Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_07245

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
1,601,653	-	flaA1	OKGIIK_07240	0.49	+1.1
1,601,661	+	flaA1	OKGIIK_07240	0.49	-1.4
1,601,661	+	flaA1	OKGIIK_07240	0.49	-1.2
1,601,661	+	flaA1	OKGIIK_07240	0.49	+0.1
1,601,661	+	flaA1	OKGIIK_07240	0.49	-0.5
1,601,661	+	flaA1	OKGIIK_07240	0.49	-1.1
1,601,661	+	flaA1	OKGIIK_07240	0.49	-2.9
1,601,661	+	flaA1	OKGIIK_07240	0.49	-0.5
1,601,662	-	flaA1	OKGIIK_07240	0.50	-0.5
1,601,662	-	flaA1	OKGIIK_07240	0.50	+0.3
1,601,662	-	flaA1	OKGIIK_07240	0.50	-0.6
1,601,780	-	flaA1	OKGIIK_07240	0.56	-1.4
1,601,902	+	flaA1	OKGIIK_07240	0.62	+1.4
1,601,903	-	flaA1	OKGIIK_07240	0.62	-0.5
1,601,924	-	flaA1	OKGIIK_07240	0.63	-1.7
1,602,108	+	flaA1	OKGIIK_07240	0.73	+0.1
1,602,109	-	flaA1	OKGIIK_07240	0.73	+0.1
1,602,226	-	flaA1	OKGIIK_07240	0.79	-1.1
1,602,226	-	flaA1	OKGIIK_07240	0.79	-0.9
1,602,226	-	flaA1	OKGIIK_07240	0.79	-1.1
1,602,231	+	flaA1	OKGIIK_07240	0.80	+0.1
1,602,231	+	flaA1	OKGIIK_07240	0.80	-1.2
1,602,232	-	flaA1	OKGIIK_07240	0.80	-0.4
1,602,318	+	flaA1	OKGIIK_07240	0.84	-1.7
1,602,318	+	flaA1	OKGIIK_07240	0.84	+0.7
1,602,318	+	flaA1	OKGIIK_07240	0.84	-1.4
1,602,318	+	flaA1	OKGIIK_07240	0.84	-2.1
1,602,319	-	flaA1	OKGIIK_07240	0.84	-1.4
1,602,319	-	flaA1	OKGIIK_07240	0.84	-0.7
1,602,319	-	flaA1	OKGIIK_07240	0.84	-0.6
1,602,319	-	flaA1	OKGIIK_07240	0.84	-0.2
1,602,319	-	flaA1	OKGIIK_07240	0.84	+0.1
1,602,319	-	flaA1	OKGIIK_07240	0.84	-1.1
1,602,319	-	flaA1	OKGIIK_07240	0.84	-0.9
1,602,349	+	flaA1	OKGIIK_07240	0.86	+1.5
1,602,350	-	flaA1	OKGIIK_07240	0.86	-1.1
1,602,417	+	flaA1	OKGIIK_07240	0.89	-0.6
1,602,417	+	flaA1	OKGIIK_07240	0.89	-1.1
1,602,418	-	flaA1	OKGIIK_07240	0.89	-0.2
1,602,513	+				-0.1
1,602,513	+				-0.5
1,602,514	-				-0.4
1,602,607	+				+0.1
1,602,607	+				+1.1
1,602,607	+				+0.0
1,602,607	+				-0.1
1,602,607	+				-0.7
1,602,607	+				+0.1
1,602,608	-				-0.7
1,602,608	-				-0.7
1,602,608	-				-1.1
1,602,608	-				+0.4
1,602,608	-				-1.4
1,602,608	-				-0.5
1,602,691	+				-1.7
1,602,691	+				-1.4
1,602,691	+				+0.1
1,602,691	+				-1.1
1,602,691	+				-0.7
1,602,691	+				+0.1
1,602,692	-				-0.9
1,602,692	-				-1.4
1,602,692	-				+1.1
