Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_05135

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
1,109,849	+				-0.7
1,109,849	+				+0.6
1,109,850	-				-0.4
1,109,850	-				-1.2
1,109,850	-				-0.7
1,109,850	-				+0.6
1,109,905	+				-0.4
1,110,045	+		OKGIIK_05130	0.16	+1.4
1,110,045	+		OKGIIK_05130	0.16	-0.9
1,110,045	+		OKGIIK_05130	0.16	+0.9
1,110,045	+		OKGIIK_05130	0.16	-0.5
1,110,046	-		OKGIIK_05130	0.16	-1.2
1,110,046	-		OKGIIK_05130	0.16	-1.7
1,110,046	-		OKGIIK_05130	0.16	+1.0
1,110,046	-		OKGIIK_05130	0.16	-0.9
1,110,046	-		OKGIIK_05130	0.16	+1.6
1,110,106	+		OKGIIK_05130	0.28	-0.6
1,110,106	+		OKGIIK_05130	0.28	+0.4
1,110,106	+		OKGIIK_05130	0.28	-0.1
1,110,106	+		OKGIIK_05130	0.28	+0.6
1,110,106	+		OKGIIK_05130	0.28	-0.6
1,110,106	+		OKGIIK_05130	0.28	-0.9
1,110,106	+		OKGIIK_05130	0.28	-0.7
1,110,106	+		OKGIIK_05130	0.28	-1.0
1,110,106	+		OKGIIK_05130	0.28	+0.1
1,110,107	-		OKGIIK_05130	0.28	+0.6
1,110,107	-		OKGIIK_05130	0.28	-0.8
1,110,107	-		OKGIIK_05130	0.28	-0.9
1,110,107	-		OKGIIK_05130	0.28	-0.5
1,110,107	-		OKGIIK_05130	0.28	-1.5
1,110,107	-		OKGIIK_05130	0.28	-0.9
1,110,107	-		OKGIIK_05130	0.28	-2.2
1,110,107	-		OKGIIK_05130	0.28	-0.5
1,110,107	-		OKGIIK_05130	0.28	-0.2
1,110,108	+		OKGIIK_05130	0.28	-0.9
1,110,108	+		OKGIIK_05130	0.28	+0.3
1,110,108	+		OKGIIK_05130	0.28	-0.4
1,110,108	+		OKGIIK_05130	0.28	-0.7
1,110,108	+		OKGIIK_05130	0.28	-1.2
1,110,108	+		OKGIIK_05130	0.28	-0.7
1,110,108	+		OKGIIK_05130	0.28	-1.4
1,110,108	+		OKGIIK_05130	0.28	+1.6
1,110,108	+		OKGIIK_05130	0.28	+0.6
1,110,108	+		OKGIIK_05130	0.28	-0.3
1,110,108	+		OKGIIK_05130	0.28	-0.9
1,110,108	+		OKGIIK_05130	0.28	-0.2
1,110,108	+		OKGIIK_05130	0.28	-0.2
1,110,108	+		OKGIIK_05130	0.28	-0.1
1,110,108	+		OKGIIK_05130	0.28	-0.4
1,110,108	+		OKGIIK_05130	0.28	-0.9
1,110,108	+		OKGIIK_05130	0.28	+1.3
1,110,108	+		OKGIIK_05130	0.28	-0.4
1,110,108	+		OKGIIK_05130	0.28	+1.0
1,110,108	+		OKGIIK_05130	0.28	-1.2
1,110,108	+		OKGIIK_05130	0.28	-1.4
1,110,108	+		OKGIIK_05130	0.28	-0.5
1,110,108	+		OKGIIK_05130	0.28	-0.5
1,110,108	+		OKGIIK_05130	0.28	-0.4
