Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_05535

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
1,212,425	+		OKGIIK_05525	0.78	-0.0
1,212,425	+		OKGIIK_05525	0.78	+1.0
1,212,425	+		OKGIIK_05525	0.78	+0.6
1,212,425	+		OKGIIK_05525	0.78	-0.4
1,212,426	-		OKGIIK_05525	0.78	-0.9
1,212,426	-		OKGIIK_05525	0.78	-0.8
1,212,426	-		OKGIIK_05525	0.78	-0.3
1,212,444	+		OKGIIK_05525	0.80	+0.8
1,212,445	-		OKGIIK_05525	0.80	+0.0
1,212,445	-		OKGIIK_05525	0.80	+0.0
1,212,445	-		OKGIIK_05525	0.80	-0.8
1,212,445	-		OKGIIK_05525	0.80	-0.3
1,212,451	+		OKGIIK_05525	0.81	-0.3
1,212,451	+		OKGIIK_05525	0.81	-0.1
1,212,451	+		OKGIIK_05525	0.81	-0.1
1,212,451	+		OKGIIK_05525	0.81	-2.0
1,212,451	+		OKGIIK_05525	0.81	-0.4
1,212,451	+		OKGIIK_05525	0.81	-0.8
1,212,452	-		OKGIIK_05525	0.81	-1.0
1,212,452	-		OKGIIK_05525	0.81	+0.5
1,212,452	-		OKGIIK_05525	0.81	-0.7
1,212,452	-		OKGIIK_05525	0.81	+1.4
1,212,452	-		OKGIIK_05525	0.81	+0.6
1,212,452	-		OKGIIK_05525	0.81	-1.0
1,212,452	-		OKGIIK_05525	0.81	+1.0
1,212,452	-		OKGIIK_05525	0.81	+0.5
1,212,469	+		OKGIIK_05525	0.83	-0.0
1,212,469	+		OKGIIK_05525	0.83	+1.2
1,212,469	+		OKGIIK_05525	0.83	-0.3
1,212,469	+		OKGIIK_05525	0.83	-0.3
1,212,469	+		OKGIIK_05525	0.83	-1.7
1,212,469	+		OKGIIK_05525	0.83	-0.3
1,212,469	+		OKGIIK_05525	0.83	+0.0
1,212,469	+		OKGIIK_05525	0.83	-0.8
1,212,470	-		OKGIIK_05525	0.83	-1.0
1,212,470	-		OKGIIK_05525	0.83	-1.5
1,212,470	-		OKGIIK_05525	0.83	-1.7
1,212,470	-		OKGIIK_05525	0.83	+1.2
1,212,470	-		OKGIIK_05525	0.83	+1.0
1,212,470	-		OKGIIK_05525	0.83	+1.8
1,212,470	-		OKGIIK_05525	0.83	-0.3
1,212,470	-		OKGIIK_05525	0.83	-2.5
1,212,470	-		OKGIIK_05525	0.83	-0.5
1,212,470	-		OKGIIK_05525	0.83	-0.4
1,212,470	-		OKGIIK_05525	0.83	-0.0
1,212,470	-		OKGIIK_05525	0.83	-1.7
1,212,473	+		OKGIIK_05525	0.83	+1.0
1,212,473	+		OKGIIK_05525	0.83	-1.0
1,212,473	+		OKGIIK_05525	0.83	+0.7
1,212,473	+		OKGIIK_05525	0.83	+0.7
1,212,473	+		OKGIIK_05525	0.83	-1.5
1,212,473	+		OKGIIK_05525	0.83	-2.7
1,212,473	+		OKGIIK_05525	0.83	-1.4
1,212,473	+		OKGIIK_05525	0.83	-1.3
1,212,473	+		OKGIIK_05525	0.83	+1.0
1,212,473	+		OKGIIK_05525	0.83	+2.0
1,212,474	-		OKGIIK_05525	0.83	+0.0
1,212,474	-		OKGIIK_05525	0.83	+0.6
1,212,474	-		OKGIIK_05525	0.83	+0.5
1,212,474	-		OKGIIK_05525	0.83	-1.1
1,212,474	-		OKGIIK_05525	0.83	-1.9
1,212,474	-		OKGIIK_05525	0.83	+0.4
1,212,474	-		OKGIIK_05525	0.83	-1.0
1,212,474	-		OKGIIK_05525	0.83	+1.7
1,212,474	-		OKGIIK_05525	0.83	+0.5
1,212,474	-		OKGIIK_05525	0.83	+0.4
1,212,474	-		OKGIIK_05525	0.83	+0.0
1,212,474	-		OKGIIK_05525	0.83	+0.1
1,212,474	-		OKGIIK_05525	0.83	-0.8
1,212,474	-		OKGIIK_05525	0.83	+0.3
1,212,474	-		OKGIIK_05525	0.83	-0.9
