806	+	hyfB	OKGIIK_07585	0.80	-2.1
1,677,806	+	hyfB	OKGIIK_07585	0.80	-0.8
1,677,806	+	hyfB	OKGIIK_07585	0.80	+0.1
1,677,806	+	hyfB	OKGIIK_07585	0.80	+0.6
1,677,806	+	hyfB	OKGIIK_07585	0.80	-0.3
1,677,806	+	hyfB	OKGIIK_07585	0.80	-0.8
1,677,807	-	hyfB	OKGIIK_07585	0.80	+0.2
1,677,807	-	hyfB	OKGIIK_07585	0.80	-0.3
1,677,807	-	hyfB	OKGIIK_07585	0.80	+1.4
1,677,807	-	hyfB	OKGIIK_07585	0.80	+0.8
1,677,807	-	hyfB	OKGIIK_07585	0.80	-1.3
1,677,807	-	hyfB	OKGIIK_07585	0.80	-1.3
1,677,807	-	hyfB	OKGIIK_07585	0.80	+0.2
1,677,807	-	hyfB	OKGIIK_07585	0.80	-0.1
1,677,867	+	hyfB	OKGIIK_07585	0.83	-1.9
1,677,867	+	hyfB	OKGIIK_07585	0.83	-0.1
1,677,878	+	hyfB	OKGIIK_07585	0.83	-2.1
1,677,878	+	hyfB	OKGIIK_07585	0.83	+0.7
1,677,878	+	hyfB	OKGIIK_07585	0.83	-0.8
1,677,878	+	hyfB	OKGIIK_07585	0.83	-1.4
1,677,878	+	hyfB	OKGIIK_07585	0.83	-0.3
1,677,878	+	hyfB	OKGIIK_07585	0.83	-1.6
1,677,878	+	hyfB	OKGIIK_07585	0.83	-0.1
1,677,879	-	hyfB	OKGIIK_07585	0.83	+0.5
1,677,879	-	hyfB	OKGIIK_07585	0.83	+0.1
1,677,879	-	hyfB	OKGIIK_07585	0.83	+0.2
1,677,879	-	hyfB	OKGIIK_07585	0.83	-0.3
1,677,879	-	hyfB	OKGIIK_07585	0.83	+0.2
1,678,085	+				-1.3
1,678,086	-				-1.1
1,678,086	-				+1.5
1,678,086	-				-0.3
1,678,160	+				-1.8
1,678,160	+				-0.6
1,678,160	+				-1.0
1,678,160	+				-0.2
1,678,160	+				+0.6
1,678,160	+				-0.4
1,678,161	-				+0.8
1,678,161	-				+0.8
1,678,161	-				+1.7
1,678,161	-				+0.1
1,678,161	-				-0.9
1,678,161	-				-0.5
1,678,161	-				+1.5
1,678,161	-				-1.3
1,678,161	-				-2.6
1,678,161	-				+2.7
1,678,169	+				+0.4
1,678,169	+				+1.2
1,678,170	-				+0.2
1,678,170	-				+0.3
1,678,191	+				-1.1
1,678,191	+				-0.5
1,678,191	+				-0.5
1,678,192	-				+0.7
1,678,192	-				+0.3
1,678,192	-				-1.0
1,678,250	+				+0.4
1,678,251	-				+0.4
1,678,251	-				-0.9
1,678,290	-				+0.1
1,678,345	+	hyfC	OKGIIK_07590	0.14	+0.1
1,678,345	+	hyfC	OKGIIK_07590	0.14	+0.3
1,678,424	-	hyfC	OKGIIK_07590	0.22	-0.9
1,678,424	-	hyfC	OKGIIK_07590	0.22	-0.4
1,678,921	+	hyfC	OKGIIK_07590	0.75	-0.9
1,678,921	+	hyfC	OKGIIK_07590	0.75	+0.2
1,678,921	+	hyfC	OKGIIK_07590	0.75	-0.5
1,678,921	+	hyfC	OKGIIK_07590	0.75	-0.2
1,678,921	+	hyfC	OKGIIK_07590	0.75	-0.5
1,678,921	+	hyfC	OKGIIK_07590	0.75	+1.1
1,678,921	+	hyfC	OKGIIK_07590	0.75	-0.0
1,678,921	+	hyfC	OKGIIK_07590	0.75	+1.5
1,678,921	+	hyfC	OKGIIK_07590	0.75	-0.5
1,678,921	+	hyfC	OKGIIK_07590	0.75	+1.4
1,678,921	+	hyfC	OKGIIK_07590	0.75	-0.0
1,678,921	+	hyfC	OKGIIK_07590	0.75	+1.6
1,678,922	-	hyfC	OKGIIK_07590	0.75	+0.1
1,678,922	-	hyfC	OKGIIK_07590	0.75	-0.3
1,678,922	-	hyfC	OKGIIK_07590	0.75	-0.3
1,678,922	-	hyfC	OKGIIK_07590	0.75	-0.5
1,679,147	+				-2.3