1,110,108	+		OKGIIK_05130	0.28	-0.4
1,110,108	+		OKGIIK_05130	0.28	+1.6
1,110,108	+		OKGIIK_05130	0.28	-1.4
1,110,108	+		OKGIIK_05130	0.28	-1.8
1,110,108	+		OKGIIK_05130	0.28	-0.2
1,110,108	+		OKGIIK_05130	0.28	+0.1
1,110,108	+		OKGIIK_05130	0.28	+0.1
1,110,108	+		OKGIIK_05130	0.28	-1.3
1,110,108	+		OKGIIK_05130	0.28	+0.3
1,110,108	+		OKGIIK_05130	0.28	+0.1
1,110,108	+		OKGIIK_05130	0.28	-0.7
1,110,108	+		OKGIIK_05130	0.28	-1.4
1,110,108	+		OKGIIK_05130	0.28	-0.9
1,110,108	+		OKGIIK_05130	0.28	-0.5
1,110,108	+		OKGIIK_05130	0.28	-0.9
1,110,108	+		OKGIIK_05130	0.28	-0.4
1,110,108	+		OKGIIK_05130	0.28	+0.8
1,110,108	+		OKGIIK_05130	0.28	-0.9
1,110,108	+		OKGIIK_05130	0.28	-2.3
1,110,108	+		OKGIIK_05130	0.28	-0.5
1,110,108	+		OKGIIK_05130	0.28	+1.9
1,110,108	+		OKGIIK_05130	0.28	-1.5
1,110,108	+		OKGIIK_05130	0.28	-0.7
1,110,108	+		OKGIIK_05130	0.28	-1.5
1,110,108	+		OKGIIK_05130	0.28	+0.3
1,110,108	+		OKGIIK_05130	0.28	+0.1
1,110,108	+		OKGIIK_05130	0.28	+1.4
1,110,109	-		OKGIIK_05130	0.29	+1.6
1,110,109	-		OKGIIK_05130	0.29	-2.3
1,110,109	-		OKGIIK_05130	0.29	-1.4
1,110,109	-		OKGIIK_05130	0.29	-1.9
1,110,109	-		OKGIIK_05130	0.29	-0.6
1,110,109	-		OKGIIK_05130	0.29	-1.8
1,110,109	-		OKGIIK_05130	0.29	-0.8
1,110,109	-		OKGIIK_05130	0.29	-0.7
1,110,109	-		OKGIIK_05130	0.29	-1.2
1,110,109	-		OKGIIK_05130	0.29	-0.4
1,110,109	-		OKGIIK_05130	0.29	-0.3
1,110,109	-		OKGIIK_05130	0.29	+1.6
1,110,109	-		OKGIIK_05130	0.29	-0.9
1,110,109	-		OKGIIK_05130	0.29	-0.9
1,110,109	-		OKGIIK_05130	0.29	+0.7
1,110,109	-		OKGIIK_05130	0.29	+0.0
1,110,109	-		OKGIIK_05130	0.29	+0.8
1,110,109	-		OKGIIK_05130	0.29	+0.1
1,110,109	-		OKGIIK_05130	0.29	-0.7
1,110,109	-		OKGIIK_05130	0.29	-1.2
1,110,109	-		OKGIIK_05130	0.29	+1.9
1,110,109	-		OKGIIK_05130	0.29	-1.2
1,110,109	-		OKGIIK_05130	0.29	+0.3
1,110,109	-		OKGIIK_05130	0.29	+0.1
1,110,109	-		OKGIIK_05130	0.29	+0.6
1,110,109	-		OKGIIK_05130	0.29	+0.7
1,110,109	-		OKGIIK_05130	0.29	+0.6
1,110,109	-		OKGIIK_05130	0.29	-0.8
1,110,109	-		OKGIIK_05130	0.29	+0.6
1,110,109	-		OKGIIK_05130	0.29	+0.8
1,110,109	-		OKGIIK_05130	0.29	+0.6