1,212,474	-		OKGIIK_05525	0.83	+0.7
1,212,527	+		OKGIIK_05525	0.89	-0.3
1,212,548	+				+0.1
1,212,548	+				-0.5
1,212,548	+				-1.0
1,212,548	+				+1.7
1,212,548	+				-1.8
1,212,549	-				-0.9
1,212,621	+				-1.4
1,212,621	+				-1.5
1,212,622	-				+0.5
1,212,622	-				+1.1
1,212,622	-				+1.6
1,212,622	-				-1.1
1,212,641	+				+0.1
1,212,641	+				+0.7
1,212,641	+				-1.8
1,212,642	-				-0.0
1,212,642	-				+1.8
1,212,642	-				-0.4
1,213,223	+				+0.7
1,213,223	+				-0.3
1,213,226	+				-0.8
1,217,215	+				-0.5
1,217,215	+				+0.0
1,217,215	+				+1.1
1,217,216	-				-0.3
1,217,245	+				-0.5
1,217,245	+				-1.3
1,217,245	+				-1.3
1,217,245	+				+0.0
1,217,245	+				-0.2
1,217,245	+				+1.0
1,217,245	+				-2.1
1,217,245	+				-0.5
1,217,246	-				-0.4
1,217,246	-				+0.0
1,217,247	+				+0.5
1,217,248	-				-0.8
1,217,261	+				-0.1
1,217,288	+				-0.3
1,217,288	+				-2.1
1,217,288	+				-1.1
1,217,288	+				-1.8
1,217,288	+				-0.5
1,217,288	+				+0.2
1,217,288	+				-0.5
1,217,288	+				-1.0
1,217,288	+				+0.0
1,217,289	-				-1.3
1,217,289	-				+0.3
1,217,289	-				-0.9
1,217,289	-				-1.3
1,217,289	-				+0.0
1,217,325	+				+0.2
1,217,325	+				+0.5
1,217,325	+				+0.9
1,217,325	+				+2.0
1,217,325	+				-0.8
1,217,325	+				+0.2
1,217,325	+				-0.4
1,217,326	-				-0.5
1,217,336	+				-0.3
1,217,336	+				+0.5
1,217,336	+				-0.3
1,217,337	-				+0.6
1,217,337	-				-0.1
1,217,337	-				-1.1
1,217,393	+				-2.4
1,217,393	+				-0.0
1,217,393	+				+0.8
1,217,393	+				+0.1
1,217,394	-				+0.3
1,217,394	-				-1.8
1,217,394	-				+0.5
1,217,394	-				+0.7
1,217,394	-				+0.6
1,217,394	-				+1.7
1,217,423	-				-0.1
1,217,423	-				-1.4
1,217,486	+				+0.4
1,217,486	+				+1.0
1,217,486	+				+0.7
1,217,486	+				+0.3
1,217,486	+				+1.4
1,217,486	+				-0.4
1,217,486	+				-2.1
1,217,486	+				+0.7
1,217,486	+				+0.8
1,217,486	+				+1.6
1,217,486	+				-0.3
1,217,487	-				+0.2
1,217,487	-				+0.9
1,217,487	-				-0.1
1,217,487	-				-0.3
1,217,487	-				-0.4
1,217,487	-				-1.8
1,217,487	-				-1.5
1,217,487	-				+3.2
1,217,487	-				-0.8
1,217,487	-				+0.5
1,217,487	-				-0.7
1,217,487	-				+0.4
1,217,487	-				-2.0
1,217,506	+				+0.8
1,217,506	+				+0.0
1,217,506	+				+0.2
1,217,506	+				-1.0
1,217,507	-				+1.0
1,217,507	-				-1.4
1,217,507	-				-2.5
1,217,507	-				+0.0
1,217,527	-				-0.8
1,217,545	+				-1.0
1,217,545	+				+1.0
1,217,546	-				-0.3
1,217,594	+				-1.1
1,217,595	-				-0.4
1,217,597	+				+0.3
1,217,597	+				-0.5
1,217,597	+				+0.2
1,217,597	+				-0.5
1,217,597	+				-0.8
1,217,597	+				-1.4
1,217,598	-				+2.2
1,217,598	-				+0.6
1,217,598	-				+1.1
1,217,598	-				-0.7
1,217,598	-				+0.5
1,217,598	-				-0.5
1,217,598	-				-2.0