1,679,147	+				-1.8
1,679,147	+				-0.8
1,679,147	+				-1.3
1,679,148	-				+0.2
1,679,148	-				+0.2
1,679,148	-				-0.1
1,679,148	-				-0.3
1,679,148	-				-0.5
1,679,148	-				-0.9
1,679,148	-				+0.1
1,679,148	-				+1.3
1,679,148	-				+0.9
1,679,148	-				-0.3
1,679,350	+	hyfE	OKGIIK_07595	0.28	-1.8
1,679,350	+	hyfE	OKGIIK_07595	0.28	-0.9
1,679,350	+	hyfE	OKGIIK_07595	0.28	+0.1
1,679,350	+	hyfE	OKGIIK_07595	0.28	+0.4
1,679,350	+	hyfE	OKGIIK_07595	0.28	-2.3
1,679,351	-	hyfE	OKGIIK_07595	0.28	-0.1
1,679,351	-	hyfE	OKGIIK_07595	0.28	+1.3
1,679,351	-	hyfE	OKGIIK_07595	0.28	-1.3
1,679,351	-	hyfE	OKGIIK_07595	0.28	+0.7
1,679,351	-	hyfE	OKGIIK_07595	0.28	+0.1
1,679,351	-	hyfE	OKGIIK_07595	0.28	-1.6
1,679,351	-	hyfE	OKGIIK_07595	0.28	-1.9
1,679,353	+	hyfE	OKGIIK_07595	0.28	+0.2
1,679,353	+	hyfE	OKGIIK_07595	0.28	-0.8
1,679,353	+	hyfE	OKGIIK_07595	0.28	-0.9
1,679,354	-	hyfE	OKGIIK_07595	0.28	+1.1
1,679,354	-	hyfE	OKGIIK_07595	0.28	-0.5
1,679,354	-	hyfE	OKGIIK_07595	0.28	-0.9
1,679,689	+	hyfE	OKGIIK_07595	0.78	-1.2
1,679,690	-	hyfE	OKGIIK_07595	0.79	+0.7
1,679,857	+				-0.8
1,679,967	+				-0.1
1,679,968	-				+0.5
1,680,095	+	hyfB	OKGIIK_07600	0.18	+2.1
1,680,095	+	hyfB	OKGIIK_07600	0.18	+0.7
1,680,095	+	hyfB	OKGIIK_07600	0.18	-1.0
1,680,095	+	hyfB	OKGIIK_07600	0.18	-0.0
1,680,095	+	hyfB	OKGIIK_07600	0.18	-0.8
1,680,095	+	hyfB	OKGIIK_07600	0.18	+0.8
1,680,096	-	hyfB	OKGIIK_07600	0.18	-0.0
1,680,096	-	hyfB	OKGIIK_07600	0.18	-0.2
1,680,096	-	hyfB	OKGIIK_07600	0.18	+1.1
1,680,096	-	hyfB	OKGIIK_07600	0.18	+0.7
1,680,103	+	hyfB	OKGIIK_07600	0.19	+0.5
1,680,104	-	hyfB	OKGIIK_07600	0.19	+0.2
1,680,150	-	hyfB	OKGIIK_07600	0.22	+0.6
1,680,161	+	hyfB	OKGIIK_07600	0.23	+0.3
1,680,161	+	hyfB	OKGIIK_07600	0.23	+0.1
1,680,161	+	hyfB	OKGIIK_07600	0.23	-0.2
1,680,161	+	hyfB	OKGIIK_07600	0.23	-0.3
1,680,161	+	hyfB	OKGIIK_07600	0.23	-0.9
1,680,161	+	hyfB	OKGIIK_07600	0.23	-0.4
1,680,161	+	hyfB	OKGIIK_07600	0.23	-0.5
1,680,161	+	hyfB	OKGIIK_07600	0.23	-0.3
1,680,161	+	hyfB	OKGIIK_07600	0.23	+0.7
1,680,161	+	hyfB	OKGIIK_07600	0.23	-0.3
1,680,161	+	hyfB	OKGIIK_07600	0.23	-1.1
1,680,161	+	hyfB	OKGIIK_07600	0.23	+1.5
1,680,161	+	hyfB	OKGIIK_07600	0.23	-0.9
1,680,161	+	hyfB	OKGIIK_07600	0.23	+0.2
1,680,162	-	hyfB	OKGIIK_07600	0.23	+0.5
1,680,162	-	hyfB	OKGIIK_07600	0.23	+1.4
1,680,162	-	hyfB	OKGIIK_07600	0.23	-0.5
1,680,162	-	hyfB	OKGIIK_07600	0.23	-1.2
1,680,162	-	hyfB	OKGIIK_07600	0.23	-0.3
1,680,162	-	hyfB	OKGIIK_07600	0.23	+1.3
1,680,162	-	hyfB	OKGIIK_07600	0.23	-1.1
1,680,162	-	hyfB	OKGIIK_07600	0.23	-1.1
1,680,162	-	hyfB	OKGIIK_07600	0.23	-0.3
1,680,162	-	hyfB	OKGIIK_07600	0.23	-0.3