1,110,109	-		OKGIIK_05130	0.29	+0.1
1,110,109	-		OKGIIK_05130	0.29	+0.1
1,110,109	-		OKGIIK_05130	0.29	-0.4
1,110,109	-		OKGIIK_05130	0.29	-0.9
1,110,109	-		OKGIIK_05130	0.29	+1.9
1,110,109	-		OKGIIK_05130	0.29	-0.3
1,110,193	-		OKGIIK_05130	0.46	-1.5
1,110,641	+				+0.2
1,110,641	+				-2.1
1,110,641	+				+0.9
1,110,641	+				-1.4
1,110,641	+				+0.4
1,110,641	+				+0.3
1,110,641	+				-0.9
1,110,642	-				-1.2
1,110,642	-				+1.9
1,110,642	-				-1.7
1,110,642	-				-0.9
1,110,650	+				-0.4
1,110,650	+				-0.7
1,110,650	+				-0.4
1,110,651	-				+0.9
1,110,651	-				-0.4
1,110,651	-				-0.4
1,110,929	+	mdlB	OKGIIK_05135	0.20	-1.4
1,110,929	+	mdlB	OKGIIK_05135	0.20	+0.6
1,110,930	-	mdlB	OKGIIK_05135	0.20	-0.4
1,110,968	+	mdlB	OKGIIK_05135	0.22	-1.5
1,110,968	+	mdlB	OKGIIK_05135	0.22	-0.4
1,110,969	-	mdlB	OKGIIK_05135	0.22	-0.7
1,110,969	-	mdlB	OKGIIK_05135	0.22	-0.8
1,110,969	-	mdlB	OKGIIK_05135	0.22	+0.4
1,111,052	+	mdlB	OKGIIK_05135	0.27	-0.4
1,111,052	+	mdlB	OKGIIK_05135	0.27	+0.3
1,111,052	+	mdlB	OKGIIK_05135	0.27	-0.7
1,111,052	+	mdlB	OKGIIK_05135	0.27	-1.6
1,111,053	-	mdlB	OKGIIK_05135	0.27	+0.1
1,111,053	-	mdlB	OKGIIK_05135	0.27	+0.9
1,111,053	-	mdlB	OKGIIK_05135	0.27	-0.4
1,111,053	-	mdlB	OKGIIK_05135	0.27	-2.5
1,111,053	-	mdlB	OKGIIK_05135	0.27	-0.4
1,111,053	-	mdlB	OKGIIK_05135	0.27	-2.2
1,111,053	-	mdlB	OKGIIK_05135	0.27	-1.2
1,111,064	+	mdlB	OKGIIK_05135	0.27	-2.9
1,111,064	+	mdlB	OKGIIK_05135	0.27	+0.3
1,111,064	+	mdlB	OKGIIK_05135	0.27	-1.4
1,111,064	+	mdlB	OKGIIK_05135	0.27	+0.2
1,111,065	-	mdlB	OKGIIK_05135	0.28	+0.2
1,111,065	-	mdlB	OKGIIK_05135	0.28	-0.9
1,111,065	-	mdlB	OKGIIK_05135	0.28	-0.9
1,111,065	-	mdlB	OKGIIK_05135	0.28	-1.7
1,111,065	-	mdlB	OKGIIK_05135	0.28	-1.7
1,111,065	-	mdlB	OKGIIK_05135	0.28	-0.4
1,111,142	+	mdlB	OKGIIK_05135	0.32	-0.4
1,111,142	+	mdlB	OKGIIK_05135	0.32	-0.4
1,111,142	+	mdlB	OKGIIK_05135	0.32	-1.9
1,111,142	+	mdlB	OKGIIK_05135	0.32	-0.7
1,111,143	-	mdlB	OKGIIK_05135	0.32	+1.6
1,111,143	-	mdlB	OKGIIK_05135	0.32	-0.4
1,111,143	-	mdlB	OKGIIK_05135	0.32	-0.7
1,111,143	-	mdlB	OKGIIK_05135	0.32	-1.2