1,602,704	+				-1.0
1,602,704	+				-0.1
1,602,704	+				+1.0
1,602,704	+				-0.5
1,602,704	+				-0.7
1,602,705	-				-0.1
1,602,705	-				+0.7
1,602,781	+		OKGIIK_07245	0.17	-2.3
1,602,781	+		OKGIIK_07245	0.17	-0.3
1,602,781	+		OKGIIK_07245	0.17	-0.9
1,602,781	+		OKGIIK_07245	0.17	-0.2
1,602,781	+		OKGIIK_07245	0.17	-0.2
1,602,832	+		OKGIIK_07245	0.22	+1.1
1,602,832	+		OKGIIK_07245	0.22	-0.5
1,602,832	+		OKGIIK_07245	0.22	-0.2
1,602,832	+		OKGIIK_07245	0.22	-0.5
1,602,832	+		OKGIIK_07245	0.22	+0.1
1,602,832	+		OKGIIK_07245	0.22	-1.1
1,602,832	+		OKGIIK_07245	0.22	+3.4
1,602,833	-		OKGIIK_07245	0.22	-0.8
1,602,833	-		OKGIIK_07245	0.22	+1.7
1,602,833	-		OKGIIK_07245	0.22	-0.5
1,602,833	-		OKGIIK_07245	0.22	-0.2
1,602,856	+		OKGIIK_07245	0.24	-0.1
1,602,856	+		OKGIIK_07245	0.24	-1.4
1,602,857	-		OKGIIK_07245	0.25	+0.5
1,602,857	-		OKGIIK_07245	0.25	-2.4
1,602,857	-		OKGIIK_07245	0.25	+0.0
1,602,857	-		OKGIIK_07245	0.25	+1.1
1,602,857	-		OKGIIK_07245	0.25	+0.1
1,603,555	+				+0.5
1,603,555	+				+0.1
1,603,573	-				+0.1
1,603,573	-				-0.5
1,603,624	+				-1.4
1,603,624	+				-0.9
1,603,624	+				-0.9
1,603,624	+				-0.8
1,603,624	+				+0.1
1,603,624	+				-1.5
1,603,624	+				+0.1
1,603,624	+				-0.5
1,603,624	+				-0.2
1,603,624	+				-0.1
1,603,624	+				+0.1
1,603,624	+				-0.5
1,603,624	+				+0.1
1,603,624	+				+0.1
1,603,624	+				-1.4
1,603,624	+				-0.8
1,603,624	+				-1.5
1,603,624	+				+0.1
1,603,624	+				-1.0
1,603,624	+				-1.7
1,603,625	-				-0.2
1,603,625	-				+1.8
1,603,625	-				-0.7
1,603,625	-				-1.2
1,603,625	-				-0.5
1,603,625	-				-1.4
1,603,625	-				+0.1
1,603,625	-				+0.4
1,603,625	-				-0.2
1,603,625	-				-2.1
1,603,625	-				-1.0
1,603,625	-				+0.1
1,603,625	-				+1.7
1,603,625	-				-0.5
1,603,625	-				-0.2
1,603,625	-				-1.1
1,603,625	-				+0.3
1,603,742	+				+0.4
1,603,742	+				+0.8
1,603,743	-				+0.4
1,603,743	-				+0.5
1,603,743	-				+0.5
1,603,743	-				+0.1
1,603,743	-				-1.4
1,603,743	-				-0.7
1,603,743	-				-0.4
1,603,929	-	lapB	OKGIIK_07250	0.25	+0.1
1,604,027	+	lapB	OKGIIK_07250	0.33	-0.9
1,604,027	+	lapB	OKGIIK_07250	0.33	+2.1
1,604,027	+	lapB	OKGIIK_07250	0.33	-0.2
1,604,028	-	lapB	OKGIIK_07250	0.33	+1.1