1,217,616	+				+0.0
1,217,616	+				+0.2
1,217,616	+				-0.8
1,217,616	+				+0.6
1,217,617	-				-0.7
1,217,617	-				-0.1
1,217,617	-				+0.5
1,217,617	-				-1.1
1,217,617	-				-1.8
1,217,617	-				-0.5
1,217,617	-				+0.0
1,217,617	-				+1.5
1,217,617	-				+1.0
1,217,617	-				-1.0
1,217,617	-				-0.3
1,217,641	+				+0.7
1,217,697	+				-0.6
1,217,697	+				+0.0
1,217,697	+				-0.3
1,217,697	+				+0.6
1,217,697	+				+0.2
1,217,697	+				-0.0
1,217,697	+				-1.8
1,217,697	+				-1.1
1,217,698	-				-0.5
1,217,698	-				-0.8
1,217,698	-				+0.0
1,217,698	-				-2.3
1,217,698	-				+0.2
1,217,698	-				-0.5
1,217,698	-				-0.4
1,217,698	-				-0.2
1,217,698	-				+0.0
1,217,698	-				+1.0
1,217,698	-				+1.6
1,217,698	-				-1.7
1,217,698	-				+0.7
1,217,730	+				-1.1
1,217,730	+				+0.2
1,217,730	+				-0.8
1,217,730	+				-0.3
1,217,731	-				+0.9
1,217,731	-				+0.1
1,217,731	-				+0.3
1,217,754	+				+0.3
1,217,754	+				+0.3
1,217,754	+				-0.4
1,217,754	+				+0.0
1,217,754	+				+0.7
1,217,754	+				+0.0
1,217,754	+				-0.5
1,217,754	+				-0.7
1,217,755	-				+0.5
1,217,755	-				-1.0
1,217,755	-				+1.0
1,217,755	-				+1.9
1,217,755	-				-1.3
1,217,755	-				-0.3
1,217,755	-				-1.2
1,217,755	-				-1.1
1,217,755	-				+0.5
1,217,755	-				+0.8
1,217,755	-				+0.1
1,217,755	-				-0.3
1,217,755	-				+0.0
1,217,755	-				+0.9
1,217,788	+				-0.5
1,217,788	+				-0.3
1,217,788	+				-1.9
1,217,788	+				-0.3
1,217,788	+				-0.1
1,217,788	+				+0.3
1,217,789	-				-1.4
1,217,789	-				-0.1
1,217,789	-				+0.0
1,217,789	-				-1.1
1,217,789	-				+0.0
1,217,789	-				-0.8
1,217,858	+				-0.2
1,217,858	+				-0.5
1,217,859	-				+0.3
1,217,859	-				-0.0
1,217,909	+				-0.0
1,217,909	+				+0.0
1,217,909	+				+0.7
1,217,910	-				+0.7
1,217,910	-				-1.0
1,217,910	-				+0.5
1,217,963	+				+0.0
1,217,963	+				-1.9
1,218,044	+				+0.2
1,218,045	-				-0.5
1,218,051	+				-0.5
1,218,052	-				+0.0
1,218,134	+		OKGIIK_05540	0.18	+0.8
1,218,134	+		OKGIIK_05540	0.18	+1.6
1,218,134	+		OKGIIK_05540	0.18	+0.8
1,218,135	-		OKGIIK_05540	0.18	+0.7
1,218,135	-		OKGIIK_05540	0.18	+0.3
1,218,137	+		OKGIIK_05540	0.18	+1.8
1,218,138	-		OKGIIK_05540	0.19	-0.5
1,218,138	-		OKGIIK_05540	0.19	+0.6
1,218,138	-		OKGIIK_05540	0.19	+0.0
1,218,138	-		OKGIIK_05540	0.19	-1.5
1,218,194	+		OKGIIK_05540	0.32	-0.5
1,218,194	+		OKGIIK_05540	0.32	-0.3
1,218,194	+		OKGIIK_05540	0.32	-1.5
1,218,194	+		OKGIIK_05540	0.32	-0.8
1,218,194	+		OKGIIK_05540	0.32	-1.8
1,218,195	-		OKGIIK_05540	0.32	-1.5
1,218,195	-		OKGIIK_05540	0.32	+0.3
1,218,195	-		OKGIIK_05540	0.32	+1.0
1,218,195	-		OKGIIK_05540	0.32	-0.6
1,218,195	-		OKGIIK_05540	0.32	+1.2
1,218,212	-		OKGIIK_05540	0.36	-1.7
1,218,212	-		OKGIIK_05540	0.36	+2.4