1,111,144	+	mdlB	OKGIIK_05135	0.32	-1.8
1,111,145	-	mdlB	OKGIIK_05135	0.32	-1.1
1,111,241	+	mdlB	OKGIIK_05135	0.37	-1.8
1,111,242	-	mdlB	OKGIIK_05135	0.37	-0.1
1,111,242	-	mdlB	OKGIIK_05135	0.37	-1.8
1,111,242	-	mdlB	OKGIIK_05135	0.37	-0.7
1,111,242	-	mdlB	OKGIIK_05135	0.37	-0.4
1,111,295	+	mdlB	OKGIIK_05135	0.40	-1.3
1,111,295	+	mdlB	OKGIIK_05135	0.40	+0.6
1,111,295	+	mdlB	OKGIIK_05135	0.40	-1.1
1,111,295	+	mdlB	OKGIIK_05135	0.40	+0.2
1,111,295	+	mdlB	OKGIIK_05135	0.40	-0.6
1,111,295	+	mdlB	OKGIIK_05135	0.40	-0.9
1,111,295	+	mdlB	OKGIIK_05135	0.40	-0.7
1,111,296	-	mdlB	OKGIIK_05135	0.40	-1.7
1,111,296	-	mdlB	OKGIIK_05135	0.40	-0.7
1,111,296	-	mdlB	OKGIIK_05135	0.40	+0.2
1,111,296	-	mdlB	OKGIIK_05135	0.40	-0.4
1,111,296	-	mdlB	OKGIIK_05135	0.40	-0.3
1,111,296	-	mdlB	OKGIIK_05135	0.40	+0.1
1,111,296	-	mdlB	OKGIIK_05135	0.40	-1.9
1,111,296	-	mdlB	OKGIIK_05135	0.40	-0.4
1,111,396	+	mdlB	OKGIIK_05135	0.45	-0.4
1,111,396	+	mdlB	OKGIIK_05135	0.45	-1.1
1,111,667	+	mdlB	OKGIIK_05135	0.60	-0.8
1,111,667	+	mdlB	OKGIIK_05135	0.60	-0.2
1,111,667	+	mdlB	OKGIIK_05135	0.60	-1.5
1,111,790	+	mdlB	OKGIIK_05135	0.67	-0.6
1,111,790	+	mdlB	OKGIIK_05135	0.67	-0.9
1,111,928	+	mdlB	OKGIIK_05135	0.74	+0.9
1,111,929	-	mdlB	OKGIIK_05135	0.74	-0.7
1,111,929	-	mdlB	OKGIIK_05135	0.74	+0.5
1,111,929	-	mdlB	OKGIIK_05135	0.74	-1.7
1,111,929	-	mdlB	OKGIIK_05135	0.74	-1.4
1,111,929	-	mdlB	OKGIIK_05135	0.74	-0.5
1,112,339	+				-0.4
1,112,339	+				-1.7
1,112,340	-				-0.7
1,112,340	-				-0.9
1,112,389	+				+0.0
1,112,389	+				-0.5
1,112,389	+				-1.2
1,112,390	-				-2.4
1,112,390	-				-1.0
1,112,390	-				-1.0
1,112,390	-				-1.4
1,112,390	-				-2.8
1,112,390	-				-1.5
1,112,390	-				-1.0
1,112,399	+				+1.0
1,112,400	-				-1.7
1,112,400	-				-0.4
1,112,514	+				-1.5
1,112,515	-				+1.3
1,112,583	+		OKGIIK_05140	0.26	-0.6
1,112,583	+		OKGIIK_05140	0.26	-1.0
1,112,583	+		OKGIIK_05140	0.26	-0.4
1,112,583	+		OKGIIK_05140	0.26	+1.0
1,112,583	+		OKGIIK_05140	0.26	-0.7
1,112,583	+		OKGIIK_05140	0.26	-1.0
1,112,584	-		OKGIIK_05140	0.27	-1.0
1,112,584	-		OKGIIK_05140	0.27	-0.4