1,604,028	-	lapB	OKGIIK_07250	0.33	+0.3
1,604,028	-	lapB	OKGIIK_07250	0.33	+0.1
1,604,028	-	lapB	OKGIIK_07250	0.33	+0.1
1,604,028	-	lapB	OKGIIK_07250	0.33	-0.2
1,604,094	-	lapB	OKGIIK_07250	0.39	+0.9
1,604,094	-	lapB	OKGIIK_07250	0.39	+0.5
1,604,161	+	lapB	OKGIIK_07250	0.45	+0.1
1,604,161	+	lapB	OKGIIK_07250	0.45	+0.2
1,604,161	+	lapB	OKGIIK_07250	0.45	+0.4
1,604,161	+	lapB	OKGIIK_07250	0.45	-0.5
1,604,161	+	lapB	OKGIIK_07250	0.45	-0.2
1,604,162	-	lapB	OKGIIK_07250	0.45	+0.4
1,604,162	-	lapB	OKGIIK_07250	0.45	-0.7
1,604,162	-	lapB	OKGIIK_07250	0.45	-0.2
1,604,162	-	lapB	OKGIIK_07250	0.45	+0.3
1,604,162	-	lapB	OKGIIK_07250	0.45	-0.9
1,604,162	-	lapB	OKGIIK_07250	0.45	+0.1
1,604,162	-	lapB	OKGIIK_07250	0.45	-1.5
1,604,162	-	lapB	OKGIIK_07250	0.45	+0.1
1,604,198	+	lapB	OKGIIK_07250	0.48	-2.1
1,604,199	-	lapB	OKGIIK_07250	0.48	+0.6
1,604,255	+	lapB	OKGIIK_07250	0.53	-0.2
1,604,255	+	lapB	OKGIIK_07250	0.53	-0.2
1,604,255	+	lapB	OKGIIK_07250	0.53	+0.5
1,604,256	-	lapB	OKGIIK_07250	0.53	-0.9
1,604,256	-	lapB	OKGIIK_07250	0.53	+2.7
1,604,256	-	lapB	OKGIIK_07250	0.53	-0.2
1,604,256	-	lapB	OKGIIK_07250	0.53	+1.8
1,604,352	-	lapB	OKGIIK_07250	0.61	-2.4
1,604,352	-	lapB	OKGIIK_07250	0.61	-0.2
1,604,352	-	lapB	OKGIIK_07250	0.61	+1.8
1,604,453	+	lapB	OKGIIK_07250	0.70	-0.2
1,604,453	+	lapB	OKGIIK_07250	0.70	-0.7
1,604,453	+	lapB	OKGIIK_07250	0.70	+0.1
1,604,453	+	lapB	OKGIIK_07250	0.70	-0.4
1,604,453	+	lapB	OKGIIK_07250	0.70	-0.8
1,604,453	+	lapB	OKGIIK_07250	0.70	-0.5
1,604,453	+	lapB	OKGIIK_07250	0.70	+0.3
1,604,453	+	lapB	OKGIIK_07250	0.70	+0.6
1,604,453	+	lapB	OKGIIK_07250	0.70	+2.7
1,604,453	+	lapB	OKGIIK_07250	0.70	+0.5
1,604,454	-	lapB	OKGIIK_07250	0.70	+1.7
1,604,454	-	lapB	OKGIIK_07250	0.70	-1.1
1,604,454	-	lapB	OKGIIK_07250	0.70	+0.1
1,604,454	-	lapB	OKGIIK_07250	0.70	-1.8
1,604,454	-	lapB	OKGIIK_07250	0.70	-1.6
1,604,454	-	lapB	OKGIIK_07250	0.70	-0.7
1,604,612	+	lapB	OKGIIK_07250	0.83	-0.5
1,604,612	+	lapB	OKGIIK_07250	0.83	+0.8
1,604,612	+	lapB	OKGIIK_07250	0.83	+0.1
1,604,612	+	lapB	OKGIIK_07250	0.83	+0.7
1,604,613	-	lapB	OKGIIK_07250	0.83	-1.1
1,604,613	-	lapB	OKGIIK_07250	0.83	-1.6
1,604,613	-	lapB	OKGIIK_07250	0.83	-0.5
1,604,613	-	lapB	OKGIIK_07250	0.83	+0.8