1,112,584	-		OKGIIK_05140	0.27	+0.6
1,112,584	-		OKGIIK_05140	0.27	+1.2
1,112,584	-		OKGIIK_05140	0.27	-0.8
1,112,584	-		OKGIIK_05140	0.27	-0.4
1,112,584	-		OKGIIK_05140	0.27	-1.4
1,112,584	-		OKGIIK_05140	0.27	+0.6
1,112,619	+		OKGIIK_05140	0.36	+0.3
1,112,619	+		OKGIIK_05140	0.36	-1.2
1,112,619	+		OKGIIK_05140	0.36	-1.8
1,112,619	+		OKGIIK_05140	0.36	-0.4
1,112,619	+		OKGIIK_05140	0.36	-0.7
1,112,619	+		OKGIIK_05140	0.36	-1.2
1,112,619	+		OKGIIK_05140	0.36	+0.6
1,112,619	+		OKGIIK_05140	0.36	-0.4
1,112,619	+		OKGIIK_05140	0.36	-1.0
1,112,620	-		OKGIIK_05140	0.36	-0.4
1,112,620	-		OKGIIK_05140	0.36	-1.0
1,112,620	-		OKGIIK_05140	0.36	-0.4
1,112,620	-		OKGIIK_05140	0.36	-0.7
1,112,620	-		OKGIIK_05140	0.36	-0.4
1,112,706	+		OKGIIK_05140	0.59	-1.2
1,112,706	+		OKGIIK_05140	0.59	-1.4
1,112,706	+		OKGIIK_05140	0.59	-2.2
1,112,706	+		OKGIIK_05140	0.59	+0.4
1,112,706	+		OKGIIK_05140	0.59	-0.4
1,112,707	-		OKGIIK_05140	0.59	+0.4
1,112,707	-		OKGIIK_05140	0.59	+0.0
1,112,707	-		OKGIIK_05140	0.59	-0.3
1,112,767	-		OKGIIK_05140	0.75	-1.0
1,112,877	+				+0.5
1,112,877	+				+0.4
1,112,877	+				-0.2
1,112,877	+				+0.0
1,112,877	+				-1.1
1,112,877	+				-1.0
1,112,877	+				+0.8
1,112,877	+				-0.7
1,112,877	+				-1.4
1,112,878	-				-1.5
1,112,878	-				-0.2
1,112,878	-				-0.4
1,112,995	+				-1.3
1,112,995	+				+1.0
1,112,996	-				+0.1
1,112,996	-				+0.9
1,113,033	+				-0.5
1,113,033	+				+0.0
1,113,033	+				-0.4
1,113,033	+				-0.2
1,113,033	+				+0.4
1,113,033	+				-1.2
1,113,033	+				-0.7
1,113,033	+				-0.8
1,113,034	-				+0.5
1,113,034	-				+0.4
1,113,034	-				-1.4
1,113,034	-				+0.0
1,113,076	+				+0.3
1,113,076	+				+0.3
1,113,076	+				-2.9
1,113,076	+				-1.4
1,113,076	+				-1.2
1,113,076	+				+0.5
1,113,077	-				-0.7
1,113,077	-				-0.4
1,113,077	-				+0.2
1,113,077	-				-0.9
1,113,077	-				-0.4
1,113,077	-				-0.4
1,113,077	-				-2.5
1,113,077	-				+0.0
1,113,161	-		OKGIIK_05145	0.11	+0.9
1,113,400	+		OKGIIK_05145	0.26	-0.4
1,113,400	+		OKGIIK_05145	0.26	-1.5
1,113,401	-		OKGIIK_05145	0.26	-0.4
1,113,401	-		OKGIIK_05145	0.26	+0.9
1,113,401	-		OKGIIK_05145	0.26	-0.4